RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 PROM2Q8N271 834 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 JMYQ8N9B5 988 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 COL4A1P02462 1669 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 EFCAB8A8MWE9 144 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 NPHP1O15259 732 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 MNS1Q8NEH6 495 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 DNAI1Q9UI46 699 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 CPLX1O14810 134 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 POLR3DP05423 398 aaPredicted RBP12.88□□□□□ -0.35
ATF3-211ENST00000613954 GYS1P13807 737 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 PFKFB1P16118 471 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 MYL5Q02045 173 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 PI16Q6UXB8 463 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
ATF3-211ENST00000613954 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.35
ATF3-211ENST00000613954 ORC3Q9UBD5 711 aaPredicted RBP12.88□□□□□ -0.35
ATF3-211ENST00000613954 AKAP11Q9UKA4 1901 aa12.87□□□□□ -0.35
ATF3-211ENST00000613954 PPP6R2O75170 966 aa12.87□□□□□ -0.35
ATF3-211ENST00000613954 APBA3O96018 575 aa12.87□□□□□ -0.35
ATF3-211ENST00000613954 PNMA6AP0CW24 399 aaPredicted RBP12.87□□□□□ -0.35
ATF3-211ENST00000613954 UBASH3AP57075 661 aa12.87□□□□□ -0.35
ATF3-211ENST00000613954 RPS8P62241 208 aaKnown RBP12.87□□□□□ -0.35
ATF3-211ENST00000613954 SLC39A14Q15043 492 aa12.87□□□□□ -0.35
ATF3-211ENST00000613954 AXDND1Q5T1B0 1012 aaPredicted RBP12.87□□□□□ -0.35
ATF3-211ENST00000613954 TMX1Q9H3N1 280 aa12.87□□□□□ -0.35
ATF3-211ENST00000613954 BIN1O00499 593 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 ZRANB2O95218 330 aaKnown RBP eCLIP12.86□□□□□ -0.35
ATF3-211ENST00000613954 SERPINC1P01008 464 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
ATF3-211ENST00000613954 CYP2C19P33261 490 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 SYKP43405 635 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 KIF23Q02241 960 aaPredicted RBP12.86□□□□□ -0.35
ATF3-211ENST00000613954 UBE4AQ14139 1066 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
ATF3-211ENST00000613954 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 A0A1B0GUL6 1792 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 SNAP23O00161 211 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 ARHGAP6O43182 974 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 PRC1O43663 620 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 VSTM4Q8IW00 320 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 CCDC24Q8N4L8 307 aa12.86□□□□□ -0.35
ATF3-211ENST00000613954 TNRC6CQ9HCJ0 1690 aaKnown RBP12.85□□□□□ -0.35
ATF3-211ENST00000613954 FAM237AA0A1B0GTK4 181 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 CDKL5O76039 1030 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 TOP1P11387 765 aaKnown RBP12.85□□□□□ -0.35
ATF3-211ENST00000613954 TM4SF1P30408 202 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 TRIM65Q6PJ69 517 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 RALYLQ86SE5 291 aaKnown RBP12.85□□□□□ -0.35
ATF3-211ENST00000613954 SPATA5Q8NB90 893 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 APPBP2Q92624 585 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 OSBP2Q969R2 916 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 PIH1D3Q9NQM4 214 aaKnown RBP12.85□□□□□ -0.35
ATF3-211ENST00000613954 HPSEQ9Y251 543 aa12.85□□□□□ -0.35
ATF3-211ENST00000613954 M0R2C6 588 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 TADA3O75528 432 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 TAF1P21675 1872 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 RASGRF1Q13972 1273 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 WASHC4Q2M389 1173 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 OTUD7BQ6GQQ9 843 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 PRR5LQ6MZQ0 368 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 MB21D2Q8IYB1 491 aaPredicted RBP12.84□□□□□ -0.35
ATF3-211ENST00000613954 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
ATF3-211ENST00000613954 ANKRD2Q9GZV1 360 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 MYH7P12883 1935 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 PPFIA3O75145 1194 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 URI1O94763 535 aaPredicted RBP12.84□□□□□ -0.35
ATF3-211ENST00000613954 BCAMP50895 628 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 ST5P78524 1137 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 AKT1S1Q96B36 256 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 HSD3B7Q9H2F3 369 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 TFCP2L1Q9NZI6 479 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
ATF3-211ENST00000613954 HPS5Q9UPZ3 1129 aa12.84□□□□□ -0.35
ATF3-211ENST00000613954 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 SERPINB2P05120 415 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 ATP1A3P13637 1013 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 ADD2P35612 726 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 PLA2G4AP47712 749 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 UBE3CQ15386 1083 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 TTLL5Q6EMB2 1281 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 CPLX2Q6PUV4 134 aaKnown RBP12.83□□□□□ -0.36
ATF3-211ENST00000613954 REXO1L1PQ8IX06 675 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
ATF3-211ENST00000613954 GNL3LQ9NVN8 582 aaKnown RBP12.83□□□□□ -0.36
ATF3-211ENST00000613954 RGS17Q9UGC6 210 aaPredicted RBP12.83□□□□□ -0.36
ATF3-211ENST00000613954 MROH7-TTC4A0A0A0MT08 1334 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 ZNF804BA4D1E1 1349 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 KIF28PB7ZC32 967 aa12.83□□□□□ -0.36
ATF3-211ENST00000613954 IDH1O75874 414 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms