RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 RCOR1Q9UKL0 485 aa20.42■□□□□ 0.86
CNOT3-209ENST00000617930 KIF3AQ9Y496 699 aa20.42■□□□□ 0.86
CNOT3-209ENST00000617930 SCN9AQ15858 1988 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 PRDM1O75626 825 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 SEC23AQ15436 765 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 DOK7Q18PE1 504 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 CHMP4CQ96CF2 233 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 PDLIM2Q96JY6 352 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 TSPY26PQ9H489 355 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 CYP2D6P10635 497 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 SLC12A7Q9Y666 1083 aa20.41■□□□□ 0.86
CNOT3-209ENST00000617930 BAZ2AQ9UIF9 1905 aaKnown RBP20.4■□□□□ 0.86
CNOT3-209ENST00000617930 PSDA5PKW4 1024 aaPredicted RBP20.4■□□□□ 0.86
CNOT3-209ENST00000617930 GOLGA8AA7E2F4 631 aa20.4■□□□□ 0.86
CNOT3-209ENST00000617930 DIXDC1Q155Q3 683 aa20.4■□□□□ 0.86
CNOT3-209ENST00000617930 SGIP1Q9BQI5 828 aa20.4■□□□□ 0.86
CNOT3-209ENST00000617930 KCNQ5Q9NR82 932 aa20.4■□□□□ 0.86
CNOT3-209ENST00000617930 CNKSR1Q969H4 720 aa20.39■□□□□ 0.86
CNOT3-209ENST00000617930 MXD3Q9BW11 206 aa20.39■□□□□ 0.86
CNOT3-209ENST00000617930 RNF41Q9H4P4 317 aaPredicted RBP20.39■□□□□ 0.86
CNOT3-209ENST00000617930 MKRN1Q9UHC7 482 aaKnown RBP20.39■□□□□ 0.86
CNOT3-209ENST00000617930 NID2Q14112 1375 aa20.39■□□□□ 0.85
CNOT3-209ENST00000617930 POLR3DP05423 398 aaPredicted RBP20.39■□□□□ 0.85
CNOT3-209ENST00000617930 WTAPQ15007 396 aa20.39■□□□□ 0.85
CNOT3-209ENST00000617930 CMTR1Q8N1G2 835 aaKnown RBP20.39■□□□□ 0.85
CNOT3-209ENST00000617930 CERS5Q8N5B7 392 aa20.39■□□□□ 0.85
CNOT3-209ENST00000617930 WDR66Q8TBY9 1149 aa20.39■□□□□ 0.85
CNOT3-209ENST00000617930 DACT1Q9NYF0 836 aa20.39■□□□□ 0.85
CNOT3-209ENST00000617930 CFAP45Q9UL16 551 aa20.39■□□□□ 0.85
CNOT3-209ENST00000617930 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
CNOT3-209ENST00000617930 C21orf2O43822 256 aa20.38■□□□□ 0.85
CNOT3-209ENST00000617930 NR1I2O75469 434 aa20.38■□□□□ 0.85
CNOT3-209ENST00000617930 GUCY1A2P33402 732 aa20.38■□□□□ 0.85
CNOT3-209ENST00000617930 ALG1Q9BT22 464 aa20.38■□□□□ 0.85
CNOT3-209ENST00000617930 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.38■□□□□ 0.85
CNOT3-209ENST00000617930 MYH2Q9UKX2 1941 aa20.38■□□□□ 0.85
CNOT3-209ENST00000617930 TNKSO95271 1327 aa20.38■□□□□ 0.85
CNOT3-209ENST00000617930 GTF2IP78347 998 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 KIF23Q02241 960 aaPredicted RBP20.37■□□□□ 0.85
CNOT3-209ENST00000617930 CAMK4Q16566 473 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 MTFR1LQ9H019 292 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 ADAMTSL1Q8N6G6 1762 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 FAM205AQ6ZU69 1335 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 NBPF11Q86T75 865 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 DZIP1Q86YF9 867 aaKnown RBP20.37■□□□□ 0.85
CNOT3-209ENST00000617930 ENAHQ8N8S7 591 aaPredicted RBP20.37■□□□□ 0.85
CNOT3-209ENST00000617930 MTA3Q9BTC8 594 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 RTFDC1Q9BY42 306 aaPredicted RBP20.37■□□□□ 0.85
CNOT3-209ENST00000617930 COA1Q9GZY4 146 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 DBNDD1Q9H9R9 158 aa20.37■□□□□ 0.85
CNOT3-209ENST00000617930 COL4A5P29400 1685 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 BRCA1P38398 1863 aaKnown RBP20.36■□□□□ 0.85
CNOT3-209ENST00000617930 LDHBP07195 334 aaKnown RBP20.36■□□□□ 0.85
CNOT3-209ENST00000617930 ESR2Q92731 530 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 ZC3H12CQ9C0D7 883 aaKnown RBP20.36■□□□□ 0.85
CNOT3-209ENST00000617930 GOLPH3LQ9H4A5 285 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 CLIC4Q9Y696 253 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 USP17L8P0C7I0 530 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 SLC4A8Q2Y0W8 1093 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 MFSD14BQ5SR56 506 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 KRT40Q6A162 431 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 ZNF654Q8IZM8 581 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 SH3RF3Q8TEJ3 882 aaPredicted RBP20.36■□□□□ 0.85
CNOT3-209ENST00000617930 CRNKL1Q9BZJ0 848 aaKnown RBP20.36■□□□□ 0.85
CNOT3-209ENST00000617930 ATP8A2Q9NTI2 1148 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 NOL7Q9UMY1 257 aaKnown RBP20.36■□□□□ 0.85
CNOT3-209ENST00000617930 MYH15Q9Y2K3 1946 aa20.36■□□□□ 0.85
CNOT3-209ENST00000617930 NMT2O60551 498 aa20.35■□□□□ 0.85
CNOT3-209ENST00000617930 LETM1O95202 739 aaPredicted RBP20.35■□□□□ 0.85
CNOT3-209ENST00000617930 IFNAR1P17181 557 aa20.35■□□□□ 0.85
CNOT3-209ENST00000617930 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
CNOT3-209ENST00000617930 SPTY2D1Q68D10 685 aaPredicted RBP20.35■□□□□ 0.85
CNOT3-209ENST00000617930 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.35■□□□□ 0.85
CNOT3-209ENST00000617930 ZSCAN10Q96SZ4 725 aaPredicted RBP20.35■□□□□ 0.85
CNOT3-209ENST00000617930 TAOK2Q9UL54 1235 aa20.35■□□□□ 0.85
CNOT3-209ENST00000617930 CDK5RAP2Q96SN8 1893 aa20.35■□□□□ 0.85
CNOT3-209ENST00000617930 FMNL1O95466 1100 aaPredicted RBP20.34■□□□□ 0.85
CNOT3-209ENST00000617930 MYSM1Q5VVJ2 828 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 CCDC82Q8N4S0 544 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 SLC26A6Q9BXS9 759 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 RTEL1Q9NZ71 1219 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 CCDC39Q9UFE4 941 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 CDKL5O76039 1030 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 TPM2P07951 284 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 PTGER2P43116 358 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 SART3Q15020 963 aaKnown RBP20.34■□□□□ 0.85
CNOT3-209ENST00000617930 SBK1Q52WX2 424 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 ATL3Q6DD88 541 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 TTLL6Q8N841 843 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 FANCBQ8NB91 859 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 SHISA4Q96DD7 197 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 ZNF396Q96N95 335 aaPredicted RBP20.34■□□□□ 0.85
CNOT3-209ENST00000617930 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
CNOT3-209ENST00000617930 GOLGA6L4A6NEF3 574 aa20.33■□□□□ 0.85
CNOT3-209ENST00000617930 RTN1Q16799 776 aa20.33■□□□□ 0.85
CNOT3-209ENST00000617930 AOC3Q16853 763 aa20.33■□□□□ 0.85
CNOT3-209ENST00000617930 FAM47AQ5JRC9 791 aa20.33■□□□□ 0.85
CNOT3-209ENST00000617930 LINC00301Q8NCQ3 95 aa20.33■□□□□ 0.85
CNOT3-209ENST00000617930 SNW1Q13573 536 aaKnown RBP20.32■□□□□ 0.84
CNOT3-209ENST00000617930 TMTC2Q8N394 836 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms