RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 LOC285556D6RIA3 1793 aa24.28■■□□□ 1.48
GABRD-216ENST00000640688 COL2A1P02458 1487 aaPredicted RBP24.27■■□□□ 1.48
GABRD-216ENST00000640688 ELNP15502 786 aa24.27■■□□□ 1.48
GABRD-216ENST00000640688 GJA8P48165 433 aa24.27■■□□□ 1.48
GABRD-216ENST00000640688 FLT3LGP49771 235 aa24.27■■□□□ 1.48
GABRD-216ENST00000640688 SPP2Q13103 211 aa24.27■■□□□ 1.48
GABRD-216ENST00000640688 POLA2Q14181 598 aa24.27■■□□□ 1.48
GABRD-216ENST00000640688 TEX11Q8IYF3 940 aa24.27■■□□□ 1.48
GABRD-216ENST00000640688 ANKRD13CQ8N6S4 541 aa24.27■■□□□ 1.48
GABRD-216ENST00000640688 SMCR8Q8TEV9 937 aaPredicted RBP24.27■■□□□ 1.48
GABRD-216ENST00000640688 UNC93B1Q9H1C4 597 aa24.27■■□□□ 1.48
GABRD-216ENST00000640688 GJB1P08034 283 aa24.26■■□□□ 1.47
GABRD-216ENST00000640688 UQCRFS1P1P0C7P4 283 aa24.26■■□□□ 1.47
GABRD-216ENST00000640688 FXR1P51114 621 aaKnown RBP eCLIP24.26■■□□□ 1.47
GABRD-216ENST00000640688 TNNI3KQ59H18 835 aa24.26■■□□□ 1.47
GABRD-216ENST00000640688 UBE2Q1Q7Z7E8 422 aa24.26■■□□□ 1.47
GABRD-216ENST00000640688 ADGRA1Q86SQ6 560 aa24.26■■□□□ 1.47
GABRD-216ENST00000640688 SLAIN1Q8ND83 568 aa24.26■■□□□ 1.47
GABRD-216ENST00000640688 AATFQ9NY61 560 aaKnown RBP eCLIP24.26■■□□□ 1.47
GABRD-216ENST00000640688 FPGT-TNNI3KV9GXZ4 949 aa24.26■■□□□ 1.47
GABRD-216ENST00000640688 MAST2Q6P0Q8 1798 aa24.26■■□□□ 1.47
GABRD-216ENST00000640688 ADCY3O60266 1144 aa24.25■■□□□ 1.47
GABRD-216ENST00000640688 ZKSCAN2Q63HK3 967 aa24.25■■□□□ 1.47
GABRD-216ENST00000640688 SZT2Q5T011 3432 aa24.25■■□□□ 1.47
GABRD-216ENST00000640688 TNPO2O14787 897 aaKnown RBP24.24■■□□□ 1.47
GABRD-216ENST00000640688 MAP4K4O95819 1239 aaPredicted RBP24.24■■□□□ 1.47
GABRD-216ENST00000640688 CYP2E1P05181 493 aaPredicted RBP24.24■■□□□ 1.47
GABRD-216ENST00000640688 CAP2P40123 477 aa24.24■■□□□ 1.47
GABRD-216ENST00000640688 HMGCS2P54868 508 aa24.24■■□□□ 1.47
GABRD-216ENST00000640688 UBXN2AP68543 259 aa24.24■■□□□ 1.47
GABRD-216ENST00000640688 JAG1P78504 1218 aa24.24■■□□□ 1.47
GABRD-216ENST00000640688 TTC39AQ5SRH9 613 aa24.24■■□□□ 1.47
GABRD-216ENST00000640688 ZNF280CQ8ND82 737 aa24.24■■□□□ 1.47
GABRD-216ENST00000640688 SSH3Q8TE77 659 aa24.24■■□□□ 1.47
GABRD-216ENST00000640688 RANBP2P49792 3224 aaKnown RBP24.23■■□□□ 1.47
GABRD-216ENST00000640688 ATP8B2P98198 1209 aa24.23■■□□□ 1.47
GABRD-216ENST00000640688 SHROOM1Q2M3G4 852 aaPredicted RBP24.23■■□□□ 1.47
GABRD-216ENST00000640688 NKX2-3Q8TAU0 364 aa24.23■■□□□ 1.47
GABRD-216ENST00000640688 U2AF1L4Q8WU68 220 aaKnown RBP24.23■■□□□ 1.47
GABRD-216ENST00000640688 FOCADQ5VW36 1801 aa24.23■■□□□ 1.47
GABRD-216ENST00000640688 INHAP05111 366 aa24.22■■□□□ 1.47
GABRD-216ENST00000640688 NAA16Q6N069 864 aaPredicted RBP24.22■■□□□ 1.47
GABRD-216ENST00000640688 PROCA1Q8NCQ7 364 aaPredicted RBP24.22■■□□□ 1.47
GABRD-216ENST00000640688 DPF3Q92784 378 aa24.22■■□□□ 1.47
GABRD-216ENST00000640688 DNAJC18Q9H819 358 aa24.22■■□□□ 1.47
GABRD-216ENST00000640688 GPR108Q9NPR9 543 aa24.22■■□□□ 1.47
GABRD-216ENST00000640688 TLR7Q9NYK1 1049 aaKnown RBP24.22■■□□□ 1.47
GABRD-216ENST00000640688 TRIOBPQ9H2D6 2365 aa24.22■■□□□ 1.47
GABRD-216ENST00000640688 SURF6O75683 361 aaKnown RBP24.21■■□□□ 1.47
GABRD-216ENST00000640688 RLBP1P12271 317 aa24.21■■□□□ 1.47
GABRD-216ENST00000640688 ZAP70P43403 619 aa24.21■■□□□ 1.47
GABRD-216ENST00000640688 OS9Q13438 667 aaPredicted RBP24.21■■□□□ 1.47
GABRD-216ENST00000640688 MAPKAPK5Q8IW41 473 aa24.21■■□□□ 1.47
GABRD-216ENST00000640688 TGFBRAP1Q8WUH2 860 aa24.21■■□□□ 1.47
GABRD-216ENST00000640688 PIH1D3Q9NQM4 214 aaKnown RBP24.21■■□□□ 1.47
GABRD-216ENST00000640688 TAOK2Q9UL54 1235 aa24.21■■□□□ 1.47
GABRD-216ENST00000640688 FLT1P17948 1338 aa24.2■■□□□ 1.46
GABRD-216ENST00000640688 USP17L5A8MUK1 530 aa24.2■■□□□ 1.46
GABRD-216ENST00000640688 IRF5Q13568 498 aa24.2■■□□□ 1.46
GABRD-216ENST00000640688 FAM110CQ1W6H9 321 aa24.2■■□□□ 1.46
GABRD-216ENST00000640688 CCDC158Q5M9N0 1113 aa24.2■■□□□ 1.46
GABRD-216ENST00000640688 PI4KBQ9UBF8 816 aa24.2■■□□□ 1.46
GABRD-216ENST00000640688 HERC5Q9UII4 1024 aaKnown RBP24.2■■□□□ 1.46
GABRD-216ENST00000640688 SGPL1O95470 568 aa24.19■■□□□ 1.46
GABRD-216ENST00000640688 PPP4CP60510 307 aa24.19■■□□□ 1.46
GABRD-216ENST00000640688 CHRDL2Q6WN34 429 aa24.19■■□□□ 1.46
GABRD-216ENST00000640688 PXYLP1Q8TE99 480 aa24.19■■□□□ 1.46
GABRD-216ENST00000640688 NOL10Q9BSC4 688 aaKnown RBP24.19■■□□□ 1.46
GABRD-216ENST00000640688 ASCC2Q9H1I8 757 aaPredicted RBP24.19■■□□□ 1.46
GABRD-216ENST00000640688 DBNLQ9UJU6 430 aaKnown RBP24.19■■□□□ 1.46
GABRD-216ENST00000640688 PNMA3Q9UL41 463 aa24.19■■□□□ 1.46
GABRD-216ENST00000640688 PEX10O60683 326 aa24.18■■□□□ 1.46
GABRD-216ENST00000640688 DYNLL1P63167 89 aaKnown RBP24.18■■□□□ 1.46
GABRD-216ENST00000640688 SH3D19Q5HYK7 790 aa24.18■■□□□ 1.46
GABRD-216ENST00000640688 CCDC8Q9H0W5 538 aaPredicted RBP24.18■■□□□ 1.46
GABRD-216ENST00000640688 PALD1Q9ULE6 856 aa24.18■■□□□ 1.46
GABRD-216ENST00000640688 PLXNB2O15031 1838 aa24.17■■□□□ 1.46
GABRD-216ENST00000640688 ZBTB7BO15156 539 aaPredicted RBP24.17■■□□□ 1.46
GABRD-216ENST00000640688 FARP2O94887 1054 aaPredicted RBP24.17■■□□□ 1.46
GABRD-216ENST00000640688 BAG3O95817 575 aa24.17■■□□□ 1.46
GABRD-216ENST00000640688 MTMR2Q13614 643 aa24.17■■□□□ 1.46
GABRD-216ENST00000640688 COA7Q96BR5 231 aa24.17■■□□□ 1.46
GABRD-216ENST00000640688 DEFB118Q96PH6 123 aa24.17■■□□□ 1.46
GABRD-216ENST00000640688 DHX36Q9H2U1 1008 aaKnown RBP24.17■■□□□ 1.46
GABRD-216ENST00000640688 SAP30BPQ9UHR5 308 aaKnown RBP24.17■■□□□ 1.46
GABRD-216ENST00000640688 NDUFB9Q9Y6M9 179 aa24.17■■□□□ 1.46
GABRD-216ENST00000640688 GDF11O95390 407 aa24.16■■□□□ 1.46
GABRD-216ENST00000640688 ITPRIPQ8IWB1 547 aa24.16■■□□□ 1.46
GABRD-216ENST00000640688 EAF2Q96CJ1 260 aaPredicted RBP24.16■■□□□ 1.46
GABRD-216ENST00000640688 ZNF512BQ96KM6 892 aaPredicted RBP24.16■■□□□ 1.46
GABRD-216ENST00000640688 TBC1D2Q9BYX2 928 aa24.16■■□□□ 1.46
GABRD-216ENST00000640688 NOP58Q9Y2X3 529 aaKnown RBP24.16■■□□□ 1.46
GABRD-216ENST00000640688 HNRNPUQ00839 825 aaKnown RBP eCLIP24.15■■□□□ 1.46
GABRD-216ENST00000640688 METTL16Q86W50 562 aaKnown RBP24.15■■□□□ 1.46
GABRD-216ENST00000640688 FTSJ3Q8IY81 847 aaKnown RBP24.15■■□□□ 1.46
GABRD-216ENST00000640688 WDR18Q9BV38 432 aa24.15■■□□□ 1.46
GABRD-216ENST00000640688 AS3MTQ9HBK9 375 aa24.15■■□□□ 1.46
GABRD-216ENST00000640688 PAK6Q9NQU5 681 aaPredicted RBP24.15■■□□□ 1.46
GABRD-216ENST00000640688 RBM27Q9P2N5 1060 aaKnown RBP24.15■■□□□ 1.46
GABRD-216ENST00000640688 GJD2Q9UKL4 321 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms