RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 NPHS2Q9NP85 383 aa5.32□□□□□ -1.56
CHD2-203ENST00000625243 TMEM238LA0A1B0GVL6 79 aa5.31□□□□□ -1.56
CHD2-203ENST00000625243 FAM155AB1AL88 458 aaPredicted RBP5.31□□□□□ -1.56
CHD2-203ENST00000625243 EOMESO95936 686 aa5.31□□□□□ -1.56
CHD2-203ENST00000625243 NEFLP07196 543 aa5.31□□□□□ -1.56
CHD2-203ENST00000625243 RAC2P15153 192 aa5.31□□□□□ -1.56
CHD2-203ENST00000625243 SF3B2Q13435 895 aaKnown RBP5.31□□□□□ -1.56
CHD2-203ENST00000625243 CDKAL1Q5VV42 579 aa5.31□□□□□ -1.56
CHD2-203ENST00000625243 PBXIP1Q96AQ6 731 aa5.31□□□□□ -1.56
CHD2-203ENST00000625243 PRDM5Q9NQX1 630 aaPredicted RBP5.31□□□□□ -1.56
CHD2-203ENST00000625243 SEMA3GQ9NS98 782 aa5.31□□□□□ -1.56
CHD2-203ENST00000625243 A0A0G2JLL6 359 aaPredicted RBP5.3□□□□□ -1.56
CHD2-203ENST00000625243 FKBP4Q02790 459 aaKnown RBP eCLIP5.3□□□□□ -1.56
CHD2-203ENST00000625243 PPP2R3AQ06190 1150 aa5.3□□□□□ -1.56
CHD2-203ENST00000625243 PRPF40BQ6NWY9 871 aaKnown RBP5.3□□□□□ -1.56
CHD2-203ENST00000625243 PDZD3Q86UT5 571 aa5.3□□□□□ -1.56
CHD2-203ENST00000625243 SYN1P17600 705 aa5.29□□□□□ -1.56
CHD2-203ENST00000625243 TTC6Q86TZ1 520 aa5.29□□□□□ -1.56
CHD2-203ENST00000625243 ALPK1Q96QP1 1244 aa5.29□□□□□ -1.56
CHD2-203ENST00000625243 TMEM39AQ9NV64 488 aa5.29□□□□□ -1.56
CHD2-203ENST00000625243 SLAMF8Q9P0V8 285 aa5.29□□□□□ -1.56
CHD2-203ENST00000625243 GPN3Q9UHW5 284 aaPredicted RBP5.29□□□□□ -1.56
CHD2-203ENST00000625243 MAPK8IP1Q9UQF2 711 aa5.29□□□□□ -1.56
CHD2-203ENST00000625243 CSADQ9Y600 493 aa5.29□□□□□ -1.56
CHD2-203ENST00000625243 H3BS24 57 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 CPNE3O75131 537 aaKnown RBP5.28□□□□□ -1.56
CHD2-203ENST00000625243 GADD45BO75293 160 aaPredicted RBP5.28□□□□□ -1.56
CHD2-203ENST00000625243 SSFA2P28290 1259 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 PPM1JQ5JR12 505 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 MAP1SQ66K74 1059 aaPredicted RBP5.28□□□□□ -1.56
CHD2-203ENST00000625243 UBE3DQ7Z6J8 389 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 SULF2Q8IWU5 870 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 STK35Q8TDR2 534 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 ANO2Q9NQ90 1003 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 PICK1Q9NRD5 415 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 TRAK1Q9UPV9 953 aa5.28□□□□□ -1.56
CHD2-203ENST00000625243 PRR33A8MZF0 331 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 ABL1P00519 1130 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 SRFP11831 508 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 ORC1Q13415 861 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 NFIXQ14938 502 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 CDC37L1Q7L3B6 337 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 GPBAR1Q8TDU6 330 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 MYLIPQ8WY64 445 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 ACSBG1Q96GR2 724 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 MTMR7Q9Y216 660 aa5.27□□□□□ -1.57
CHD2-203ENST00000625243 ARNTP27540 789 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 NTF4P34130 210 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 ERVFC1P60507 584 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 DTHD1Q6ZMT9 781 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 ARMCX6Q7L4S7 300 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 MFSD4AQ8N468 514 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 CCDC74AQ96AQ1 378 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 BRPF3Q9ULD4 1205 aa5.26□□□□□ -1.57
CHD2-203ENST00000625243 HK2P52789 917 aa5.25□□□□□ -1.57
CHD2-203ENST00000625243 FGD1P98174 961 aa5.25□□□□□ -1.57
CHD2-203ENST00000625243 ZNF211Q13398 564 aaPredicted RBP5.25□□□□□ -1.57
CHD2-203ENST00000625243 GRM2Q14416 872 aa5.25□□□□□ -1.57
CHD2-203ENST00000625243 GGNQ86UU5 652 aa5.25□□□□□ -1.57
CHD2-203ENST00000625243 BAHD1Q8TBE0 780 aaPredicted RBP5.25□□□□□ -1.57
CHD2-203ENST00000625243 UBE2FQ969M7 185 aa5.25□□□□□ -1.57
CHD2-203ENST00000625243 KCNC2Q96PR1 638 aa5.25□□□□□ -1.57
CHD2-203ENST00000625243 TPX2Q9ULW0 747 aaKnown RBP5.25□□□□□ -1.57
CHD2-203ENST00000625243 CNTNAP4Q9C0A0 1308 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 DNAJC25-GNG10A0A024R161 153 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 DCDC2CA8MYV0 355 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 SLITRK5O94991 958 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 KRTAP10-2P60368 255 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 DLG4P78352 724 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 SFRP5Q5T4F7 317 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 THAP5Q7Z6K1 395 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 PRRT2Q7Z6L0 340 aaPredicted RBP5.24□□□□□ -1.57
CHD2-203ENST00000625243 C12orf40Q86WS4 652 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 EMILIN2Q9BXX0 1053 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 DNAJC25Q9H1X3 360 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 CBX8Q9HC52 389 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 ZSWIM5Q9P217 1185 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 ST14Q9Y5Y6 855 aa5.24□□□□□ -1.57
CHD2-203ENST00000625243 FANCGO15287 622 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 LRIG2O94898 1065 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 FCGRTP55899 365 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 RALGPS1Q5JS13 557 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 ZBTB37Q5TC79 503 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 TCERG1LQ5VWI1 586 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 MPRIPQ6WCQ1 1025 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 C22orf34Q6ZV56 151 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 MARCH10Q8NA82 808 aaPredicted RBP5.23□□□□□ -1.57
CHD2-203ENST00000625243 CNOT6Q9ULM6 557 aaKnown RBP5.23□□□□□ -1.57
CHD2-203ENST00000625243 CAPN6Q9Y6Q1 641 aa5.23□□□□□ -1.57
CHD2-203ENST00000625243 EIF1AYO14602 144 aaKnown RBP5.22□□□□□ -1.57
CHD2-203ENST00000625243 HPXP02790 462 aa5.22□□□□□ -1.57
CHD2-203ENST00000625243 NME2P22392 152 aa5.22□□□□□ -1.57
CHD2-203ENST00000625243 TRHRP34981 398 aaPredicted RBP5.22□□□□□ -1.57
CHD2-203ENST00000625243 RING1Q06587 406 aa5.22□□□□□ -1.57
CHD2-203ENST00000625243 KCT2Q8NC54 265 aa5.22□□□□□ -1.57
CHD2-203ENST00000625243 CXorf38Q8TB03 319 aa5.22□□□□□ -1.57
CHD2-203ENST00000625243 EPS8L3Q8TE67 593 aaKnown RBP5.22□□□□□ -1.57
CHD2-203ENST00000625243 MCOLN1Q9GZU1 580 aa5.22□□□□□ -1.57
CHD2-203ENST00000625243 RNF32Q9H0A6 362 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms