RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PFKFB2O60825 505 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 WDHD1O75717 1129 aaPredicted RBP18.05■□□□□ 0.48
CLN6-219ENST00000637329 RAD17O75943 681 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 RPS12P25398 132 aaKnown RBP18.05■□□□□ 0.48
CLN6-219ENST00000637329 LIFRP42702 1097 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 RCAN1P53805 252 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 NUCB2P80303 420 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 TNIP1Q15025 636 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 CIAPIN1Q6FI81 312 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 LRRC2Q9BYS8 371 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 TOMM22Q9NS69 142 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 PCNTO95613 3336 aa18.05■□□□□ 0.48
CLN6-219ENST00000637329 CYP2D7A0A087X1C5 515 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 ERICH2A1L162 156 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 POLR3DP05423 398 aaPredicted RBP18.04■□□□□ 0.48
CLN6-219ENST00000637329 USP17L8P0C7I0 530 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 PDIA4P13667 645 aaKnown RBP18.04■□□□□ 0.48
CLN6-219ENST00000637329 APOBRQ0VD83 1088 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 ST3GAL1Q11201 340 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 CDC42EP5Q6NZY7 148 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 OGFOD1Q8N543 542 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 LLPHQ9BRT6 129 aaKnown RBP18.04■□□□□ 0.48
CLN6-219ENST00000637329 IDI2Q9BXS1 227 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 USP40Q9NVE5 1235 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
CLN6-219ENST00000637329 CYP2D6P10635 497 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 RASSF7Q02833 373 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 TMEM67Q5HYA8 995 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 RRP12Q5JTH9 1297 aaKnown RBP18.03■□□□□ 0.48
CLN6-219ENST00000637329 C16orf86Q6ZW13 317 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 CHST3Q7LGC8 479 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 TTC6Q86TZ1 520 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 IQCA1Q86XH1 822 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 TMTC2Q8N394 836 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 MTMR14Q8NCE2 650 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 IGDCC4Q8TDY8 1250 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 LARP6Q9BRS8 491 aaKnown RBP18.03■□□□□ 0.48
CLN6-219ENST00000637329 UBAC1Q9BSL1 405 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 OSBPL5Q9H0X9 879 aaPredicted RBP18.03■□□□□ 0.48
CLN6-219ENST00000637329 LY9Q9HBG7 655 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 SMC3Q9UQE7 1217 aa18.03■□□□□ 0.48
CLN6-219ENST00000637329 DICER1Q9UPY3 1922 aaKnown RBP18.02■□□□□ 0.48
CLN6-219ENST00000637329 KLF18A0A0U1RQI7 1052 aa18.02■□□□□ 0.48
CLN6-219ENST00000637329 GOLGA8BA8MQT2 603 aa18.02■□□□□ 0.48
CLN6-219ENST00000637329 IFIT3O14879 490 aaKnown RBP18.02■□□□□ 0.48
CLN6-219ENST00000637329 PDIA3P30101 505 aaKnown RBP18.02■□□□□ 0.48
CLN6-219ENST00000637329 CXCL9Q07325 125 aa18.02■□□□□ 0.48
CLN6-219ENST00000637329 RAB3GAP1Q15042 981 aa18.02■□□□□ 0.48
CLN6-219ENST00000637329 CFAP100Q494V2 611 aa18.02■□□□□ 0.48
CLN6-219ENST00000637329 CCDC178Q5BJE1 867 aa18.02■□□□□ 0.48
CLN6-219ENST00000637329 SPDYE2BA6NHP3 402 aa18.01■□□□□ 0.47
CLN6-219ENST00000637329 FZD9O00144 591 aa18.01■□□□□ 0.47
CLN6-219ENST00000637329 DHX16O60231 1041 aaKnown RBP18.01■□□□□ 0.47
CLN6-219ENST00000637329 SPDYE6P0CI01 402 aa18.01■□□□□ 0.47
CLN6-219ENST00000637329 HSPA1AP0DMV8 641 aaKnown RBP18.01■□□□□ 0.47
CLN6-219ENST00000637329 HSPA1BP0DMV9 641 aaKnown RBP18.01■□□□□ 0.47
CLN6-219ENST00000637329 RBM5P52756 815 aaKnown RBP eCLIP18.01■□□□□ 0.47
CLN6-219ENST00000637329 SMC1BQ8NDV3 1235 aa18.01■□□□□ 0.47
CLN6-219ENST00000637329 EHD4Q9H223 541 aa18.01■□□□□ 0.47
CLN6-219ENST00000637329 DHX36Q9H2U1 1008 aaKnown RBP18.01■□□□□ 0.47
CLN6-219ENST00000637329 PCDH10Q9P2E7 1040 aa18.01■□□□□ 0.47
CLN6-219ENST00000637329 SAP30BPQ9UHR5 308 aaKnown RBP18.01■□□□□ 0.47
CLN6-219ENST00000637329 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
CLN6-219ENST00000637329 PLIN4Q96Q06 1357 aa18.01■□□□□ 0.47
CLN6-219ENST00000637329 TNKSO95271 1327 aa18■□□□□ 0.47
CLN6-219ENST00000637329 RANBP6O60518 1105 aaKnown RBP18■□□□□ 0.47
CLN6-219ENST00000637329 ENTPD3O75355 529 aa18■□□□□ 0.47
CLN6-219ENST00000637329 HLA-DOAP06340 250 aa18■□□□□ 0.47
CLN6-219ENST00000637329 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
CLN6-219ENST00000637329 SCRN1Q12765 414 aa18■□□□□ 0.47
CLN6-219ENST00000637329 PICALMQ13492 652 aa18■□□□□ 0.47
CLN6-219ENST00000637329 WTAPQ15007 396 aa18■□□□□ 0.47
CLN6-219ENST00000637329 APOA5Q6Q788 366 aa18■□□□□ 0.47
CLN6-219ENST00000637329 NECAB1Q8N987 351 aa18■□□□□ 0.47
CLN6-219ENST00000637329 ZSCAN10Q96SZ4 725 aaPredicted RBP18■□□□□ 0.47
CLN6-219ENST00000637329 DDX4Q9NQI0 724 aaKnown RBP18■□□□□ 0.47
CLN6-219ENST00000637329 INCENPQ9NQS7 918 aa18■□□□□ 0.47
CLN6-219ENST00000637329 TMOD2Q9NZR1 351 aa18■□□□□ 0.47
CLN6-219ENST00000637329 SWAP70Q9UH65 585 aa18■□□□□ 0.47
CLN6-219ENST00000637329 KIF3AQ9Y496 699 aa18■□□□□ 0.47
CLN6-219ENST00000637329 CCDC69A6NI79 296 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 LMNB1P20700 586 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 PDCP20941 246 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 PLCD1P51178 756 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 HMGN5P82970 282 aaKnown RBP17.99■□□□□ 0.47
CLN6-219ENST00000637329 STK3Q13188 491 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 DLGAP5Q15398 846 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 SEC23AQ15436 765 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 NKX2-3Q8TAU0 364 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 GPHNQ9NQX3 736 aaPredicted RBP17.99■□□□□ 0.47
CLN6-219ENST00000637329 BRPF3Q9ULD4 1205 aa17.99■□□□□ 0.47
CLN6-219ENST00000637329 TSPY2A6NKD2 308 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 SMIM22K7EJ46 135 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 GJB2P29033 226 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 ZNF280AP59817 542 aaPredicted RBP17.98■□□□□ 0.47
CLN6-219ENST00000637329 GABPAQ06546 454 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 FKBP1CQ5VVH2 108 aa17.98■□□□□ 0.47
CLN6-219ENST00000637329 SYNE3Q6ZMZ3 975 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms