RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 IBTKQ9P2D0 1353 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-211ENST00000615798 GAS8O95995 478 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 CLTAP09496 248 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 ANGPTL2Q9UKU9 493 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 EPS15L1Q9UBC2 864 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 MSH6P52701 1360 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 IGHDP01880 384 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 LIG3P49916 1009 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 ZNF449Q6P9G9 518 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 RILPL1Q5EBL4 403 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 RNF40O75150 1001 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 TTF1Q15361 905 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 TTC39AQ5SRH9 613 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 CPLX3Q8WVH0 158 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 EVCP57679 992 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 STX3Q13277 289 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 ATP6V1E2Q96A05 226 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 TLK1Q9UKI8 766 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 SUFUQ9UMX1 484 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 YTHDC2Q9H6S0 1430 aaKnown RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 MYO1BO43795 1136 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 ARHGAP18Q8N392 663 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 ACRBPQ8NEB7 543 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 SLC38A10Q9HBR0 1119 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 TLDC2A0PJX2 215 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 KRT86O43790 486 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 UAP1Q16222 522 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 CALR3Q96L12 384 aaKnown RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 NAP1L4Q99733 375 aaKnown RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 DNAJC17Q9NVM6 304 aaKnown RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 RRP15Q9Y3B9 282 aaKnown RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 FOSL2P15408 326 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 PPP1R7Q15435 360 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 ACBD5Q5T8D3 534 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-211ENST00000615798 CCDC138Q96M89 665 aa10.3□□□□□ -0.76
COL12A1-211ENST00000615798 ZSCAN23Q3MJ62 389 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 SIRT1Q96EB6 747 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 CDR2Q01850 454 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 MTMR3Q13615 1198 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 RNF41Q9H4P4 317 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-211ENST00000615798 DDX28Q9NUL7 540 aaKnown RBP10.29□□□□□ -0.76
COL12A1-211ENST00000615798 REREQ9P2R6 1566 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 RAPGEF3O95398 923 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 SEPT2Q15019 361 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 FAM210AQ96ND0 272 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 MRPS26Q9BYN8 205 aaKnown RBP10.29□□□□□ -0.76
COL12A1-211ENST00000615798 SPC25Q9HBM1 224 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 NPHP3Q7Z494 1330 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 DAB1O75553 588 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 FLOT1O75955 427 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 UTP11Q9Y3A2 253 aaKnown RBP10.29□□□□□ -0.76
COL12A1-211ENST00000615798 S100A9P06702 114 aaKnown RBP10.29□□□□□ -0.76
COL12A1-211ENST00000615798 ZNF165P49910 485 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 FSIP1Q8NA03 581 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 FAM200AQ8TCP9 573 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 TEKT2Q9UIF3 430 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 UBASH3AP57075 661 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 TAF11Q15544 211 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 HARSP12081 509 aaKnown RBP10.29□□□□□ -0.76
COL12A1-211ENST00000615798 SERPINB6P35237 376 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 PPP4R3AQ6IN85 833 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 JPH2Q9BR39 696 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-211ENST00000615798 CSRNP2Q9H175 543 aa10.29□□□□□ -0.76
COL12A1-211ENST00000615798 HNRNPCL2B2RXH8 293 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 HNRNPCL1O60812 293 aaKnown RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 PPP4R1Q8TF05 950 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 RRP36Q96EU6 259 aaKnown RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 UTP14AQ9BVJ6 771 aaKnown RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 U2AF2P26368 475 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 RSBN1LQ6PCB5 846 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 TRPC1P48995 793 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 PSMC1P62191 440 aaKnown RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 RAB34Q9BZG1 259 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 GEN1Q17RS7 908 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 EFHD2Q96C19 240 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 STRN4Q9NRL3 753 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 RWDD2BP57060 319 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 DHX9Q08211 1270 aaKnown RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 TRAF1Q13077 416 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 ESCO1Q5FWF5 840 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 ANKRD20A3Q5VUR7 823 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 NECTIN2Q92692 538 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 SH3GL1Q99961 368 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 RAB14P61106 215 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 TNRQ92752 1358 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 LOC102724159A0A0B4J2E5 919 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 GIPC1O14908 333 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 ZSCAN22P10073 491 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 KRT4P19013 534 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 ITIH3Q06033 890 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 PWP2Q15269 919 aaKnown RBP10.28□□□□□ -0.76
COL12A1-211ENST00000615798 BAG5Q9UL15 447 aa10.28□□□□□ -0.76
COL12A1-211ENST00000615798 PRDM1O75626 825 aa10.27□□□□□ -0.76
COL12A1-211ENST00000615798 SECISBP2LQ93073 1101 aaKnown RBP10.27□□□□□ -0.76
COL12A1-211ENST00000615798 KLHL14Q9P2G3 628 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms