RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 OSBPL5Q9H0X9 879 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-221ENST00000619555 GPR108Q9NPR9 543 aa13.72□□□□□ -0.21
TARDBP-221ENST00000619555 DOCK3Q8IZD9 2030 aa13.72□□□□□ -0.21
TARDBP-221ENST00000619555 MGAMO43451 1857 aa13.72□□□□□ -0.21
TARDBP-221ENST00000619555 MAP4K4O95819 1239 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-221ENST00000619555 RLBP1P12271 317 aa13.71□□□□□ -0.21
TARDBP-221ENST00000619555 GRK4P32298 578 aa13.71□□□□□ -0.21
TARDBP-221ENST00000619555 FCGRTP55899 365 aa13.71□□□□□ -0.21
TARDBP-221ENST00000619555 PRKCZQ05513 592 aa13.71□□□□□ -0.21
TARDBP-221ENST00000619555 GABRQQ9UN88 632 aa13.71□□□□□ -0.21
TARDBP-221ENST00000619555 MYO5AQ9Y4I1 1855 aaKnown RBP13.7□□□□□ -0.22
TARDBP-221ENST00000619555 ZBTB7BO15156 539 aaPredicted RBP13.7□□□□□ -0.22
TARDBP-221ENST00000619555 SPP2Q13103 211 aa13.7□□□□□ -0.22
TARDBP-221ENST00000619555 CCDC158Q5M9N0 1113 aa13.7□□□□□ -0.22
TARDBP-221ENST00000619555 TREML2Q5T2D2 321 aa13.7□□□□□ -0.22
TARDBP-221ENST00000619555 NAA16Q6N069 864 aaPredicted RBP13.7□□□□□ -0.22
TARDBP-221ENST00000619555 ITPRIPQ8IWB1 547 aa13.7□□□□□ -0.22
TARDBP-221ENST00000619555 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
TARDBP-221ENST00000619555 AATFQ9NY61 560 aaKnown RBP eCLIP13.7□□□□□ -0.22
TARDBP-221ENST00000619555 SLC45A1Q9Y2W3 748 aa13.7□□□□□ -0.22
TARDBP-221ENST00000619555 TRIOBPQ9H2D6 2365 aa13.69□□□□□ -0.22
TARDBP-221ENST00000619555 CYP2E1P05181 493 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-221ENST00000619555 CAP2P40123 477 aa13.69□□□□□ -0.22
TARDBP-221ENST00000619555 ADGRA1Q86SQ6 560 aa13.69□□□□□ -0.22
TARDBP-221ENST00000619555 GCC1Q96CN9 775 aa13.69□□□□□ -0.22
TARDBP-221ENST00000619555 SHISA4Q96DD7 197 aa13.69□□□□□ -0.22
TARDBP-221ENST00000619555 NOL10Q9BSC4 688 aaKnown RBP13.69□□□□□ -0.22
TARDBP-221ENST00000619555 CCDC8Q9H0W5 538 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-221ENST00000619555 PIH1D3Q9NQM4 214 aaKnown RBP13.69□□□□□ -0.22
TARDBP-221ENST00000619555 TLR7Q9NYK1 1049 aaKnown RBP13.69□□□□□ -0.22
TARDBP-221ENST00000619555 BIN2Q9UBW5 565 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-221ENST00000619555 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
TARDBP-221ENST00000619555 AGTPBP1Q9UPW5 1226 aa13.69□□□□□ -0.22
TARDBP-221ENST00000619555 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
TARDBP-221ENST00000619555 COL2A1P02458 1487 aaPredicted RBP13.68□□□□□ -0.22
TARDBP-221ENST00000619555 BAG3O95817 575 aa13.68□□□□□ -0.22
TARDBP-221ENST00000619555 CCL5P13501 91 aa13.68□□□□□ -0.22
TARDBP-221ENST00000619555 ZAP70P43403 619 aa13.68□□□□□ -0.22
TARDBP-221ENST00000619555 PPP4CP60510 307 aa13.68□□□□□ -0.22
TARDBP-221ENST00000619555 MAPKAPK5Q8IW41 473 aa13.68□□□□□ -0.22
TARDBP-221ENST00000619555 ZNF280CQ8ND82 737 aa13.68□□□□□ -0.22
TARDBP-221ENST00000619555 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
TARDBP-221ENST00000619555 TGFBRAP1Q8WUH2 860 aa13.68□□□□□ -0.22
TARDBP-221ENST00000619555 ATAD5Q96QE3 1844 aa13.67□□□□□ -0.22
TARDBP-221ENST00000619555 FLT3LGP49771 235 aa13.67□□□□□ -0.22
TARDBP-221ENST00000619555 HMGCS2P54868 508 aa13.67□□□□□ -0.22
TARDBP-221ENST00000619555 HABP4Q5JVS0 413 aaKnown RBP13.67□□□□□ -0.22
TARDBP-221ENST00000619555 ANKRD13CQ8N6S4 541 aa13.67□□□□□ -0.22
TARDBP-221ENST00000619555 EAF2Q96CJ1 260 aaPredicted RBP13.67□□□□□ -0.22
TARDBP-221ENST00000619555 ZNF512BQ96KM6 892 aaPredicted RBP13.67□□□□□ -0.22
TARDBP-221ENST00000619555 RNF208Q9H0X6 261 aa13.67□□□□□ -0.22
TARDBP-221ENST00000619555 PI4KBQ9UBF8 816 aa13.67□□□□□ -0.22
TARDBP-221ENST00000619555 HERC5Q9UII4 1024 aaKnown RBP13.67□□□□□ -0.22
TARDBP-221ENST00000619555 SIPA1L1O43166 1804 aa13.67□□□□□ -0.22
TARDBP-221ENST00000619555 CDK5RAP2Q96SN8 1893 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 TNPO2O14787 897 aaKnown RBP13.66□□□□□ -0.22
TARDBP-221ENST00000619555 ADCY3O60266 1144 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 GJB1P08034 283 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 ELNP15502 786 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 PLCG2P16885 1265 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 DYNLL1P63167 89 aaKnown RBP13.66□□□□□ -0.22
TARDBP-221ENST00000619555 UBXN2AP68543 259 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 JAG1P78504 1218 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-221ENST00000619555 SLAIN1Q8ND83 568 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 UNC93B1Q9H1C4 597 aa13.66□□□□□ -0.22
TARDBP-221ENST00000619555 DHX36Q9H2U1 1008 aaKnown RBP13.66□□□□□ -0.22
TARDBP-221ENST00000619555 FLT1P17948 1338 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 H0YGN5 161 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 CYP7A1P22680 504 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 GJA8P48165 433 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-221ENST00000619555 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 PANK1Q8TE04 598 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 PCDH10Q9P2E7 1040 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 SAP30BPQ9UHR5 308 aaKnown RBP13.65□□□□□ -0.22
TARDBP-221ENST00000619555 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 PALD1Q9ULE6 856 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 NDUFB9Q9Y6M9 179 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 MAST2Q6P0Q8 1798 aa13.65□□□□□ -0.22
TARDBP-221ENST00000619555 LOC285556D6RIA3 1793 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 FAM110CQ1W6H9 321 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 FOXP4Q8IVH2 680 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-221ENST00000619555 NKX2-3Q8TAU0 364 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 WDR18Q9BV38 432 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 TBC1D2Q9BYX2 928 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 ASCC2Q9H1I8 757 aaPredicted RBP13.64□□□□□ -0.23
TARDBP-221ENST00000619555 AS3MTQ9HBK9 375 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 RCAN3Q9UKA8 241 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 EXOC6BQ9Y2D4 811 aa13.64□□□□□ -0.23
TARDBP-221ENST00000619555 FOCADQ5VW36 1801 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 IDH1O75874 414 aaKnown RBP13.63□□□□□ -0.23
TARDBP-221ENST00000619555 GDF11O95390 407 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 INHAP05111 366 aa13.63□□□□□ -0.23
TARDBP-221ENST00000619555 GCLCP48506 637 aaPredicted RBP13.63□□□□□ -0.23
TARDBP-221ENST00000619555 PABPC4Q13310 644 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms