RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 USP17L21D6R901 530 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 USP17L8P0C7I0 530 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 CYP2D6P10635 497 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 CACNB3P54284 484 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 HDLBPQ00341 1268 aaKnown RBP10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 TNIP1Q15025 636 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 CTR9Q6PD62 1173 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 AGBL3Q8NEM8 1001 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 NKX2-3Q8TAU0 364 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 MRIQ9BWK5 157 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 RNF181Q9P0P0 153 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 SBF1O95248 1867 aa10.8□□□□□ -0.68
HNRNPU-218ENST00000639064 PICALMQ13492 652 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 MTERF4Q7Z6M4 381 aaKnown RBP10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 OGFOD1Q8N543 542 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 NEK1Q96PY6 1258 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 MCM9Q9NXL9 1143 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 SAP30BPQ9UHR5 308 aaKnown RBP10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 TCHHQ07283 1943 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 WDHD1O75717 1129 aaPredicted RBP10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 PLCG2P16885 1265 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 GMPSP49915 693 aaPredicted RBP10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 PPARAQ07869 468 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 NFIAQ12857 509 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 GIMAP6Q6P9H5 292 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 TDRD3Q9H7E2 651 aaKnown RBP10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 DDX4Q9NQI0 724 aaKnown RBP10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 PRDM10Q9NQV6 1147 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 FLT1P17948 1338 aa10.79□□□□□ -0.68
HNRNPU-218ENST00000639064 CDK5RAP2Q96SN8 1893 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 MCM2P49736 904 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 KRT32Q14532 448 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 C9orf131Q5VYM1 1079 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 RUFY3Q7L099 469 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 CHST3Q7LGC8 479 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 TSC1Q92574 1164 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 SYAP1Q96A49 352 aaPredicted RBP10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 ZNF830Q96NB3 372 aaPredicted RBP10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 LARP6Q9BRS8 491 aaKnown RBP10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 TM6SF1Q9BZW5 370 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 HDAC9Q9UKV0 1011 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 EGFRP00533 1210 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 PSMA5P28066 241 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 BLOC1S2Q6QNY1 142 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 CERS3Q8IU89 383 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 SMAP1Q8IYB5 467 aaPredicted RBP10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 CYP46A1Q9Y6A2 500 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 NEDD4P46934 1319 aa10.78□□□□□ -0.68
HNRNPU-218ENST00000639064 DICER1Q9UPY3 1922 aaKnown RBP10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 LAMA4Q16363 1823 aa10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 SPDYE2BA6NHP3 402 aa10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 SPDYE6P0CI01 402 aa10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 PLCD1P51178 756 aa10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 DLGAP5Q15398 846 aa10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 C17orf53Q8N3J3 647 aaPredicted RBP10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 MYRIPQ8NFW9 859 aa10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 TTC14Q96N46 770 aa10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.68
HNRNPU-218ENST00000639064 CLRN2A0PK11 232 aa10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 RPS6KB1P23443 525 aa10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 DNTTIP2Q5QJE6 756 aaKnown RBP10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 RBM26Q5T8P6 1007 aaKnown RBP10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 USP48Q86UV5 1035 aa10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 ZFPM1Q8IX07 1006 aa10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 ARPP21Q9UBL0 812 aaPredicted RBP10.77□□□□□ -0.69
HNRNPU-218ENST00000639064 B4E1Z4 1266 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 PRDM1O75626 825 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 AK2P54819 239 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 TCP10Q12799 353 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 AKNAD1Q5T1N1 836 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 C12orf60Q5U649 245 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 INTS4Q96HW7 963 aaKnown RBP10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 MYOZ2Q9NPC6 264 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 TOMM22Q9NS69 142 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 USP25Q9UHP3 1055 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 CNOT7Q9UIV1 285 aaKnown RBP10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 ANAPC4Q9UJX5 808 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 NAV1Q8NEY1 1877 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 DDNO94850 711 aaPredicted RBP10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 POLR3DP05423 398 aaPredicted RBP10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 RPS12P25398 132 aaKnown RBP10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 NBPF9Q3BBW0 867 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 SBK1Q52WX2 424 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 RRP12Q5JTH9 1297 aaKnown RBP10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 MFSD6Q6ZSS7 791 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 NCOA7Q8NI08 942 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 STAG1Q8WVM7 1258 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 DYNLL2Q96FJ2 89 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 FAM198AQ9UFP1 575 aa10.76□□□□□ -0.69
HNRNPU-218ENST00000639064 WNT10BO00744 389 aa10.75□□□□□ -0.69
HNRNPU-218ENST00000639064 ZNF280AP59817 542 aaPredicted RBP10.75□□□□□ -0.69
HNRNPU-218ENST00000639064 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
HNRNPU-218ENST00000639064 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
HNRNPU-218ENST00000639064 MB21D2Q8IYB1 491 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms