RNA–Protein interactions for RNA: ENST00000635659.1

SMARCA2-244, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-244ENST00000635659 LRRC3Q9BY71 257 aa9.6□□□□□ -0.87
SMARCA2-244ENST00000635659 SNTG2Q9NY99 539 aa9.6□□□□□ -0.87
SMARCA2-244ENST00000635659 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
SMARCA2-244ENST00000635659 ABCC11Q96J66 1382 aa9.6□□□□□ -0.87
SMARCA2-244ENST00000635659 SENP3-EIF4A1A0A087X0R7 540 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 AVPP01185 164 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 THBS1P07996 1170 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 ATF3P18847 181 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 CRKP46108 304 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 UBAP2LQ14157 1087 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 RASA3Q14644 834 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.59□□□□□ -0.874e-6■□□□□ 10.9
SMARCA2-244ENST00000635659 RGL3Q3MIN7 710 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 TRIM46Q7Z4K8 759 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 TRIM42Q8IWZ5 723 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 ANAPC16Q96DE5 110 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 SHDQ96IW2 340 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 DEPDC7Q96QD5 511 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 ZNF576Q9H609 170 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 SEC31BQ9NQW1 1179 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 RGS17Q9UGC6 210 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 R3HCC1Q9Y3T6 440 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 PLEKHH1Q9ULM0 1364 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 ABCA3Q99758 1704 aa9.59□□□□□ -0.87
SMARCA2-244ENST00000635659 A0A096LPE4 126 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 A0A1W2PPZ6 126 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 NFKBIEO00221 500 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 MAPTP10636 758 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 NRLP54845 237 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 SPEM2Q0P670 501 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 SPRED3Q2MJR0 410 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 TNNI3KQ59H18 835 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 DHX32Q7L7V1 743 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 CCDC84Q86UT8 332 aaPredicted RBP9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 STRN4Q9NRL3 753 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 MARK1Q9P0L2 795 aa9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 DHX57Q6P158 1386 aaKnown RBP9.58□□□□□ -0.88
SMARCA2-244ENST00000635659 METTL12A8MUP2 240 aa9.57□□□□□ -0.88
SMARCA2-244ENST00000635659 NXPE3Q969Y0 559 aa9.57□□□□□ -0.88
SMARCA2-244ENST00000635659 GPATCH3Q96I76 525 aa9.57□□□□□ -0.88
SMARCA2-244ENST00000635659 RNPC3Q96LT9 517 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-244ENST00000635659 NUCKS1Q9H1E3 243 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-244ENST00000635659 PXDNQ92626 1479 aa9.57□□□□□ -0.88
SMARCA2-244ENST00000635659 TRPA1O75762 1119 aa9.56□□□□□ -0.88
SMARCA2-244ENST00000635659 PTPROQ16827 1216 aa9.56□□□□□ -0.88
SMARCA2-244ENST00000635659 KCNB2Q92953 911 aa9.56□□□□□ -0.88
SMARCA2-244ENST00000635659 ZFP42Q96MM3 310 aa9.56□□□□□ -0.88
SMARCA2-244ENST00000635659 NSUN5Q96P11 429 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-244ENST00000635659 HHIPQ96QV1 700 aa9.56□□□□□ -0.88
SMARCA2-244ENST00000635659 BRINP2Q9C0B6 783 aa9.56□□□□□ -0.88
SMARCA2-244ENST00000635659 NDFIP2Q9NV92 336 aa9.56□□□□□ -0.88
SMARCA2-244ENST00000635659 TOPAZ1Q8N9V7 1692 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 PNPLA6Q8IY17 1366 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 PAGE1O75459 146 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 FAAP100Q0VG06 881 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 SEZ6Q53EL9 994 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 TMEM132EQ6IEE7 984 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 RIPOR1Q6ZS17 1223 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 BHMTQ93088 406 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 GPN3Q9UHW5 284 aaPredicted RBP9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 MSRB2Q9Y3D2 182 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 ITSN1Q15811 1721 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 TRPM3Q9HCF6 1732 aaPredicted RBP9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 SPATA31A6Q5VVP1 1343 aa9.55□□□□□ -0.88
SMARCA2-244ENST00000635659 CRYBG1Q9Y4K1 1723 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 H7C1W4 665 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 PDE2AO00408 941 aaPredicted RBP9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 SMAD7O15105 426 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 GPLD1P80108 840 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 MPP2Q14168 576 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 RNF187Q5TA31 235 aaPredicted RBP9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 CCDC81Q6ZN84 652 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 GATAD2BQ8WXI9 593 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 DDX17Q92841 729 aaKnown RBP9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 SLC30A3Q99726 388 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 TMEM39AQ9NV64 488 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 HCN2Q9UL51 889 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 PPT2Q9UMR5 302 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 SAMM50Q9Y512 469 aa9.54□□□□□ -0.88
SMARCA2-244ENST00000635659 TRPM1Q7Z4N2 1603 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 FAM221BA6H8Z2 402 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 BNIP3LO60238 219 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 F13A1P00488 732 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 LMNB1P20700 586 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 GIPRP48546 466 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 EIF6P56537 245 aaKnown RBP9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 PLEKHG4Q58EX7 1191 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 BNC2Q6ZN30 1099 aaPredicted RBP9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 WAPLQ7Z5K2 1190 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 TRPM4Q8TD43 1214 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 ASAP3Q8TDY4 903 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 PBX4Q9BYU1 374 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.53□□□□□ -0.88
SMARCA2-244ENST00000635659 ALS2Q96Q42 1657 aa9.52□□□□□ -0.89
SMARCA2-244ENST00000635659 hCG_2014768A0A024R1R8 64 aa9.52□□□□□ -0.89
SMARCA2-244ENST00000635659 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms