RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PFKFB1P16118 471 aa14□□□□□ -0.17
CLN8-212ENST00000637083 SYKP43405 635 aa14□□□□□ -0.17
CLN8-212ENST00000637083 NLRP12P59046 1061 aa14□□□□□ -0.17
CLN8-212ENST00000637083 RILPL1Q5EBL4 403 aa14□□□□□ -0.17
CLN8-212ENST00000637083 CCDC186Q7Z3E2 898 aa14□□□□□ -0.17
CLN8-212ENST00000637083 NOSTRINQ8IVI9 506 aa14□□□□□ -0.17
CLN8-212ENST00000637083 AIFM3Q96NN9 605 aa14□□□□□ -0.17
CLN8-212ENST00000637083 MYL10Q9BUA6 226 aa14□□□□□ -0.17
CLN8-212ENST00000637083 INCENPQ9NQS7 918 aa14□□□□□ -0.17
CLN8-212ENST00000637083 RBM28Q9NW13 759 aaKnown RBP14□□□□□ -0.17
CLN8-212ENST00000637083 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
CLN8-212ENST00000637083 CEP131Q9UPN4 1083 aa14□□□□□ -0.17
CLN8-212ENST00000637083 HIBADHP31937 336 aaKnown RBP13.99□□□□□ -0.17
CLN8-212ENST00000637083 CHAF1AQ13111 956 aaPredicted RBP13.99□□□□□ -0.17
CLN8-212ENST00000637083 SPTY2D1Q68D10 685 aaPredicted RBP13.99□□□□□ -0.17
CLN8-212ENST00000637083 ELOA2Q8IYF1 753 aaPredicted RBP13.99□□□□□ -0.17
CLN8-212ENST00000637083 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
CLN8-212ENST00000637083 CELF1Q92879 486 aaKnown RBP13.99□□□□□ -0.17
CLN8-212ENST00000637083 RNF26Q9BY78 433 aaPredicted RBP13.99□□□□□ -0.17
CLN8-212ENST00000637083 A0A1B0GUL6 1792 aa13.99□□□□□ -0.17
CLN8-212ENST00000637083 PTGS1P23219 599 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 PTPAQ15257 358 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 CATIPQ7Z7H3 387 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 DHX40Q8IX18 779 aaKnown RBP13.98□□□□□ -0.17
CLN8-212ENST00000637083 SDR42E1Q8WUS8 393 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 MAP3K14Q99558 947 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 CRNKL1Q9BZJ0 848 aaKnown RBP13.98□□□□□ -0.17
CLN8-212ENST00000637083 KCNF1Q9H3M0 494 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 TNKSO95271 1327 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 UQCRHLA0A096LP55 91 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 DYNC1I1O14576 645 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 GNPATO15228 680 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 UQCRHP07919 91 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 FGRP09769 529 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 RESP18Q5W5W9 173 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 DIS3L2Q8IYB7 885 aaKnown RBP13.98□□□□□ -0.17
CLN8-212ENST00000637083 NUP133Q8WUM0 1156 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 ZSCAN10Q96SZ4 725 aaPredicted RBP13.98□□□□□ -0.17
CLN8-212ENST00000637083 ZKSCAN3Q9BRR0 538 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 CCNL1Q9UK58 526 aaPredicted RBP13.98□□□□□ -0.17
CLN8-212ENST00000637083 HPSEQ9Y251 543 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 TACC3Q9Y6A5 838 aa13.98□□□□□ -0.17
CLN8-212ENST00000637083 WDHD1O75717 1129 aaPredicted RBP13.97□□□□□ -0.17
CLN8-212ENST00000637083 MARCKSP29966 332 aaPredicted RBP13.97□□□□□ -0.17
CLN8-212ENST00000637083 SEC23AQ15436 765 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 ADGRA1Q86SQ6 560 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 AMIGO3Q86WK7 504 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 KRI1Q8N9T8 703 aaKnown RBP13.97□□□□□ -0.17
CLN8-212ENST00000637083 ATP8A2Q9NTI2 1148 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 FAM13BQ9NYF5 915 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 COL24A1Q17RW2 1714 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 SPATA31A6Q5VVP1 1343 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 NPHP1O15259 732 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 IFIT1BQ5T764 474 aaKnown RBP13.97□□□□□ -0.17
CLN8-212ENST00000637083 NBPF11Q86T75 865 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 AOPEPQ8N6M6 819 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 ARHGEF1Q92888 912 aaKnown RBP13.97□□□□□ -0.17
CLN8-212ENST00000637083 NSUN4Q96CB9 384 aaKnown RBP13.97□□□□□ -0.17
CLN8-212ENST00000637083 CCDC34Q96HJ3 373 aa13.97□□□□□ -0.17
CLN8-212ENST00000637083 ARPP21Q9UBL0 812 aaPredicted RBP13.97□□□□□ -0.17
CLN8-212ENST00000637083 COL1A1P02452 1464 aaPredicted RBP13.96□□□□□ -0.17
CLN8-212ENST00000637083 RRP9O43818 475 aaKnown RBP13.96□□□□□ -0.17
CLN8-212ENST00000637083 DDAH1O94760 285 aa13.96□□□□□ -0.17
CLN8-212ENST00000637083 GSDMDP57764 484 aa13.96□□□□□ -0.17
CLN8-212ENST00000637083 BRMS1Q9HCU9 246 aa13.96□□□□□ -0.17
CLN8-212ENST00000637083 MORC2Q9Y6X9 1032 aaPredicted RBP13.96□□□□□ -0.17
CLN8-212ENST00000637083 CACNA1SQ13698 1873 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 IKBKBO14920 756 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
CLN8-212ENST00000637083 MYO1BO43795 1136 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 ORC4O43929 436 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 DYNLL1P63167 89 aaKnown RBP13.95□□□□□ -0.18
CLN8-212ENST00000637083 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
CLN8-212ENST00000637083 GJD4Q96KN9 370 aaPredicted RBP13.95□□□□□ -0.18
CLN8-212ENST00000637083 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 TUBE1Q9UJT0 475 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 PYCARDQ9ULZ3 195 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 COL4A1P02462 1669 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 NHSQ6T4R5 1651 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 ECM29Q5VYK3 1845 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 BTBD18B2RXH4 712 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 BMP15O95972 392 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 MECOMQ03112 1051 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 PDE4BQ07343 736 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 SBK1Q52WX2 424 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 CTR9Q6PD62 1173 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 SHC4Q6S5L8 630 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 OLFM4Q6UX06 510 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 STK11IPQ8N1F8 1099 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 CCDC24Q8N4L8 307 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 MYRIPQ8NFW9 859 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 MAP7D2Q96T17 732 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 DUOX1Q9NRD9 1551 aa13.95□□□□□ -0.18
CLN8-212ENST00000637083 RFC4P35249 363 aa13.94□□□□□ -0.18
CLN8-212ENST00000637083 TRAPPC3LQ5T215 181 aa13.94□□□□□ -0.18
CLN8-212ENST00000637083 KANK3Q6NY19 840 aa13.94□□□□□ -0.18
CLN8-212ENST00000637083 MTERF4Q7Z6M4 381 aaKnown RBP13.94□□□□□ -0.18
CLN8-212ENST00000637083 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
CLN8-212ENST00000637083 CNNM3Q8NE01 707 aa13.94□□□□□ -0.18
CLN8-212ENST00000637083 KCNH3Q9ULD8 1083 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms