RNA–Protein interactions for RNA: ENST00000631289.1

CHRNA4-214, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-214ENST00000631289 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.57■■□□□ 1.68
CHRNA4-214ENST00000631289 PNMA3Q9UL41 463 aa25.57■■□□□ 1.68
CHRNA4-214ENST00000631289 AGTPBP1Q9UPW5 1226 aa25.57■■□□□ 1.68
CHRNA4-214ENST00000631289 ATAD5Q96QE3 1844 aa25.57■■□□□ 1.68
CHRNA4-214ENST00000631289 SURF6O75683 361 aaKnown RBP25.56■■□□□ 1.68
CHRNA4-214ENST00000631289 PLCG2P16885 1265 aa25.56■■□□□ 1.68
CHRNA4-214ENST00000631289 HNRNPUQ00839 825 aaKnown RBP eCLIP25.56■■□□□ 1.68
CHRNA4-214ENST00000631289 HABP4Q5JVS0 413 aaKnown RBP25.56■■□□□ 1.68
CHRNA4-214ENST00000631289 CCDC84Q86UT8 332 aaPredicted RBP25.56■■□□□ 1.68
CHRNA4-214ENST00000631289 SLAIN1Q8ND83 568 aa25.56■■□□□ 1.68
CHRNA4-214ENST00000631289 TBC1D2Q9BYX2 928 aa25.56■■□□□ 1.68
CHRNA4-214ENST00000631289 MAST2Q6P0Q8 1798 aa25.56■■□□□ 1.68
CHRNA4-214ENST00000631289 SH3RF3Q8TEJ3 882 aaPredicted RBP25.55■■□□□ 1.68
CHRNA4-214ENST00000631289 DBNDD2Q9BQY9 259 aa25.55■■□□□ 1.68
CHRNA4-214ENST00000631289 HERC5Q9UII4 1024 aaKnown RBP25.55■■□□□ 1.68
CHRNA4-214ENST00000631289 CEP290O15078 2479 aa25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 TNPO2O14787 897 aaKnown RBP25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 CCL5P13501 91 aa25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 SPP2Q13103 211 aa25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 ITPRIPQ8IWB1 547 aa25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 PROCA1Q8NCQ7 364 aaPredicted RBP25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 ZNF280CQ8ND82 737 aa25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 RNF208Q9H0X6 261 aa25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 C1orf115Q9H7X2 142 aa25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 AATFQ9NY61 560 aaKnown RBP eCLIP25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 GABRQQ9UN88 632 aa25.54■■□□□ 1.68
CHRNA4-214ENST00000631289 CAP2P40123 477 aa25.53■■□□□ 1.68
CHRNA4-214ENST00000631289 PABPC4Q13310 644 aaKnown RBP eCLIP25.53■■□□□ 1.68
CHRNA4-214ENST00000631289 DHX36Q9H2U1 1008 aaKnown RBP25.53■■□□□ 1.68
CHRNA4-214ENST00000631289 PI4KBQ9UBF8 816 aa25.53■■□□□ 1.68
CHRNA4-214ENST00000631289 USP17L5A8MUK1 530 aa25.52■■□□□ 1.68
CHRNA4-214ENST00000631289 ADCY3O60266 1144 aa25.52■■□□□ 1.68
CHRNA4-214ENST00000631289 GJB1P08034 283 aa25.52■■□□□ 1.68
CHRNA4-214ENST00000631289 TREML2Q5T2D2 321 aa25.52■■□□□ 1.68
CHRNA4-214ENST00000631289 ANKRD13CQ8N6S4 541 aa25.52■■□□□ 1.68
CHRNA4-214ENST00000631289 AS3MTQ9HBK9 375 aa25.52■■□□□ 1.68
CHRNA4-214ENST00000631289 IGSF3O75054 1194 aa25.51■■□□□ 1.67
CHRNA4-214ENST00000631289 FLT3LGP49771 235 aa25.51■■□□□ 1.67
CHRNA4-214ENST00000631289 COA7Q96BR5 231 aa25.51■■□□□ 1.67
CHRNA4-214ENST00000631289 SHISA4Q96DD7 197 aa25.51■■□□□ 1.67
CHRNA4-214ENST00000631289 ZNF512BQ96KM6 892 aaPredicted RBP25.51■■□□□ 1.67
CHRNA4-214ENST00000631289 TRIM34Q9BYJ4 488 aa25.51■■□□□ 1.67
CHRNA4-214ENST00000631289 LOC285556D6RIA3 1793 aa25.51■■□□□ 1.67
CHRNA4-214ENST00000631289 CYP2E1P05181 493 aaPredicted RBP25.5■■□□□ 1.67
CHRNA4-214ENST00000631289 GJA8P48165 433 aa25.5■■□□□ 1.67
CHRNA4-214ENST00000631289 HMGCS2P54868 508 aa25.5■■□□□ 1.67
CHRNA4-214ENST00000631289 PPP4CP60510 307 aa25.5■■□□□ 1.67
CHRNA4-214ENST00000631289 TGFBRAP1Q8WUH2 860 aa25.5■■□□□ 1.67
CHRNA4-214ENST00000631289 MYO5AQ9Y4I1 1855 aaKnown RBP25.5■■□□□ 1.67
CHRNA4-214ENST00000631289 CDK5RAP2Q96SN8 1893 aa25.49■■□□□ 1.67
CHRNA4-214ENST00000631289 FAM110CQ1W6H9 321 aa25.49■■□□□ 1.67
CHRNA4-214ENST00000631289 MAPKAPK5Q8IW41 473 aa25.49■■□□□ 1.67
CHRNA4-214ENST00000631289 NOP58Q9Y2X3 529 aaKnown RBP25.49■■□□□ 1.67
CHRNA4-214ENST00000631289 DOCK3Q8IZD9 2030 aa25.49■■□□□ 1.67
CHRNA4-214ENST00000631289 ZAP70P43403 619 aa25.48■■□□□ 1.67
CHRNA4-214ENST00000631289 GCLCP48506 637 aaPredicted RBP25.48■■□□□ 1.67
CHRNA4-214ENST00000631289 IRF5Q13568 498 aa25.48■■□□□ 1.67
CHRNA4-214ENST00000631289 CRACR2BQ8N4Y2 399 aaPredicted RBP25.48■■□□□ 1.67
CHRNA4-214ENST00000631289 PXYLP1Q8TE99 480 aa25.48■■□□□ 1.67
CHRNA4-214ENST00000631289 DPF3Q92784 378 aa25.48■■□□□ 1.67
CHRNA4-214ENST00000631289 TAOK2Q9UL54 1235 aa25.48■■□□□ 1.67
CHRNA4-214ENST00000631289 FOCADQ5VW36 1801 aa25.48■■□□□ 1.67
CHRNA4-214ENST00000631289 FLT1P17948 1338 aa25.47■■□□□ 1.67
CHRNA4-214ENST00000631289 ZBTB7BO15156 539 aaPredicted RBP25.47■■□□□ 1.67
CHRNA4-214ENST00000631289 ASNSP08243 561 aa25.47■■□□□ 1.67
CHRNA4-214ENST00000631289 RRP1BQ14684 758 aaKnown RBP25.47■■□□□ 1.67
CHRNA4-214ENST00000631289 FOXP4Q8IVH2 680 aaPredicted RBP25.47■■□□□ 1.67
CHRNA4-214ENST00000631289 UNC93B1Q9H1C4 597 aa25.47■■□□□ 1.67
CHRNA4-214ENST00000631289 DBNLQ9UJU6 430 aaKnown RBP25.47■■□□□ 1.67
CHRNA4-214ENST00000631289 SIPA1L1O43166 1804 aa25.47■■□□□ 1.67
CHRNA4-214ENST00000631289 ELNP15502 786 aa25.46■■□□□ 1.67
CHRNA4-214ENST00000631289 SH3D19Q5HYK7 790 aa25.46■■□□□ 1.67
CHRNA4-214ENST00000631289 ADGRA1Q86SQ6 560 aa25.46■■□□□ 1.67
CHRNA4-214ENST00000631289 U2AF1L4Q8WU68 220 aaKnown RBP25.46■■□□□ 1.67
CHRNA4-214ENST00000631289 HTATIP2Q9BUP3 242 aa25.46■■□□□ 1.67
CHRNA4-214ENST00000631289 CCDC8Q9H0W5 538 aaPredicted RBP25.46■■□□□ 1.67
CHRNA4-214ENST00000631289 H0YGN5 161 aa25.45■■□□□ 1.66
CHRNA4-214ENST00000631289 INHAP05111 366 aa25.45■■□□□ 1.66
CHRNA4-214ENST00000631289 HLA-DOAP06340 250 aa25.45■■□□□ 1.66
CHRNA4-214ENST00000631289 RLBP1P12271 317 aa25.45■■□□□ 1.66
CHRNA4-214ENST00000631289 WDR18Q9BV38 432 aa25.45■■□□□ 1.66
CHRNA4-214ENST00000631289 PIH1D3Q9NQM4 214 aaKnown RBP25.45■■□□□ 1.66
CHRNA4-214ENST00000631289 TMOD4Q9NZQ9 345 aa25.45■■□□□ 1.66
CHRNA4-214ENST00000631289 CYP7A1P22680 504 aa25.44■■□□□ 1.66
CHRNA4-214ENST00000631289 MIER1Q8N108 512 aa25.44■■□□□ 1.66
CHRNA4-214ENST00000631289 ASCC2Q9H1I8 757 aaPredicted RBP25.44■■□□□ 1.66
CHRNA4-214ENST00000631289 GINM1Q9NU53 330 aa25.44■■□□□ 1.66
CHRNA4-214ENST00000631289 PALD1Q9ULE6 856 aa25.44■■□□□ 1.66
CHRNA4-214ENST00000631289 COLQQ9Y215 455 aaPredicted RBP25.44■■□□□ 1.66
CHRNA4-214ENST00000631289 IDH1O75874 414 aaKnown RBP25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 SGPL1O95470 568 aa25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 CAPN2P17655 700 aa25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 BACE1P56817 501 aa25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 IRX3P78415 501 aaPredicted RBP25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 MTMR2Q13614 643 aa25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 METTL16Q86W50 562 aaKnown RBP25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 CERS3Q8IU89 383 aa25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 ERC1Q8IUD2 1116 aa25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 EAF2Q96CJ1 260 aaPredicted RBP25.43■■□□□ 1.66
CHRNA4-214ENST00000631289 TLR7Q9NYK1 1049 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms