RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 OS9Q13438 667 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC3-208ENST00000616074 SH3RF3Q8TEJ3 882 aaPredicted RBP25.53■■□□□ 1.68
TRAPPC3-208ENST00000616074 FOCADQ5VW36 1801 aa25.53■■□□□ 1.68
TRAPPC3-208ENST00000616074 SHISA4Q96DD7 197 aa25.52■■□□□ 1.68
TRAPPC3-208ENST00000616074 GABRQQ9UN88 632 aa25.52■■□□□ 1.68
TRAPPC3-208ENST00000616074 AGTPBP1Q9UPW5 1226 aa25.52■■□□□ 1.68
TRAPPC3-208ENST00000616074 SURF6O75683 361 aaKnown RBP25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 RRP1BQ14684 758 aaKnown RBP25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 CCDC158Q5M9N0 1113 aa25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 TREML2Q5T2D2 321 aa25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 NAA16Q6N069 864 aaPredicted RBP25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 FTSJ3Q8IY81 847 aaKnown RBP25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 SMCR8Q8TEV9 937 aaPredicted RBP25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 AATFQ9NY61 560 aaKnown RBP eCLIP25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 PCDH10Q9P2E7 1040 aa25.51■■□□□ 1.67
TRAPPC3-208ENST00000616074 HABP4Q5JVS0 413 aaKnown RBP25.5■■□□□ 1.67
TRAPPC3-208ENST00000616074 NOL10Q9BSC4 688 aaKnown RBP25.5■■□□□ 1.67
TRAPPC3-208ENST00000616074 CYP2E1P05181 493 aaPredicted RBP25.49■■□□□ 1.67
TRAPPC3-208ENST00000616074 RLBP1P12271 317 aa25.49■■□□□ 1.67
TRAPPC3-208ENST00000616074 CAP2P40123 477 aa25.49■■□□□ 1.67
TRAPPC3-208ENST00000616074 SPP2Q13103 211 aa25.49■■□□□ 1.67
TRAPPC3-208ENST00000616074 ADGRA1Q86SQ6 560 aa25.49■■□□□ 1.67
TRAPPC3-208ENST00000616074 ITPRIPQ8IWB1 547 aa25.49■■□□□ 1.67
TRAPPC3-208ENST00000616074 BAG3O95817 575 aa25.48■■□□□ 1.67
TRAPPC3-208ENST00000616074 CCL5P13501 91 aa25.48■■□□□ 1.67
TRAPPC3-208ENST00000616074 PROCA1Q8NCQ7 364 aaPredicted RBP25.48■■□□□ 1.67
TRAPPC3-208ENST00000616074 ZNF280CQ8ND82 737 aa25.48■■□□□ 1.67
TRAPPC3-208ENST00000616074 SLAIN1Q8ND83 568 aa25.48■■□□□ 1.67
TRAPPC3-208ENST00000616074 BIN2Q9UBW5 565 aaPredicted RBP25.48■■□□□ 1.67
TRAPPC3-208ENST00000616074 HERC5Q9UII4 1024 aaKnown RBP25.48■■□□□ 1.67
TRAPPC3-208ENST00000616074 NOP58Q9Y2X3 529 aaKnown RBP25.48■■□□□ 1.67
TRAPPC3-208ENST00000616074 ZBTB7BO15156 539 aaPredicted RBP25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 UBXN2AP68543 259 aa25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 MIER1Q8N108 512 aa25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 ANKRD13CQ8N6S4 541 aa25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 ZNF512BQ96KM6 892 aaPredicted RBP25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 TLR7Q9NYK1 1049 aaKnown RBP25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 DBNLQ9UJU6 430 aaKnown RBP25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 PNMA3Q9UL41 463 aa25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 DOCK3Q8IZD9 2030 aa25.47■■□□□ 1.67
TRAPPC3-208ENST00000616074 TNPO2O14787 897 aaKnown RBP25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 ZAP70P43403 619 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 GJA8P48165 433 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 FLT3LGP49771 235 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 HMGCS2P54868 508 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 PPP4CP60510 307 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 MAPKAPK5Q8IW41 473 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 NKX2-3Q8TAU0 364 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 TGFBRAP1Q8WUH2 860 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 TBC1D2Q9BYX2 928 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 RNF208Q9H0X6 261 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 DHX36Q9H2U1 1008 aaKnown RBP25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 PI4KBQ9UBF8 816 aa25.46■■□□□ 1.67
TRAPPC3-208ENST00000616074 FLT1P17948 1338 aa25.45■■□□□ 1.66
TRAPPC3-208ENST00000616074 USP17L5A8MUK1 530 aa25.45■■□□□ 1.66
TRAPPC3-208ENST00000616074 GJB1P08034 283 aa25.45■■□□□ 1.66
TRAPPC3-208ENST00000616074 PLCG2P16885 1265 aa25.45■■□□□ 1.66
TRAPPC3-208ENST00000616074 CCDC8Q9H0W5 538 aaPredicted RBP25.45■■□□□ 1.66
TRAPPC3-208ENST00000616074 PIH1D3Q9NQM4 214 aaKnown RBP25.45■■□□□ 1.66
TRAPPC3-208ENST00000616074 CEP290O15078 2479 aa25.45■■□□□ 1.66
TRAPPC3-208ENST00000616074 ADCY3O60266 1144 aa25.44■■□□□ 1.66
TRAPPC3-208ENST00000616074 DNAJC18Q9H819 358 aa25.44■■□□□ 1.66
TRAPPC3-208ENST00000616074 ELNP15502 786 aa25.43■■□□□ 1.66
TRAPPC3-208ENST00000616074 FAM110CQ1W6H9 321 aa25.43■■□□□ 1.66
TRAPPC3-208ENST00000616074 EAF2Q96CJ1 260 aaPredicted RBP25.43■■□□□ 1.66
TRAPPC3-208ENST00000616074 UNC93B1Q9H1C4 597 aa25.43■■□□□ 1.66
TRAPPC3-208ENST00000616074 AS3MTQ9HBK9 375 aa25.43■■□□□ 1.66
TRAPPC3-208ENST00000616074 IRF5Q13568 498 aa25.42■■□□□ 1.66
TRAPPC3-208ENST00000616074 SH3D19Q5HYK7 790 aa25.42■■□□□ 1.66
TRAPPC3-208ENST00000616074 H0YGN5 161 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 IGSF3O75054 1194 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 INHAP05111 366 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 DYNLL1P63167 89 aaKnown RBP25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 JAG1P78504 1218 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 CEP85Q6P2H3 762 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 UBE2Q1Q7Z7E8 422 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 PXYLP1Q8TE99 480 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 U2AF1L4Q8WU68 220 aaKnown RBP25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 PALD1Q9ULE6 856 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 MYH1P12882 1939 aa25.41■■□□□ 1.66
TRAPPC3-208ENST00000616074 PABPC4Q13310 644 aaKnown RBP eCLIP25.4■■□□□ 1.661e-6■■■□□ 16.3
TRAPPC3-208ENST00000616074 MTMR2Q13614 643 aa25.4■■□□□ 1.66
TRAPPC3-208ENST00000616074 SHROOM1Q2M3G4 852 aaPredicted RBP25.4■■□□□ 1.66
TRAPPC3-208ENST00000616074 METTL16Q86W50 562 aaKnown RBP25.4■■□□□ 1.66
TRAPPC3-208ENST00000616074 COA7Q96BR5 231 aa25.4■■□□□ 1.66
TRAPPC3-208ENST00000616074 WDR18Q9BV38 432 aa25.4■■□□□ 1.66
TRAPPC3-208ENST00000616074 ASCC2Q9H1I8 757 aaPredicted RBP25.4■■□□□ 1.66
TRAPPC3-208ENST00000616074 COLQQ9Y215 455 aaPredicted RBP25.4■■□□□ 1.66
TRAPPC3-208ENST00000616074 ASNSP08243 561 aa25.39■■□□□ 1.66
TRAPPC3-208ENST00000616074 CYP7A1P22680 504 aa25.39■■□□□ 1.66
TRAPPC3-208ENST00000616074 GCLCP48506 637 aaPredicted RBP25.39■■□□□ 1.66
TRAPPC3-208ENST00000616074 FOXP4Q8IVH2 680 aaPredicted RBP25.39■■□□□ 1.66
TRAPPC3-208ENST00000616074 CRACR2BQ8N4Y2 399 aaPredicted RBP25.39■■□□□ 1.66
TRAPPC3-208ENST00000616074 SAP30BPQ9UHR5 308 aaKnown RBP25.39■■□□□ 1.66
TRAPPC3-208ENST00000616074 TAOK2Q9UL54 1235 aa25.39■■□□□ 1.66
TRAPPC3-208ENST00000616074 NDUFB9Q9Y6M9 179 aa25.39■■□□□ 1.66
TRAPPC3-208ENST00000616074 IDH1O75874 414 aaKnown RBP25.38■■□□□ 1.65
TRAPPC3-208ENST00000616074 GDF11O95390 407 aa25.38■■□□□ 1.65
TRAPPC3-208ENST00000616074 BACE1P56817 501 aa25.38■■□□□ 1.65
TRAPPC3-208ENST00000616074 TRIM34Q9BYJ4 488 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms