RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ARHGEF1Q92888 912 aaKnown RBP21.83■■□□□ 1.09
CLN5-216ENST00000636780 SMARCC1Q92922 1105 aaPredicted RBP21.83■■□□□ 1.09
CLN5-216ENST00000636780 MYH15Q9Y2K3 1946 aa21.83■■□□□ 1.09
CLN5-216ENST00000636780 C4AP0C0L4 1744 aa21.83■■□□□ 1.09
CLN5-216ENST00000636780 C4BP0C0L5 1744 aa21.83■■□□□ 1.09
CLN5-216ENST00000636780 ATP1A3P13637 1013 aa21.83■■□□□ 1.09
CLN5-216ENST00000636780 LMOD1P29536 600 aaPredicted RBP21.83■■□□□ 1.09
CLN5-216ENST00000636780 SYKP43405 635 aa21.83■■□□□ 1.09
CLN5-216ENST00000636780 ENAHQ8N8S7 591 aaPredicted RBP21.83■■□□□ 1.09
CLN5-216ENST00000636780 A0A1W2PQ27 194 aa21.83■■□□□ 1.08
CLN5-216ENST00000636780 A0A1W2PQ64 194 aa21.83■■□□□ 1.08
CLN5-216ENST00000636780 A0A1W2PQD8 194 aa21.83■■□□□ 1.08
CLN5-216ENST00000636780 CTAGE5O15320 804 aa21.83■■□□□ 1.08
CLN5-216ENST00000636780 CDKL5O76039 1030 aa21.83■■□□□ 1.08
CLN5-216ENST00000636780 FMNL1O95466 1100 aaPredicted RBP21.83■■□□□ 1.08
CLN5-216ENST00000636780 CABP5Q9NP86 173 aa21.83■■□□□ 1.08
CLN5-216ENST00000636780 PODXL2Q9NZ53 605 aa21.83■■□□□ 1.08
CLN5-216ENST00000636780 ERICH2A1L162 156 aa21.82■■□□□ 1.08
CLN5-216ENST00000636780 GOLGA6L6A8MZA4 724 aa21.82■■□□□ 1.08
CLN5-216ENST00000636780 UBAP1LF5GYI3 381 aa21.82■■□□□ 1.08
CLN5-216ENST00000636780 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
CLN5-216ENST00000636780 CRACR2BQ8N4Y2 399 aaPredicted RBP21.82■■□□□ 1.08
CLN5-216ENST00000636780 TRMT1Q9NXH9 659 aaKnown RBP21.82■■□□□ 1.08
CLN5-216ENST00000636780 CCNL1Q9UK58 526 aaPredicted RBP21.82■■□□□ 1.08
CLN5-216ENST00000636780 BCL9LQ86UU0 1499 aa21.82■■□□□ 1.08
CLN5-216ENST00000636780 PNPLA7Q6ZV29 1317 aa21.82■■□□□ 1.08
CLN5-216ENST00000636780 ZPR1O75312 459 aa21.82■■□□□ 1.08
CLN5-216ENST00000636780 CEP57L1Q8IYX8 460 aa21.82■■□□□ 1.08
CLN5-216ENST00000636780 LRP5O75197 1615 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 AHDC1Q5TGY3 1603 aaPredicted RBP21.81■■□□□ 1.08
CLN5-216ENST00000636780 ZNF804BA4D1E1 1349 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 CMA1P23946 247 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 ZNF827Q17R98 1081 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 CTR9Q6PD62 1173 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 CNNM2Q9H8M5 875 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 SPTLC3Q9NUV7 552 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 V9GY48 417 aaPredicted RBP21.81■■□□□ 1.08
CLN5-216ENST00000636780 PHLPP1O60346 1717 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 IFNAR1P17181 557 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 GOLGA8FQ08AF8 430 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 GOLGA8DPQ0D2H9 430 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 NFIXQ14938 502 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 ZRSR1Q15695 479 aaKnown RBP21.81■■□□□ 1.08
CLN5-216ENST00000636780 CLEC4GQ6UXB4 293 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 ZMYND15Q9H091 742 aa21.81■■□□□ 1.08
CLN5-216ENST00000636780 U2AF2P26368 475 aaKnown RBP eCLIP21.8■■□□□ 1.08
CLN5-216ENST00000636780 CASP1P29466 404 aa21.8■■□□□ 1.08
CLN5-216ENST00000636780 NOSTRINQ8IVI9 506 aa21.8■■□□□ 1.08
CLN5-216ENST00000636780 GNL3LQ9NVN8 582 aaKnown RBP21.8■■□□□ 1.08
CLN5-216ENST00000636780 IFNKQ9P0W0 207 aa21.8■■□□□ 1.08
CLN5-216ENST00000636780 SMC2O95347 1197 aa21.8■■□□□ 1.08
CLN5-216ENST00000636780 MMP1P03956 469 aa21.8■■□□□ 1.08
CLN5-216ENST00000636780 UBE4AQ14139 1066 aa21.8■■□□□ 1.08
CLN5-216ENST00000636780 NSUN4Q96CB9 384 aaKnown RBP21.8■■□□□ 1.08
CLN5-216ENST00000636780 BAZ2AQ9UIF9 1905 aaKnown RBP21.8■■□□□ 1.08
CLN5-216ENST00000636780 SART3Q15020 963 aaKnown RBP21.79■■□□□ 1.08
CLN5-216ENST00000636780 SEC23AQ15436 765 aa21.79■■□□□ 1.08
CLN5-216ENST00000636780 DIXDC1Q155Q3 683 aa21.79■■□□□ 1.08
CLN5-216ENST00000636780 XPO4Q9C0E2 1151 aaKnown RBP21.79■■□□□ 1.08
CLN5-216ENST00000636780 USP17L8P0C7I0 530 aa21.78■■□□□ 1.08
CLN5-216ENST00000636780 GNAT2P19087 354 aa21.78■■□□□ 1.08
CLN5-216ENST00000636780 METTL16Q86W50 562 aaKnown RBP21.78■■□□□ 1.08
CLN5-216ENST00000636780 ZNF592Q92610 1267 aa21.78■■□□□ 1.08
CLN5-216ENST00000636780 CICQ96RK0 1608 aaPredicted RBP21.78■■□□□ 1.08
CLN5-216ENST00000636780 PRR29P0C7W0 189 aa21.78■■□□□ 1.08
CLN5-216ENST00000636780 HIBADHP31937 336 aaKnown RBP21.78■■□□□ 1.08
CLN5-216ENST00000636780 DYNLL2Q96FJ2 89 aa21.78■■□□□ 1.08
CLN5-216ENST00000636780 LRRC8AQ8IWT6 810 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 TRIM22Q8IYM9 498 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 DPF2Q92785 391 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 ZSCAN10Q96SZ4 725 aaPredicted RBP21.77■■□□□ 1.08
CLN5-216ENST00000636780 NARFQ9UHQ1 456 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 NRAPQ86VF7 1730 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 BMP6P22004 513 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 TM4SF1P30408 202 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 PDE4BQ07343 736 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 NAA30Q147X3 362 aaPredicted RBP21.77■■□□□ 1.08
CLN5-216ENST00000636780 IFIT1BQ5T764 474 aaKnown RBP21.77■■□□□ 1.08
CLN5-216ENST00000636780 FBXO33Q7Z6M2 555 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 ESR2Q92731 530 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 ANKIB1Q9P2G1 1089 aa21.77■■□□□ 1.08
CLN5-216ENST00000636780 COL22A1Q8NFW1 1626 aaPredicted RBP21.77■■□□□ 1.07
CLN5-216ENST00000636780 NCAPHQ15003 741 aa21.76■■□□□ 1.07
CLN5-216ENST00000636780 RASGRP2Q7LDG7 609 aa21.76■■□□□ 1.07
CLN5-216ENST00000636780 USP21Q9UK80 565 aa21.76■■□□□ 1.07
CLN5-216ENST00000636780 KCNH3Q9ULD8 1083 aa21.76■■□□□ 1.07
CLN5-216ENST00000636780 RIOK3O14730 519 aaKnown RBP21.76■■□□□ 1.07
CLN5-216ENST00000636780 POLR2DO15514 142 aaKnown RBP21.76■■□□□ 1.07
CLN5-216ENST00000636780 COBLO75128 1261 aa21.76■■□□□ 1.07
CLN5-216ENST00000636780 PKN1Q16512 942 aa21.76■■□□□ 1.07
CLN5-216ENST00000636780 PCDHA5Q9Y5H7 936 aa21.76■■□□□ 1.07
CLN5-216ENST00000636780 MYH2Q9UKX2 1941 aa21.75■■□□□ 1.07
CLN5-216ENST00000636780 WNK3Q9BYP7 1800 aa21.75■■□□□ 1.07
CLN5-216ENST00000636780 CNNM3Q8NE01 707 aa21.75■■□□□ 1.07
CLN5-216ENST00000636780 STAMQ92783 540 aa21.75■■□□□ 1.07
CLN5-216ENST00000636780 HPSEQ9Y251 543 aa21.75■■□□□ 1.07
CLN5-216ENST00000636780 RTCBQ9Y3I0 505 aaKnown RBP21.75■■□□□ 1.07
CLN5-216ENST00000636780 RTL9Q8NET4 1388 aa21.75■■□□□ 1.07
CLN5-216ENST00000636780 TOM1O60784 492 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms