RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 VWA3BQ502W6 1294 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
COL11A1-211ENST00000635193 DDX21Q9NR30 783 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL11A1-211ENST00000635193 SHANK2Q9UPX8 1470 aa13.02□□□□□ -0.32
COL11A1-211ENST00000635193 ACTN4O43707 911 aaKnown RBP13.02□□□□□ -0.32
COL11A1-211ENST00000635193 ZNF131P52739 623 aa13.02□□□□□ -0.32
COL11A1-211ENST00000635193 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.32
COL11A1-211ENST00000635193 DCAF17Q5H9S7 520 aaPredicted RBP13.02□□□□□ -0.32
COL11A1-211ENST00000635193 GKAP1Q5VSY0 366 aaPredicted RBP13.02□□□□□ -0.32
COL11A1-211ENST00000635193 FAM71BQ8TC56 605 aa13.02□□□□□ -0.32
COL11A1-211ENST00000635193 PYCARDQ9ULZ3 195 aa13.02□□□□□ -0.32
COL11A1-211ENST00000635193 ABCC4O15439 1325 aa13.02□□□□□ -0.32
COL11A1-211ENST00000635193 ZNF365Q70YC5 407 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 TAOK1Q7L7X3 1001 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.33
COL11A1-211ENST00000635193 ZCRB1Q8TBF4 217 aaKnown RBP13.02□□□□□ -0.33
COL11A1-211ENST00000635193 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 PALD1Q9ULE6 856 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 MTMR6Q9Y217 621 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 COMMD10Q9Y6G5 202 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 ADKP55263 362 aaKnown RBP13.02□□□□□ -0.33
COL11A1-211ENST00000635193 ADALQ6DHV7 355 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 CNNM4Q6P4Q7 775 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 PHLDB2Q86SQ0 1253 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 EFCAB13Q8IY85 973 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 ARHGAP24Q8N264 748 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 KLHDC4Q8TBB5 520 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 CAPS2Q9BXY5 557 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 PPANQ9NQ55 473 aaKnown RBP13.02□□□□□ -0.33
COL11A1-211ENST00000635193 MCM9Q9NXL9 1143 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 UTP11Q9Y3A2 253 aaKnown RBP13.02□□□□□ -0.33
COL11A1-211ENST00000635193 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 KRT40Q6A162 431 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.33
COL11A1-211ENST00000635193 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 USP19O94966 1318 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.33
COL11A1-211ENST00000635193 ATP2A2P16615 1042 aaKnown RBP13.01□□□□□ -0.33
COL11A1-211ENST00000635193 SNCBQ16143 134 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 SEPT14Q6ZU15 432 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 BABAM1Q9NWV8 329 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 GOLGA8KD6RF30 607 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 RPL13P26373 211 aaKnown RBP13.01□□□□□ -0.33
COL11A1-211ENST00000635193 TRAF1Q13077 416 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 PNOCQ13519 176 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 CEP128Q6ZU80 1094 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 PIK3AP1Q6ZUJ8 805 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 CCDC65Q8IXS2 484 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 JRKLQ9Y4A0 524 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
COL11A1-211ENST00000635193 CEBPAP49715 358 aaPredicted RBP13.01□□□□□ -0.33
COL11A1-211ENST00000635193 LETM2Q2VYF4 491 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 KBTBD3Q8NAB2 608 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 EYA2O00167 538 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 ETF1P62495 437 aaKnown RBP13.01□□□□□ -0.33
COL11A1-211ENST00000635193 MTMR3Q13615 1198 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 APPBP2Q92624 585 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 CHAMP1Q96JM3 812 aa13.01□□□□□ -0.33
COL11A1-211ENST00000635193 ATP8B1O43520 1251 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 PPARDQ03181 441 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 TBC1D31Q96DN5 1066 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 DNMT1P26358 1616 aaKnown RBP13□□□□□ -0.33
COL11A1-211ENST00000635193 RGS12O14924 1447 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 HIP1RO75146 1068 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 MAP7Q14244 749 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 MUM1Q2TAK8 710 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 TRIM68Q6AZZ1 485 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 CCDC170Q8IYT3 715 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 GBP7Q8N8V2 638 aaPredicted RBP13□□□□□ -0.33
COL11A1-211ENST00000635193 STK38LQ9Y2H1 464 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
COL11A1-211ENST00000635193 LUC7L3O95232 432 aaKnown RBP13□□□□□ -0.33
COL11A1-211ENST00000635193 MAGEA1P43355 309 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 TTC38Q5R3I4 469 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 ANTXR1Q9H6X2 564 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 PPP2R2CQ9Y2T4 447 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 CETN3O15182 167 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 CFAP157Q5JU67 520 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 CCDC62Q6P9F0 684 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 PHKBQ93100 1093 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 PSMB7Q99436 277 aa13□□□□□ -0.33
COL11A1-211ENST00000635193 FRMD3A2A2Y4 597 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 ASIC2Q16515 512 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
COL11A1-211ENST00000635193 CCDC51Q96ER9 411 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 PDE11AQ9HCR9 933 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 SPDYE3A6NKU9 549 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 GPAA1O43292 621 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 HOXB7P09629 217 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 HOXC9P31274 260 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 SLC9C1Q4G0N8 1177 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 CFAP221Q4G0U5 840 aa12.99□□□□□ -0.33
COL11A1-211ENST00000635193 SAR1BQ9Y6B6 198 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms