RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 HTATIP2Q9BUP3 242 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 AGTPBP1Q9UPW5 1226 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 TNNQ9UQP3 1299 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 SLC45A1Q9Y2W3 748 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 GPR75-ASB3A0A0A6YYF3 556 aa13.55□□□□□ -0.24
LINC00963-214ENST00000622680 ZBTB22O15209 634 aa13.55□□□□□ -0.24
LINC00963-214ENST00000622680 MVPQ14764 893 aaKnown RBP13.55□□□□□ -0.24
LINC00963-214ENST00000622680 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
LINC00963-214ENST00000622680 DEFB118Q96PH6 123 aa13.55□□□□□ -0.24
LINC00963-214ENST00000622680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.55□□□□□ -0.24
LINC00963-214ENST00000622680 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
LINC00963-214ENST00000622680 SGPL1O95470 568 aa13.54□□□□□ -0.24
LINC00963-214ENST00000622680 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
LINC00963-214ENST00000622680 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
LINC00963-214ENST00000622680 HMGCS2P54868 508 aa13.54□□□□□ -0.24
LINC00963-214ENST00000622680 RRP1BQ14684 758 aaKnown RBP13.54□□□□□ -0.24
LINC00963-214ENST00000622680 SPATA5Q8NB90 893 aa13.54□□□□□ -0.24
LINC00963-214ENST00000622680 NSUN4Q96CB9 384 aaKnown RBP13.54□□□□□ -0.24
LINC00963-214ENST00000622680 AKAP2Q9Y2D5 859 aa13.54□□□□□ -0.24
LINC00963-214ENST00000622680 PLXNA1Q9UIW2 1896 aa13.54□□□□□ -0.24
LINC00963-214ENST00000622680 RLFQ13129 1914 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 ZBTB7BO15156 539 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-214ENST00000622680 ARID4AP29374 1257 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-214ENST00000622680 MCAMP43121 646 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 SPP2Q13103 211 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 MTX1Q13505 466 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 IRF5Q13568 498 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 FAM110CQ1W6H9 321 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 DIS3LQ8TF46 1054 aaKnown RBP13.53□□□□□ -0.24
LINC00963-214ENST00000622680 OSBPL5Q9H0X9 879 aaPredicted RBP13.53□□□□□ -0.24
LINC00963-214ENST00000622680 PRO3102Q9H379 93 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 RAI14Q9P0K7 980 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 HDAC5Q9UQL6 1122 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 LTBP2Q14767 1821 aa13.53□□□□□ -0.24
LINC00963-214ENST00000622680 UNC80Q8N2C7 3258 aa13.52□□□□□ -0.24
LINC00963-214ENST00000622680 PNMA6EA0A0J9YXQ4 647 aa13.52□□□□□ -0.25
LINC00963-214ENST00000622680 TBC1D12O60347 775 aa13.52□□□□□ -0.25
LINC00963-214ENST00000622680 GNAI3P08754 354 aa13.52□□□□□ -0.25
LINC00963-214ENST00000622680 GORABQ5T7V8 394 aa13.52□□□□□ -0.25
LINC00963-214ENST00000622680 TEX11Q8IYF3 940 aa13.52□□□□□ -0.25
LINC00963-214ENST00000622680 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
LINC00963-214ENST00000622680 PXYLP1Q8TE99 480 aa13.52□□□□□ -0.25
LINC00963-214ENST00000622680 SH3RF3Q8TEJ3 882 aaPredicted RBP13.52□□□□□ -0.25
LINC00963-214ENST00000622680 COA7Q96BR5 231 aa13.52□□□□□ -0.25
LINC00963-214ENST00000622680 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.25
LINC00963-214ENST00000622680 PNMA3Q9UL41 463 aa13.52□□□□□ -0.25
LINC00963-214ENST00000622680 A0A0G2JMZ2 1700 aa13.51□□□□□ -0.25
LINC00963-214ENST00000622680 EVI5O60447 810 aa13.51□□□□□ -0.25
LINC00963-214ENST00000622680 PEX10O60683 326 aa13.51□□□□□ -0.25
LINC00963-214ENST00000622680 TFRCP02786 760 aaKnown RBP13.51□□□□□ -0.25
LINC00963-214ENST00000622680 TRIM32Q13049 653 aa13.51□□□□□ -0.25
LINC00963-214ENST00000622680 SHROOM1Q2M3G4 852 aaPredicted RBP13.51□□□□□ -0.25
LINC00963-214ENST00000622680 ZNF280CQ8ND82 737 aa13.51□□□□□ -0.25
LINC00963-214ENST00000622680 PAWRQ96IZ0 340 aaKnown RBP13.51□□□□□ -0.25
LINC00963-214ENST00000622680 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■■□□□ 13.3
LINC00963-214ENST00000622680 ASCC2Q9H1I8 757 aaPredicted RBP13.51□□□□□ -0.25
LINC00963-214ENST00000622680 SNRKQ9NRH2 765 aa13.51□□□□□ -0.25
LINC00963-214ENST00000622680 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
LINC00963-214ENST00000622680 SMCHD1A6NHR9 2005 aa13.51□□□□□ -0.25
LINC00963-214ENST00000622680 SOX1O00570 391 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-214ENST00000622680 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
LINC00963-214ENST00000622680 LDHCP07864 332 aa13.5□□□□□ -0.25
LINC00963-214ENST00000622680 TRIM27P14373 513 aa13.5□□□□□ -0.25
LINC00963-214ENST00000622680 CAP2P40123 477 aa13.5□□□□□ -0.25
LINC00963-214ENST00000622680 GSTO1P78417 241 aa13.5□□□□□ -0.25
LINC00963-214ENST00000622680 AATFQ9NY61 560 aaKnown RBP eCLIP13.5□□□□□ -0.256e-8■■■■□ 19.9
LINC00963-214ENST00000622680 HMGCRP04035 888 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 JAG1P78504 1218 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 MTMR2Q13614 643 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 ADGRA1Q86SQ6 560 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 ARHGAP45Q92619 1136 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 FRAT1Q92837 279 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-214ENST00000622680 CLUAP1Q96AJ1 413 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 CRISPLD2Q9H0B8 497 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 DNAJC18Q9H819 358 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 LRP2BPQ9P2M1 347 aa13.49□□□□□ -0.25
LINC00963-214ENST00000622680 EYSQ5T1H1 3165 aa13.48□□□□□ -0.25
LINC00963-214ENST00000622680 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
LINC00963-214ENST00000622680 BCAR3O75815 825 aa13.48□□□□□ -0.25
LINC00963-214ENST00000622680 GDF11O95390 407 aa13.48□□□□□ -0.25
LINC00963-214ENST00000622680 GNAI2P04899 355 aa13.48□□□□□ -0.25
LINC00963-214ENST00000622680 GCLCP48506 637 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-214ENST00000622680 G3BP1Q13283 466 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00963-214ENST00000622680 MAPKAPK5Q8IW41 473 aa13.48□□□□□ -0.25
LINC00963-214ENST00000622680 C7orf61Q8IZ16 206 aa13.48□□□□□ -0.25
LINC00963-214ENST00000622680 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
LINC00963-214ENST00000622680 FLT1P17948 1338 aa13.47□□□□□ -0.25
LINC00963-214ENST00000622680 IRX3P78415 501 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-214ENST00000622680 PABPC4Q13310 644 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC00963-214ENST00000622680 SH3D19Q5HYK7 790 aa13.47□□□□□ -0.25
LINC00963-214ENST00000622680 NAA16Q6N069 864 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-214ENST00000622680 TGFBRAP1Q8WUH2 860 aa13.47□□□□□ -0.25
LINC00963-214ENST00000622680 TRIB2Q92519 343 aa13.47□□□□□ -0.25
LINC00963-214ENST00000622680 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
LINC00963-214ENST00000622680 DBNDD2Q9BQY9 259 aa13.47□□□□□ -0.25
LINC00963-214ENST00000622680 NOL10Q9BSC4 688 aaKnown RBP13.47□□□□□ -0.25
LINC00963-214ENST00000622680 TBC1D2Q9BYX2 928 aa13.47□□□□□ -0.25
LINC00963-214ENST00000622680 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms