RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	PPFIA3	O75145	1194 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	LIG1	P18858	919 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	ATP2B4	P23634	1241 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	GUCY1B3	Q02153	619 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	NTRK3	Q16288	839 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	PLCD3	Q8N3E9	789 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	SUPT20H	Q8NEM7	779 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	FBXO18	Q8NFZ0	1043 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	WDR66	Q8TBY9	1149 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	C8orf76	Q96K31	380 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	ZNF396	Q96N95	335 aa	Predicted RBP	13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	ECM29	Q5VYK3	1845 aa		13.13	□□□□□ -0.31
GFAP-238	ENST00000640859	KIF13B	Q9NQT8	1826 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	GOLGA8A	A7E2F4	631 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	CDKL5	O76039	1030 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	PRDX5	P30044	214 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	CCDC173	Q0VFZ6	552 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	RRP12	Q5JTH9	1297 aa	Known RBP	13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	OTUD7B	Q6GQQ9	843 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	CTR9	Q6PD62	1173 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	CPLX2	Q6PUV4	134 aa	Known RBP	13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	NFXL1	Q6ZNB6	911 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	TMTC2	Q8N394	836 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	FUCA2	Q9BTY2	467 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	ANKRD31	Q8N7Z5	1873 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	STK36	Q9NRP7	1315 aa		13.12	□□□□□ -0.31
GFAP-238	ENST00000640859	DUOX1	Q9NRD9	1551 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	LRRC37A	A6NMS7	1700 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	CCDC69	A6NI79	296 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	SMIM22	K7EJ46	135 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	PC	P11498	1178 aa	Known RBP	13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	RCAN1	P53805	252 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	WTAP	Q15007	396 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	SART3	Q15020	963 aa	Known RBP	13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	SEC23A	Q15436	765 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	TPRN	Q4KMQ1	711 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	SBK1	Q52WX2	424 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	ZNF804A	Q7Z570	1209 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	USP28	Q96RU2	1077 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	TAOK3	Q9H2K8	898 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	ATP8A2	Q9NTI2	1148 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	PODXL2	Q9NZ53	605 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	ATP6V0A2	Q9Y487	856 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	SLC12A7	Q9Y666	1083 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	LAMB1	P07942	1786 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	DLEC1	Q9Y238	1755 aa		13.11	□□□□□ -0.31
GFAP-238	ENST00000640859	CYP2D7	A0A087X1C5	515 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	GOLGA6L4	A6NEF3	574 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	USP17L12	C9JPN9	530 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	USP17L21	D6R901	530 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	RANBP6	O60518	1105 aa	Known RBP	13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	RXRA	P19793	462 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	DPP8	Q6V1X1	898 aa	Predicted RBP	13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	SYNE3	Q6ZMZ3	975 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	BRAP	Q7Z569	592 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	MICU3	Q86XE3	530 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	SP8	Q8IXZ3	490 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	ESR2	Q92731	530 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	GPR101	Q96P66	508 aa	Predicted RBP	13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	ALG1	Q9BT22	464 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	MYL10	Q9BUA6	226 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	TOMM22	Q9NS69	142 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	RTEL1	Q9NZ71	1219 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	GGA1	Q9UJY5	639 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	LTBP1	Q14766	1721 aa		13.1	□□□□□ -0.31
GFAP-238	ENST00000640859	ERICH2	A1L162	156 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859		G3V3G9	751 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	ORC4	O43929	436 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	UFL1	O94874	794 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	FMNL1	O95466	1100 aa	Predicted RBP	13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	LDHB	P07195	334 aa	Known RBP	13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	IL1R1	P14778	569 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	YBX3	P16989	372 aa	Known RBP eCLIP	13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	IFNAR1	P17181	557 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	IARS	P41252	1262 aa	Known RBP	13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	PPP4C	P60510	307 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	GSTO1	P78417	241 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	KIF23	Q02241	960 aa	Predicted RBP	13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	UVSSA	Q2YD98	709 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	DCAF8	Q5TAQ9	597 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	DZIP1	Q86YF9	867 aa	Known RBP	13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	CCDC144CP	Q8IYA2	1237 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	STK11IP	Q8N1F8	1099 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	MPND	Q8N594	471 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	EYA3	Q99504	573 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	ZKSCAN3	Q9BRR0	538 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	CLSTN2	Q9H4D0	955 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	CD209	Q9NNX6	404 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	DDX19A	Q9NUU7	478 aa	Known RBP	13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	JAG2	Q9Y219	1238 aa		13.09	□□□□□ -0.31
GFAP-238	ENST00000640859	KIF28P	B7ZC32	967 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	PRR29	P0C7W0	189 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	SSRP1	Q08945	709 aa	Known RBP	13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	GRIK5	Q16478	980 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	RTN1	Q16799	776 aa		13.08	□□□□□ -0.32
GFAP-238	ENST00000640859	KRT40	Q6A162	431 aa		13.08	□□□□□ -0.32

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