RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	TNR	Q92752	1358 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	INPP1	P49441	399 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	GRM8	O00222	908 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	XPOT	O43592	962 aa	Known RBP	13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	PRPSAP1	Q14558	356 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	ISM2	Q6H9L7	571 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	SMARCA5	O60264	1052 aa	Predicted RBP	13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	CCNT1	O60563	726 aa	Known RBP	13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	CEP85L	Q5SZL2	805 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	TRIM50	Q86XT4	487 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	NUCKS1	Q9H1E3	243 aa	Known RBP	13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	VCX3A	Q9NNX9	186 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	UGGT2	Q9NYU1	1516 aa		13.54	□□□□□ -0.24
ABCA2-223	ENST00000614293	PTGS1	P23219	599 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	CCNA1	P78396	465 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	CROCCP2	Q86T23	111 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	LMNB1	P20700	586 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	FBXW4	P57775	412 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	ZNF365	Q70YC5	407 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	ARFGAP2	Q8N6H7	521 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	EIF3D	O15371	548 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	GADL1	Q6ZQY3	521 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	PAG1	Q9NWQ8	432 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	GABPB1	Q06547	395 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	ZBTB8OS	Q8IWT0	167 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	PPP4R1	Q8TF05	950 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	PKD2L1	Q9P0L9	805 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	MCTP2	Q6DN12	878 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	SCAF11	Q99590	1463 aa	Known RBP	13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293		H0YCG3	227 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	ARHGEF16	Q5VV41	709 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	AP5M1	Q9H0R1	490 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	CHRNA2	Q15822	529 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	TMTC4	Q5T4D3	741 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	KIAA1841	Q6NSI8	718 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	SLC12A6	Q9UHW9	1150 aa		13.53	□□□□□ -0.24
ABCA2-223	ENST00000614293	ZNF165	P49910	485 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	NEDD9	Q14511	834 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	TMCO4	Q5TGY1	634 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	MAIP1	Q8WWC4	291 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	OGFR	Q9NZT2	677 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	PBRM1	Q86U86	1689 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	ATP8B3	O60423	1300 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	KRT81	Q14533	505 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	PARP10	Q53GL7	1025 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	BICRA	Q9NZM4	1560 aa		13.52	□□□□□ -0.24
ABCA2-223	ENST00000614293	GOLGA8Q	A0A0J9YX86	632 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	GOLGA8O	A6NCC3	632 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	GOLGA8N	F8WBI6	632 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	PRR16	Q569H4	304 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	GLG1	Q92896	1179 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	CHMP6	Q96FZ7	201 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	CLSTN2	Q9H4D0	955 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	PI4KAP2	A4QPH2	592 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	SPDYE2B	A6NHP3	402 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	SPDYE6	P0CI01	402 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	IRX4	P78413	519 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	ARHGAP27	Q6ZUM4	889 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	PI4KAP1	Q8N8J0	262 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	DLGAP5	Q15398	846 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	GBP1	P32455	592 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	ITK	Q08881	620 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	EXOC8	Q8IYI6	725 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	MLXIP	Q9HAP2	919 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	TSPOAP1	O95153	1857 aa		13.52	□□□□□ -0.25
ABCA2-223	ENST00000614293	IRS4	O14654	1257 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	NONO	Q15233	471 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	IQUB	Q8NA54	791 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	B4GALNT4	Q76KP1	1039 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	GPCPD1	Q9NPB8	672 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	PYGL	P06737	847 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	OSBP	P22059	807 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	RNF169	Q8NCN4	708 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	TBC1D22A	Q8WUA7	517 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	CHMP2A	O43633	222 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	C16orf45	Q96MC5	204 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	ARHGEF11	O15085	1522 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	RNF168	Q8IYW5	571 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	ELMOD1	Q8N336	334 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	MAP3K21	Q5TCX8	1036 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	PHLDB2	Q86SQ0	1253 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	METTL23	Q86XA0	190 aa		13.51	□□□□□ -0.25
ABCA2-223	ENST00000614293	DACT3	Q96B18	629 aa	Predicted RBP	13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	SDCCAG3	Q96C92	435 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	KCNA4	P22459	653 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	CCDC170	Q8IYT3	715 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	TNNC2	P02585	160 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	RBBP5	Q15291	538 aa	Known RBP	13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	KLHL40	Q2TBA0	621 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	AKAP4	Q5JQC9	854 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	FCHSD1	Q86WN1	690 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	ABCC5	O15440	1437 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	DNM3	Q9UQ16	869 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	NUP160	Q12769	1436 aa		13.5	□□□□□ -0.25
ABCA2-223	ENST00000614293	RNASEL	Q05823	741 aa	Known RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms