RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 LACTBP83111 547 aaPredicted RBP9.62□□□□□ -0.87
PNKP-229ENST00000637897 TTC39AQ5SRH9 613 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 GORABQ5T7V8 394 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 OTUD7BQ6GQQ9 843 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 RHPN1Q8TCX5 695 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 HOOK2Q96ED9 719 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 EDC3Q96F86 508 aaKnown RBP9.62□□□□□ -0.87
PNKP-229ENST00000637897 ERO1AQ96HE7 468 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 EFCC1Q9HA90 598 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 PPP4R2Q9NY27 417 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 RCAN3Q9UKA8 241 aa9.62□□□□□ -0.87
PNKP-229ENST00000637897 ATAD5Q96QE3 1844 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 FLT1P17948 1338 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 SMIM22K7EJ46 135 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 TREML2Q5T2D2 321 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 NAA16Q6N069 864 aaPredicted RBP9.61□□□□□ -0.87
PNKP-229ENST00000637897 AACSQ86V21 672 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 MAPKAPK5Q8IW41 473 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 TEX11Q8IYF3 940 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 TGFBRAP1Q8WUH2 860 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 ZNF333Q96JL9 665 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 RIOK1Q9BRS2 568 aaKnown RBP9.61□□□□□ -0.87
PNKP-229ENST00000637897 LRP2BPQ9P2M1 347 aa9.61□□□□□ -0.87
PNKP-229ENST00000637897 DDX60LQ5H9U9 1706 aaKnown RBP9.61□□□□□ -0.87
PNKP-229ENST00000637897 RBBP6Q7Z6E9 1792 aaKnown RBP9.6□□□□□ -0.87
PNKP-229ENST00000637897 TCRBV5S4A2TA0A5A2 114 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 PEX10O60683 326 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 LDHCP07864 332 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 EN2P19622 333 aaPredicted RBP9.6□□□□□ -0.87
PNKP-229ENST00000637897 CAP2P40123 477 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 GSTO1P78417 241 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 OS9Q13438 667 aaPredicted RBP9.6□□□□□ -0.87
PNKP-229ENST00000637897 CCDC158Q5M9N0 1113 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 ZSCAN29Q8IWY8 852 aaPredicted RBP9.6□□□□□ -0.87
PNKP-229ENST00000637897 SLF2Q8IX21 1173 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 MIGA1Q8NAN2 632 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.6□□□□□ -0.87
PNKP-229ENST00000637897 PALD1Q9ULE6 856 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 LOC285556D6RIA3 1793 aa9.6□□□□□ -0.87
PNKP-229ENST00000637897 TRIM75PA6NK02 468 aa9.59□□□□□ -0.87
PNKP-229ENST00000637897 MAP4K4O95819 1239 aaPredicted RBP9.59□□□□□ -0.87
PNKP-229ENST00000637897 OSBPP22059 807 aa9.59□□□□□ -0.87
PNKP-229ENST00000637897 CYP7A1P22680 504 aa9.59□□□□□ -0.87
PNKP-229ENST00000637897 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
PNKP-229ENST00000637897 SLC4A8Q2Y0W8 1093 aa9.59□□□□□ -0.87
PNKP-229ENST00000637897 RPAP2Q8IXW5 612 aaPredicted RBP9.59□□□□□ -0.87
PNKP-229ENST00000637897 MAGEB6Q8N7X4 407 aa9.59□□□□□ -0.87
PNKP-229ENST00000637897 SH3TC2Q8TF17 1288 aa9.59□□□□□ -0.87
PNKP-229ENST00000637897 GABRQQ9UN88 632 aa9.59□□□□□ -0.87
PNKP-229ENST00000637897 MGAMO43451 1857 aa9.59□□□□□ -0.87
PNKP-229ENST00000637897 APBB1O00213 710 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 SMARCA5O60264 1052 aaPredicted RBP9.58□□□□□ -0.88
PNKP-229ENST00000637897 IDH1O75874 414 aaKnown RBP9.58□□□□□ -0.88
PNKP-229ENST00000637897 GUCY1A2P33402 732 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 PSMC4P43686 418 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 PLCD1P51178 756 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 RRP1P56182 461 aaKnown RBP9.58□□□□□ -0.88
PNKP-229ENST00000637897 SPP2Q13103 211 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 MTFR1Q15390 333 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 SH3D19Q5HYK7 790 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 SHISA4Q96DD7 197 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 SAP30BPQ9UHR5 308 aaKnown RBP9.58□□□□□ -0.88
PNKP-229ENST00000637897 DDX19BQ9UMR2 479 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 MYH1P12882 1939 aa9.58□□□□□ -0.88
PNKP-229ENST00000637897 PLXNB2O15031 1838 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 GDF11O95390 407 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 PDE6AP16499 860 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 GABPAQ06546 454 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 GADL1Q6ZQY3 521 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 PICK1Q9NRD5 415 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 PI4KBQ9UBF8 816 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 SRRDQ9UH36 339 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 AGTPBP1Q9UPW5 1226 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 SLC45A1Q9Y2W3 748 aa9.57□□□□□ -0.88
PNKP-229ENST00000637897 MYCP01106 439 aaPredicted RBP9.56□□□□□ -0.88
PNKP-229ENST00000637897 CYP2D6P10635 497 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 SHMT1P34896 483 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 HMGCS2P54868 508 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 PRKCZQ05513 592 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 PDE3AQ14432 1141 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 TATDN1Q6P1N9 297 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 ERC1Q8IUD2 1116 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 LCORLQ8N3X6 602 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 ZNF280CQ8ND82 737 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.56□□□□□ -0.88
PNKP-229ENST00000637897 KIF1BPQ96EK5 621 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 PARK7Q99497 189 aaKnown RBP9.56□□□□□ -0.88
PNKP-229ENST00000637897 WDR18Q9BV38 432 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 DHX36Q9H2U1 1008 aaKnown RBP9.56□□□□□ -0.88
PNKP-229ENST00000637897 BOLA2Q9H3K6 86 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 TXNRD2Q9NNW7 524 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 HERC5Q9UII4 1024 aaKnown RBP9.56□□□□□ -0.88
PNKP-229ENST00000637897 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 ZNF532Q9HCE3 1301 aa9.56□□□□□ -0.88
PNKP-229ENST00000637897 USP17L5A8MUK1 530 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 GOLIM4O00461 696 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 PRKAB2O43741 272 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 IGSF3O75054 1194 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms