RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 UQCRFS1P1P0C7P4 283 aa22.46■■□□□ 1.19
CTSD-209ENST00000637158 ARID4AP29374 1257 aaPredicted RBP22.46■■□□□ 1.19
CTSD-209ENST00000637158 GCLCP48506 637 aaPredicted RBP22.46■■□□□ 1.19
CTSD-209ENST00000637158 ANKRD13CQ8N6S4 541 aa22.46■■□□□ 1.19
CTSD-209ENST00000637158 ZNF280CQ8ND82 737 aa22.46■■□□□ 1.19
CTSD-209ENST00000637158 HERC5Q9UII4 1024 aaKnown RBP22.46■■□□□ 1.19
CTSD-209ENST00000637158 SZT2Q5T011 3432 aa22.45■■□□□ 1.18
CTSD-209ENST00000637158 SPP2Q13103 211 aa22.45■■□□□ 1.18
CTSD-209ENST00000637158 AS3MTQ9HBK9 375 aa22.45■■□□□ 1.18
CTSD-209ENST00000637158 LRP2BPQ9P2M1 347 aa22.45■■□□□ 1.18
CTSD-209ENST00000637158 TRIOBPQ9H2D6 2365 aa22.45■■□□□ 1.18
CTSD-209ENST00000637158 TFRCP02786 760 aaKnown RBP22.44■■□□□ 1.18
CTSD-209ENST00000637158 SLURP2P0DP57 97 aa22.44■■□□□ 1.18
CTSD-209ENST00000637158 ELNP15502 786 aa22.44■■□□□ 1.18
CTSD-209ENST00000637158 CAP2P40123 477 aa22.44■■□□□ 1.18
CTSD-209ENST00000637158 ZNF384Q8TF68 577 aa22.44■■□□□ 1.18
CTSD-209ENST00000637158 DHX36Q9H2U1 1008 aaKnown RBP22.44■■□□□ 1.18
CTSD-209ENST00000637158 USP17L5A8MUK1 530 aa22.43■■□□□ 1.18
CTSD-209ENST00000637158 IGSF3O75054 1194 aa22.43■■□□□ 1.18
CTSD-209ENST00000637158 BAG3O95817 575 aa22.43■■□□□ 1.18
CTSD-209ENST00000637158 TREML2Q5T2D2 321 aa22.43■■□□□ 1.18
CTSD-209ENST00000637158 TBC1D9Q6ZT07 1266 aa22.43■■□□□ 1.18
CTSD-209ENST00000637158 TEX11Q8IYF3 940 aa22.43■■□□□ 1.18
CTSD-209ENST00000637158 RBM27Q9P2N5 1060 aaKnown RBP22.43■■□□□ 1.18
CTSD-209ENST00000637158 PI4KBQ9UBF8 816 aa22.43■■□□□ 1.18
CTSD-209ENST00000637158 PTPRFP10586 1907 aa22.42■■□□□ 1.18
CTSD-209ENST00000637158 PLCG2P16885 1265 aa22.42■■□□□ 1.18
CTSD-209ENST00000637158 ATF7IPQ6VMQ6 1270 aa22.42■■□□□ 1.18
CTSD-209ENST00000637158 CCDC84Q86UT8 332 aaPredicted RBP22.42■■□□□ 1.18
CTSD-209ENST00000637158 DEFB118Q96PH6 123 aa22.42■■□□□ 1.18
CTSD-209ENST00000637158 PAK6Q9NQU5 681 aaPredicted RBP22.42■■□□□ 1.18
CTSD-209ENST00000637158 TAOK2Q9UL54 1235 aa22.42■■□□□ 1.18
CTSD-209ENST00000637158 PHIPQ8WWQ0 1821 aa22.41■■□□□ 1.18
CTSD-209ENST00000637158 SH3D19Q5HYK7 790 aa22.41■■□□□ 1.18
CTSD-209ENST00000637158 PI16Q6UXB8 463 aa22.41■■□□□ 1.18
CTSD-209ENST00000637158 GPR108Q9NPR9 543 aa22.41■■□□□ 1.18
CTSD-209ENST00000637158 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.41■■□□□ 1.18
CTSD-209ENST00000637158 FAM196BA6NMK8 535 aa22.4■■□□□ 1.18
CTSD-209ENST00000637158 CCER2I3L3R5 266 aa22.4■■□□□ 1.18
CTSD-209ENST00000637158 EVI5O60447 810 aa22.4■■□□□ 1.18
CTSD-209ENST00000637158 TRIM27P14373 513 aa22.4■■□□□ 1.18
CTSD-209ENST00000637158 MCAMP43121 646 aa22.4■■□□□ 1.18
CTSD-209ENST00000637158 HMGCS2P54868 508 aa22.4■■□□□ 1.18
CTSD-209ENST00000637158 CCDC158Q5M9N0 1113 aa22.4■■□□□ 1.18
CTSD-209ENST00000637158 CRISPLD2Q9H0B8 497 aa22.4■■□□□ 1.18
CTSD-209ENST00000637158 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.4■■□□□ 1.18
CTSD-209ENST00000637158 A0A1W2PPC1 479 aa22.39■■□□□ 1.17
CTSD-209ENST00000637158 ZBTB7BO15156 539 aaPredicted RBP22.39■■□□□ 1.17
CTSD-209ENST00000637158 ASNSP08243 561 aa22.39■■□□□ 1.17
CTSD-209ENST00000637158 NAA16Q6N069 864 aaPredicted RBP22.39■■□□□ 1.17
CTSD-209ENST00000637158 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.17
CTSD-209ENST00000637158 WDR18Q9BV38 432 aa22.39■■□□□ 1.17
CTSD-209ENST00000637158 GINM1Q9NU53 330 aa22.39■■□□□ 1.17
CTSD-209ENST00000637158 PNMA6EA0A0J9YXQ4 647 aa22.38■■□□□ 1.17
CTSD-209ENST00000637158 HMGCRP04035 888 aa22.38■■□□□ 1.17
CTSD-209ENST00000637158 PPP4CP60510 307 aa22.38■■□□□ 1.17
CTSD-209ENST00000637158 FOXP4Q8IVH2 680 aaPredicted RBP22.38■■□□□ 1.17
CTSD-209ENST00000637158 ANKLE1Q8NAG6 615 aa22.38■■□□□ 1.17
CTSD-209ENST00000637158 SH3RF3Q8TEJ3 882 aaPredicted RBP22.38■■□□□ 1.17
CTSD-209ENST00000637158 TRIM34Q9BYJ4 488 aa22.38■■□□□ 1.17
CTSD-209ENST00000637158 ASCC2Q9H1I8 757 aaPredicted RBP22.38■■□□□ 1.17
CTSD-209ENST00000637158 PRO3102Q9H379 93 aa22.38■■□□□ 1.17
CTSD-209ENST00000637158 TTC39AQ5SRH9 613 aa22.37■■□□□ 1.17
CTSD-209ENST00000637158 NECAB2Q7Z6G3 386 aa22.37■■□□□ 1.17
CTSD-209ENST00000637158 TMOD4Q9NZQ9 345 aa22.37■■□□□ 1.17
CTSD-209ENST00000637158 C19orf81C9J6K1 198 aa22.36■■□□□ 1.17
CTSD-209ENST00000637158 BACE1P56817 501 aa22.36■■□□□ 1.17
CTSD-209ENST00000637158 IRX3P78415 501 aaPredicted RBP22.36■■□□□ 1.17
CTSD-209ENST00000637158 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.36■■□□□ 1.173e-9■■■■□ 20.4
CTSD-209ENST00000637158 AATFQ9NY61 560 aaKnown RBP eCLIP22.36■■□□□ 1.17
CTSD-209ENST00000637158 MORF4L1Q9UBU8 362 aa22.36■■□□□ 1.17
CTSD-209ENST00000637158 RPTORQ8N122 1335 aa22.35■■□□□ 1.17
CTSD-209ENST00000637158 HOXA7P31268 230 aaPredicted RBP22.35■■□□□ 1.17
CTSD-209ENST00000637158 OS9Q13438 667 aaPredicted RBP22.35■■□□□ 1.17
CTSD-209ENST00000637158 METTL16Q86W50 562 aaKnown RBP22.35■■□□□ 1.17
CTSD-209ENST00000637158 CRACR2BQ8N4Y2 399 aaPredicted RBP22.35■■□□□ 1.17
CTSD-209ENST00000637158 PAWRQ96IZ0 340 aaKnown RBP22.35■■□□□ 1.17
CTSD-209ENST00000637158 ZNF512BQ96KM6 892 aaPredicted RBP22.35■■□□□ 1.17
CTSD-209ENST00000637158 HMX1Q9NP08 348 aaPredicted RBP22.35■■□□□ 1.17
CTSD-209ENST00000637158 GJD2Q9UKL4 321 aa22.35■■□□□ 1.17
CTSD-209ENST00000637158 RRP1BQ14684 758 aaKnown RBP22.34■■□□□ 1.17
CTSD-209ENST00000637158 TNNI3KQ59H18 835 aa22.34■■□□□ 1.17
CTSD-209ENST00000637158 CLUAP1Q96AJ1 413 aa22.34■■□□□ 1.17
CTSD-209ENST00000637158 FPGT-TNNI3KV9GXZ4 949 aa22.34■■□□□ 1.17
CTSD-209ENST00000637158 LOC285556D6RIA3 1793 aa22.34■■□□□ 1.17
CTSD-209ENST00000637158 USP17L10C9JJH3 530 aa22.33■■□□□ 1.17
CTSD-209ENST00000637158 MTMR2Q13614 643 aa22.33■■□□□ 1.17
CTSD-209ENST00000637158 POLA2Q14181 598 aa22.33■■□□□ 1.17
CTSD-209ENST00000637158 ZKSCAN2Q63HK3 967 aa22.33■■□□□ 1.17
CTSD-209ENST00000637158 CERS3Q8IU89 383 aa22.33■■□□□ 1.17
CTSD-209ENST00000637158 GTF3C2Q8WUA4 911 aaPredicted RBP22.33■■□□□ 1.17
CTSD-209ENST00000637158 TGFBRAP1Q8WUH2 860 aa22.33■■□□□ 1.17
CTSD-209ENST00000637158 BCAR3O75815 825 aa22.32■■□□□ 1.16
CTSD-209ENST00000637158 HLA-DOAP06340 250 aa22.32■■□□□ 1.16
CTSD-209ENST00000637158 TRMT44Q8IYL2 757 aaKnown RBP22.32■■□□□ 1.16
CTSD-209ENST00000637158 GPRC5AQ8NFJ5 357 aa22.32■■□□□ 1.16
CTSD-209ENST00000637158 SOCS4Q8WXH5 440 aa22.32■■□□□ 1.16
CTSD-209ENST00000637158 SNRKQ9NRH2 765 aa22.32■■□□□ 1.16
CTSD-209ENST00000637158 FLT1P17948 1338 aa22.31■■□□□ 1.16
CTSD-209ENST00000637158 DOCK3Q8IZD9 2030 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms