RNA–Protein interactions for RNA: ENST00000627144.2

SMIM7-221, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene SMIM7, Length 2,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-221ENST00000627144 LRP2BPQ9P2M1 347 aa11.91□□□□□ -0.5
SMIM7-221ENST00000627144 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
SMIM7-221ENST00000627144 SSRP1Q08945 709 aaKnown RBP11.91□□□□□ -0.5
SMIM7-221ENST00000627144 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
SMIM7-221ENST00000627144 SLC10A5Q5PT55 438 aa11.91□□□□□ -0.5
SMIM7-221ENST00000627144 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
SMIM7-221ENST00000627144 TIGD1Q96MW7 591 aa11.91□□□□□ -0.5
SMIM7-221ENST00000627144 RNF41Q9H4P4 317 aaPredicted RBP11.91□□□□□ -0.5
SMIM7-221ENST00000627144 TFCP2L1Q9NZI6 479 aa11.91□□□□□ -0.5
SMIM7-221ENST00000627144 NRBP1Q9UHY1 535 aa11.91□□□□□ -0.5
SMIM7-221ENST00000627144 PFKFB1P16118 471 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 GNL2Q13823 731 aaKnown RBP11.9□□□□□ -0.5
SMIM7-221ENST00000627144 UBE4AQ14139 1066 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 PTPAQ15257 358 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 ERFEQ4G0M1 354 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 TMTC2Q8N394 836 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 MAP3K14Q99558 947 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
SMIM7-221ENST00000627144 PRDM4Q9UKN5 801 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
SMIM7-221ENST00000627144 TAF1P21675 1872 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 SLC3A2P08195 630 aaKnown RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 ADRA2BP18089 450 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 GTF2F1P35269 517 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 WTAPQ15007 396 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 ZRSR1Q15695 479 aaKnown RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 AOPEPQ8N6M6 819 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 ERCC4Q92889 916 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 SLC26A6Q9BXS9 759 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 BSDC1Q9NW68 430 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 HPSEQ9Y251 543 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 A0A087WWV3 80 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 ERICH2A1L162 156 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 NEMFO60524 1076 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 CYP7A1P22680 504 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 PPARAQ07869 468 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 LRMPQ12912 555 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 CCDC144BQ3MJ40 725 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-221ENST00000627144 ANAPC4Q9UJX5 808 aa11.89□□□□□ -0.51
SMIM7-221ENST00000627144 CACNA1SQ13698 1873 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 COL1A1P02452 1464 aaPredicted RBP11.88□□□□□ -0.51
SMIM7-221ENST00000627144 CCDC196A0A1B0GTZ2 297 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 GYS1P13807 737 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 RTN1Q16799 776 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 DPCR1Q3MIW9 517 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 RRP12Q5JTH9 1297 aaKnown RBP11.88□□□□□ -0.51
SMIM7-221ENST00000627144 COL23A1Q86Y22 540 aaPredicted RBP11.88□□□□□ -0.51
SMIM7-221ENST00000627144 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 IPO4Q8TEX9 1081 aaKnown RBP11.88□□□□□ -0.51
SMIM7-221ENST00000627144 CACTINQ8WUQ7 758 aaKnown RBP11.88□□□□□ -0.51
SMIM7-221ENST00000627144 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
SMIM7-221ENST00000627144 NLRP3Q96P20 1036 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 PDCL3Q9H2J4 239 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 MAGEB6P1A0A0J9YX57 407 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 SYKP43405 635 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 NLRP12P59046 1061 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 SF3B2Q13435 895 aaKnown RBP11.88□□□□□ -0.51
SMIM7-221ENST00000627144 ADGRA1Q86SQ6 560 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 MAP7D2Q96T17 732 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 TOMM22Q9NS69 142 aa11.88□□□□□ -0.51
SMIM7-221ENST00000627144 GOLGB1Q14789 3259 aaKnown RBP11.87□□□□□ -0.51
SMIM7-221ENST00000627144 CUTAO60888 179 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 DEXIO95424 95 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 MMP1P03956 469 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 GYG1P46976 350 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 CHAF1AQ13111 956 aaPredicted RBP11.87□□□□□ -0.51
SMIM7-221ENST00000627144 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 SAFBQ15424 915 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMIM7-221ENST00000627144 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 RESP18Q5W5W9 173 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 SHC4Q6S5L8 630 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 NBPF11Q86T75 865 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 NOSTRINQ8IVI9 506 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 LRRC8AQ8IWT6 810 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 ZKSCAN3Q9BRR0 538 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 RIOK1Q9BRS2 568 aaKnown RBP11.87□□□□□ -0.51
SMIM7-221ENST00000627144 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 ABCF2Q9UG63 623 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 MINPP1Q9UNW1 487 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 MYH13Q9UKX3 1938 aa11.87□□□□□ -0.51
SMIM7-221ENST00000627144 UBE2Q2LH0YL09 131 aa11.86□□□□□ -0.51
SMIM7-221ENST00000627144 BAG6P46379 1132 aa11.86□□□□□ -0.51
SMIM7-221ENST00000627144 NFIXQ14938 502 aa11.86□□□□□ -0.51
SMIM7-221ENST00000627144 C3orf67Q6ZVT6 689 aa11.86□□□□□ -0.51
SMIM7-221ENST00000627144 SDR42E1Q8WUS8 393 aa11.86□□□□□ -0.51
SMIM7-221ENST00000627144 ESR2Q92731 530 aa11.86□□□□□ -0.51
SMIM7-221ENST00000627144 UBAC1Q9BSL1 405 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms