RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 SHROOM1Q2M3G4 852 aaPredicted RBP9.94□□□□□ -0.82
MECP2-220ENST00000631210 CREB3L3Q68CJ9 461 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 CHADLQ6NUI6 762 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 CDC37L1Q7L3B6 337 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 DCPSQ96C86 337 aaKnown RBP9.94□□□□□ -0.82
MECP2-220ENST00000631210 CDCA5Q96FF9 252 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 NAPBQ9H115 298 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 EHD4Q9H223 541 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 TMOD2Q9NZR1 351 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 ARPP21Q9UBL0 812 aaPredicted RBP9.94□□□□□ -0.82
MECP2-220ENST00000631210 FZD1Q9UP38 647 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 PPP2R3BQ9Y5P8 575 aa9.94□□□□□ -0.82
MECP2-220ENST00000631210 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
MECP2-220ENST00000631210 GREB1LQ9C091 1923 aaPredicted RBP9.94□□□□□ -0.82
MECP2-220ENST00000631210 PHF20L1A8MW92 1017 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 TBC1D12O60347 775 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 REC8O95072 547 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 TDO2P48775 406 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 TNNI2P48788 182 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 TNFAIP1Q13829 316 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 KIAA1211Q6ZU35 1233 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 C16orf86Q6ZW13 317 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 KIF2CQ99661 725 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 DHX36Q9H2U1 1008 aaKnown RBP9.93□□□□□ -0.82
MECP2-220ENST00000631210 PI4KBQ9UBF8 816 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 ZNF112Q9UJU3 913 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 CLEC11AQ9Y240 323 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 OTOFQ9HC10 1997 aa9.93□□□□□ -0.82
MECP2-220ENST00000631210 NEDD4P46934 1319 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 MINDY4BA8MYZ0 360 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 USP2O75604 605 aaPredicted RBP9.92□□□□□ -0.82
MECP2-220ENST00000631210 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
MECP2-220ENST00000631210 CDK8P49336 464 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 ADCK5Q3MIX3 580 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 CST9Q5W186 159 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 TATDN1Q6P1N9 297 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 MIGA2Q7L4E1 593 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 TTC6Q86TZ1 520 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 FOXP4Q8IVH2 680 aaPredicted RBP9.92□□□□□ -0.82
MECP2-220ENST00000631210 STAG1Q8WVM7 1258 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 CSRNP1Q96S65 589 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.92□□□□□ -0.82
MECP2-220ENST00000631210 NACAP1Q9BZK3 213 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 SERPINB13Q9UIV8 391 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 SNX14Q9Y5W7 946 aa9.92□□□□□ -0.82
MECP2-220ENST00000631210 TRPM7Q96QT4 1865 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 E7EWF7 191 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 ORC4O43929 436 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 TOMM70O94826 608 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 RASA1P20936 1047 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 GUCY1A2P33402 732 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 RBM25P49756 843 aaKnown RBP9.91□□□□□ -0.82
MECP2-220ENST00000631210 AKNAD1Q5T1N1 836 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 MOB2Q70IA6 237 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 STK11IPQ8N1F8 1099 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 RBM46Q8TBY0 533 aaKnown RBP9.91□□□□□ -0.82
MECP2-220ENST00000631210 CTNNA3Q9UI47 895 aa9.91□□□□□ -0.82
MECP2-220ENST00000631210 ZNF213O14771 459 aa9.9□□□□□ -0.82
MECP2-220ENST00000631210 PRDM1O75626 825 aa9.9□□□□□ -0.82
MECP2-220ENST00000631210 INPP5BP32019 993 aa9.9□□□□□ -0.82
MECP2-220ENST00000631210 ANTXR2P58335 489 aa9.9□□□□□ -0.82
MECP2-220ENST00000631210 MAP3K11Q16584 847 aa9.9□□□□□ -0.82
MECP2-220ENST00000631210 IMMTQ16891 758 aaKnown RBP9.9□□□□□ -0.82
MECP2-220ENST00000631210 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.9□□□□□ -0.82
MECP2-220ENST00000631210 CYB5R4Q7L1T6 521 aa9.9□□□□□ -0.82
MECP2-220ENST00000631210 ZSCAN29Q8IWY8 852 aaPredicted RBP9.9□□□□□ -0.82
MECP2-220ENST00000631210 MB21D2Q8IYB1 491 aaPredicted RBP9.9□□□□□ -0.82
MECP2-220ENST00000631210 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.9□□□□□ -0.82
MECP2-220ENST00000631210 KLRG1Q96E93 195 aa9.9□□□□□ -0.82
MECP2-220ENST00000631210 TBC1D32Q96NH3 1257 aa9.9□□□□□ -0.82
MECP2-220ENST00000631210 HERC5Q9UII4 1024 aaKnown RBP9.9□□□□□ -0.82
MECP2-220ENST00000631210 MYH8P13535 1937 aa9.9□□□□□ -0.83
MECP2-220ENST00000631210 PHIPQ8WWQ0 1821 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 ATAD5Q96QE3 1844 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 IGKV6D-41A0A0C4DH26 115 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 HLA-DOAP06340 250 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 AKR1B1P15121 316 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 NOVP48745 357 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 EXOSC10Q01780 885 aaKnown RBP9.89□□□□□ -0.83
MECP2-220ENST00000631210 SUPT20HL1Q3ZLR7 823 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 LDLRAD1Q5T700 205 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 SIAH1Q8IUQ4 282 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 IL17RBQ9NRM6 502 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.89□□□□□ -0.83
MECP2-220ENST00000631210 SWAP70Q9UH65 585 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 TAOK2Q9UL54 1235 aa9.89□□□□□ -0.83
MECP2-220ENST00000631210 PLIN4Q96Q06 1357 aa9.88□□□□□ -0.83
MECP2-220ENST00000631210 DOCK1Q14185 1865 aa9.88□□□□□ -0.83
MECP2-220ENST00000631210 B4E1Z4 1266 aa9.88□□□□□ -0.83
MECP2-220ENST00000631210 CAP2P40123 477 aa9.88□□□□□ -0.83
MECP2-220ENST00000631210 SMC1BQ8NDV3 1235 aa9.88□□□□□ -0.83
MECP2-220ENST00000631210 ZNF341Q9BYN7 854 aa9.88□□□□□ -0.83
MECP2-220ENST00000631210 C22orf23Q9BZE7 217 aa9.88□□□□□ -0.83
MECP2-220ENST00000631210 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.88□□□□□ -0.83
MECP2-220ENST00000631210 ZSWIM5Q9P217 1185 aa9.88□□□□□ -0.83
MECP2-220ENST00000631210 NMT2O60551 498 aa9.87□□□□□ -0.83
MECP2-220ENST00000631210 CELF2O95319 508 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8453.1 ms