RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 E7EWF7 191 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
SNPH-203ENST00000614659 BICD1Q96G01 975 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 GOPCQ9HD26 462 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 TMEM63CQ9P1W3 806 aa16.57■□□□□ 0.24
SNPH-203ENST00000614659 LUC7L2Q9Y383 392 aaKnown RBP16.57■□□□□ 0.24
SNPH-203ENST00000614659 B4E1Z4 1266 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 ZBED4O75132 1171 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 CTSWP56202 376 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 ME3Q16798 604 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 IQCDQ96DY2 449 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 MAP3K15Q6ZN16 1313 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 OTUD7BQ6GQQ9 843 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 MIGA1Q8NAN2 632 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
SNPH-203ENST00000614659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNPH-203ENST00000614659 GADD45BO75293 160 aaPredicted RBP16.56■□□□□ 0.24
SNPH-203ENST00000614659 GRIPAP1Q4V328 841 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 GIGYF2Q6Y7W6 1299 aaKnown RBP16.56■□□□□ 0.24
SNPH-203ENST00000614659 ZNF408Q9H9D4 720 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 COPRSQ9NQ92 184 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 PCCAP05165 728 aaPredicted RBP16.56■□□□□ 0.24
SNPH-203ENST00000614659 TEKT1Q969V4 418 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 DCPSQ96C86 337 aaKnown RBP16.56■□□□□ 0.24
SNPH-203ENST00000614659 CCDC42Q96M95 316 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 RASAL2Q9UJF2 1139 aa16.56■□□□□ 0.24
SNPH-203ENST00000614659 KRT13P13646 458 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 WWC3Q9ULE0 1092 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 NCAPD2Q15021 1401 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 FANCCQ00597 558 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 ADALQ6DHV7 355 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 SYT10Q6XYQ8 523 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 ZBTB38Q8NAP3 1195 aaPredicted RBP16.55■□□□□ 0.24
SNPH-203ENST00000614659 CCDC113Q9H0I3 377 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 FSD2A1L4K1 749 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 CIAO1O76071 339 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 MCM7P33993 719 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 CUL4AQ13619 759 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 NUP58Q9BVL2 599 aa16.55■□□□□ 0.24
SNPH-203ENST00000614659 ZNF202O95125 648 aa16.54■□□□□ 0.24
SNPH-203ENST00000614659 MTMR6Q9Y217 621 aa16.54■□□□□ 0.24
SNPH-203ENST00000614659 AFF2P51816 1311 aa16.54■□□□□ 0.24
SNPH-203ENST00000614659 CRKLP46109 303 aaKnown RBP16.54■□□□□ 0.24
SNPH-203ENST00000614659 V9GYY5 206 aaPredicted RBP16.54■□□□□ 0.24
SNPH-203ENST00000614659 POLR1AO95602 1720 aaPredicted RBP16.54■□□□□ 0.24
SNPH-203ENST00000614659 EAPPQ56P03 285 aaPredicted RBP16.54■□□□□ 0.24
SNPH-203ENST00000614659 SPATA5Q8NB90 893 aa16.54■□□□□ 0.24
SNPH-203ENST00000614659 CNNM4Q6P4Q7 775 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 CYP26C1Q6V0L0 522 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 DIS3L2Q8IYB7 885 aaKnown RBP16.53■□□□□ 0.24
SNPH-203ENST00000614659 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 ANTXR1Q9H6X2 564 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 KRT40Q6A162 431 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 SV2BQ7L1I2 683 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 STMN4Q9H169 189 aaPredicted RBP16.53■□□□□ 0.24
SNPH-203ENST00000614659 LIG1P18858 919 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 MAATS1Q7Z4T9 603 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 ARHGAP6O43182 974 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 VWA3BQ502W6 1294 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 SULF1Q8IWU6 871 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 MAP4K1Q92918 833 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 ARMT1Q9H993 441 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 GPHNQ9NQX3 736 aaPredicted RBP16.53■□□□□ 0.24
SNPH-203ENST00000614659 ERBB3P21860 1342 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 SYNRGQ9UMZ2 1314 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 ADCY9O60503 1353 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 ABCA6Q8N139 1617 aa16.53■□□□□ 0.24
SNPH-203ENST00000614659 KAT6BQ8WYB5 2073 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 OVOS2A0A0G2JMS6 1433 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 OVOS2A0A0J9YW53 1432 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 OVOS2Q6IE36 1432 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 GSTTP1A0A1W2PQM5 241 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 BBOX1O75936 387 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 GTF2A1P52655 376 aaPredicted RBP16.52■□□□□ 0.24
SNPH-203ENST00000614659 KIAA0753Q2KHM9 967 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.24
SNPH-203ENST00000614659 REREQ9P2R6 1566 aa16.52■□□□□ 0.23
SNPH-203ENST00000614659 SEMA3EO15041 775 aa16.52■□□□□ 0.23
SNPH-203ENST00000614659 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.23
SNPH-203ENST00000614659 ZNF569Q5MCW4 686 aa16.52■□□□□ 0.23
SNPH-203ENST00000614659 SPECC1LQ69YQ0 1117 aa16.52■□□□□ 0.23
SNPH-203ENST00000614659 IPO4Q8TEX9 1081 aaKnown RBP16.52■□□□□ 0.23
SNPH-203ENST00000614659 EAF2Q96CJ1 260 aaPredicted RBP16.52■□□□□ 0.23
SNPH-203ENST00000614659 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 TTC38Q5R3I4 469 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 CCDC65Q8IXS2 484 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 CCDC155Q8N6L0 562 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 CCDC51Q96ER9 411 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 PTH1RQ03431 593 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 USPL1Q5W0Q7 1092 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 HDXQ7Z353 690 aa16.51■□□□□ 0.23
SNPH-203ENST00000614659 SMAP1Q8IYB5 467 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms