RNA–Protein interactions for RNA: ENST00000628267.2

UBE3A-215, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-215ENST00000628267 ZNF384Q8TF68 577 aa24.81■■□□□ 1.56
UBE3A-215ENST00000628267 DEFB118Q96PH6 123 aa24.81■■□□□ 1.56
UBE3A-215ENST00000628267 PAK6Q9NQU5 681 aaPredicted RBP24.81■■□□□ 1.56
UBE3A-215ENST00000628267 HMG20BQ9P0W2 317 aa24.81■■□□□ 1.56
UBE3A-215ENST00000628267 EVI5O60447 810 aa24.8■■□□□ 1.56
UBE3A-215ENST00000628267 GCLCP48506 637 aaPredicted RBP24.8■■□□□ 1.56
UBE3A-215ENST00000628267 SPP2Q13103 211 aa24.8■■□□□ 1.56
UBE3A-215ENST00000628267 PABPC4Q13310 644 aaKnown RBP eCLIP24.8■■□□□ 1.56
UBE3A-215ENST00000628267 GORABQ5T7V8 394 aa24.8■■□□□ 1.56
UBE3A-215ENST00000628267 SPATA5Q8NB90 893 aa24.8■■□□□ 1.56
UBE3A-215ENST00000628267 ZNF280CQ8ND82 737 aa24.8■■□□□ 1.56
UBE3A-215ENST00000628267 NSUN4Q96CB9 384 aaKnown RBP24.8■■□□□ 1.56
UBE3A-215ENST00000628267 COL2A1P02458 1487 aaPredicted RBP24.8■■□□□ 1.56
UBE3A-215ENST00000628267 TAOK2Q9UL54 1235 aa24.79■■□□□ 1.56
UBE3A-215ENST00000628267 FAM196BA6NMK8 535 aa24.78■■□□□ 1.56
UBE3A-215ENST00000628267 CAP2P40123 477 aa24.78■■□□□ 1.56
UBE3A-215ENST00000628267 RARSP54136 660 aaKnown RBP24.78■■□□□ 1.56
UBE3A-215ENST00000628267 CRISPLD2Q9H0B8 497 aa24.78■■□□□ 1.56
UBE3A-215ENST00000628267 A0A1W2PPC1 479 aa24.77■■□□□ 1.56
UBE3A-215ENST00000628267 RAI14Q9P0K7 980 aa24.77■■□□□ 1.56
UBE3A-215ENST00000628267 HERC5Q9UII4 1024 aaKnown RBP24.77■■□□□ 1.56
UBE3A-215ENST00000628267 DOCK3Q8IZD9 2030 aa24.76■■□□□ 1.55
UBE3A-215ENST00000628267 USP17L5A8MUK1 530 aa24.76■■□□□ 1.55
UBE3A-215ENST00000628267 ARID4AP29374 1257 aaPredicted RBP24.76■■□□□ 1.55
UBE3A-215ENST00000628267 PI16Q6UXB8 463 aa24.76■■□□□ 1.55
UBE3A-215ENST00000628267 TBC1D9Q6ZT07 1266 aa24.76■■□□□ 1.55
UBE3A-215ENST00000628267 AS3MTQ9HBK9 375 aa24.76■■□□□ 1.55
UBE3A-215ENST00000628267 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.76■■□□□ 1.55
UBE3A-215ENST00000628267 LOC285556D6RIA3 1793 aa24.75■■□□□ 1.55
UBE3A-215ENST00000628267 HMGCS2P54868 508 aa24.75■■□□□ 1.55
UBE3A-215ENST00000628267 SH3D19Q5HYK7 790 aa24.75■■□□□ 1.55
UBE3A-215ENST00000628267 ATAD5Q96QE3 1844 aa24.75■■□□□ 1.55
UBE3A-215ENST00000628267 NECAB2Q7Z6G3 386 aa24.74■■□□□ 1.55
UBE3A-215ENST00000628267 TEX11Q8IYF3 940 aa24.74■■□□□ 1.55
UBE3A-215ENST00000628267 PAWRQ96IZ0 340 aaKnown RBP24.74■■□□□ 1.55
UBE3A-215ENST00000628267 NOL10Q9BSC4 688 aaKnown RBP24.74■■□□□ 1.55
UBE3A-215ENST00000628267 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.74■■□□□ 1.553e-16■■■□□ 18.7
UBE3A-215ENST00000628267 ASCC2Q9H1I8 757 aaPredicted RBP24.74■■□□□ 1.55
UBE3A-215ENST00000628267 LRP2BPQ9P2M1 347 aa24.74■■□□□ 1.55
UBE3A-215ENST00000628267 PI4KBQ9UBF8 816 aa24.74■■□□□ 1.55
UBE3A-215ENST00000628267 HMGCRP04035 888 aa24.73■■□□□ 1.55
UBE3A-215ENST00000628267 UQCRFS1P1P0C7P4 283 aa24.73■■□□□ 1.55
UBE3A-215ENST00000628267 G3BP1Q13283 466 aaKnown RBP eCLIP24.73■■□□□ 1.55
UBE3A-215ENST00000628267 ANKLE1Q8NAG6 615 aa24.73■■□□□ 1.55
UBE3A-215ENST00000628267 DHX36Q9H2U1 1008 aaKnown RBP24.73■■□□□ 1.55
UBE3A-215ENST00000628267 IPO8O15397 1037 aaKnown RBP24.72■■□□□ 1.55
UBE3A-215ENST00000628267 GNAI2P04899 355 aa24.72■■□□□ 1.55
UBE3A-215ENST00000628267 MCAMP43121 646 aa24.72■■□□□ 1.55
UBE3A-215ENST00000628267 GJD2Q9UKL4 321 aa24.72■■□□□ 1.55
UBE3A-215ENST00000628267 RPTORQ8N122 1335 aa24.71■■□□□ 1.55
UBE3A-215ENST00000628267 BAG3O95817 575 aa24.71■■□□□ 1.55
UBE3A-215ENST00000628267 RRP1BQ14684 758 aaKnown RBP24.71■■□□□ 1.55
UBE3A-215ENST00000628267 WDR18Q9BV38 432 aa24.71■■□□□ 1.55
UBE3A-215ENST00000628267 HMX1Q9NP08 348 aaPredicted RBP24.71■■□□□ 1.55
UBE3A-215ENST00000628267 MORF4L1Q9UBU8 362 aa24.71■■□□□ 1.55
UBE3A-215ENST00000628267 SZT2Q5T011 3432 aa24.7■■□□□ 1.55
UBE3A-215ENST00000628267 RANBP2P49792 3224 aaKnown RBP24.7■■□□□ 1.54
UBE3A-215ENST00000628267 PLCG2P16885 1265 aa24.7■■□□□ 1.54
UBE3A-215ENST00000628267 SH3RF3Q8TEJ3 882 aaPredicted RBP24.7■■□□□ 1.54
UBE3A-215ENST00000628267 ASNSP08243 561 aa24.69■■□□□ 1.54
UBE3A-215ENST00000628267 STAP2Q9UGK3 403 aa24.69■■□□□ 1.54
UBE3A-215ENST00000628267 PNMA6EA0A0J9YXQ4 647 aa24.68■■□□□ 1.54
UBE3A-215ENST00000628267 HOXA7P31268 230 aaPredicted RBP24.68■■□□□ 1.54
UBE3A-215ENST00000628267 BACE1P56817 501 aa24.68■■□□□ 1.54
UBE3A-215ENST00000628267 IRX3P78415 501 aaPredicted RBP24.68■■□□□ 1.54
UBE3A-215ENST00000628267 NAA16Q6N069 864 aaPredicted RBP24.68■■□□□ 1.54
UBE3A-215ENST00000628267 FOXP4Q8IVH2 680 aaPredicted RBP24.68■■□□□ 1.54
UBE3A-215ENST00000628267 TMOD4Q9NZQ9 345 aa24.68■■□□□ 1.54
UBE3A-215ENST00000628267 C19orf81C9J6K1 198 aa24.67■■□□□ 1.54
UBE3A-215ENST00000628267 TRIM27P14373 513 aa24.67■■□□□ 1.54
UBE3A-215ENST00000628267 PPP4CP60510 307 aa24.67■■□□□ 1.54
UBE3A-215ENST00000628267 MTMR2Q13614 643 aa24.67■■□□□ 1.54
UBE3A-215ENST00000628267 DIS3LQ8TF46 1054 aaKnown RBP24.67■■□□□ 1.54
UBE3A-215ENST00000628267 NBPF3Q9H094 633 aa24.67■■□□□ 1.54
UBE3A-215ENST00000628267 GPR108Q9NPR9 543 aa24.67■■□□□ 1.54
UBE3A-215ENST00000628267 GINM1Q9NU53 330 aa24.67■■□□□ 1.54
UBE3A-215ENST00000628267 AATFQ9NY61 560 aaKnown RBP eCLIP24.67■■□□□ 1.54
UBE3A-215ENST00000628267 IGSF3O75054 1194 aa24.66■■□□□ 1.54
UBE3A-215ENST00000628267 CCDC158Q5M9N0 1113 aa24.66■■□□□ 1.54
UBE3A-215ENST00000628267 ATF7IPQ6VMQ6 1270 aa24.66■■□□□ 1.54
UBE3A-215ENST00000628267 METTL16Q86W50 562 aaKnown RBP24.66■■□□□ 1.54
UBE3A-215ENST00000628267 ALPK3Q96L96 1907 aa24.65■■□□□ 1.54
UBE3A-215ENST00000628267 BMP8BP34820 402 aa24.65■■□□□ 1.54
UBE3A-215ENST00000628267 TTC39AQ5SRH9 613 aa24.65■■□□□ 1.54
UBE3A-215ENST00000628267 CRACR2BQ8N4Y2 399 aaPredicted RBP24.65■■□□□ 1.54
UBE3A-215ENST00000628267 TGFBRAP1Q8WUH2 860 aa24.65■■□□□ 1.54
UBE3A-215ENST00000628267 P2RX7Q99572 595 aaKnown RBP24.65■■□□□ 1.54
UBE3A-215ENST00000628267 TRIM34Q9BYJ4 488 aa24.65■■□□□ 1.54
UBE3A-215ENST00000628267 SIPA1L1O43166 1804 aa24.64■■□□□ 1.54
UBE3A-215ENST00000628267 USP17L10C9JJH3 530 aa24.64■■□□□ 1.54
UBE3A-215ENST00000628267 XRCC5P13010 732 aaKnown RBP24.64■■□□□ 1.54
UBE3A-215ENST00000628267 TRIM32Q13049 653 aa24.64■■□□□ 1.54
UBE3A-215ENST00000628267 GPRC5AQ8NFJ5 357 aa24.64■■□□□ 1.54
UBE3A-215ENST00000628267 TRIB2Q92519 343 aa24.64■■□□□ 1.54
UBE3A-215ENST00000628267 GDF15Q99988 308 aa24.64■■□□□ 1.54
UBE3A-215ENST00000628267 NUDT12Q9BQG2 462 aa24.64■■□□□ 1.54
UBE3A-215ENST00000628267 SNRKQ9NRH2 765 aa24.64■■□□□ 1.54
UBE3A-215ENST00000628267 FLT1P17948 1338 aa24.63■■□□□ 1.53
UBE3A-215ENST00000628267 PLXNB2O15031 1838 aa24.63■■□□□ 1.53
UBE3A-215ENST00000628267 CYP2B6P20813 491 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms