RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 POTEEQ6S8J3 1075 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 LUZP1Q86V48 1076 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 KIRREL3Q8IZU9 778 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 ZKSCAN4Q969J2 545 aaPredicted RBP5.34□□□□□ -1.55
HDDC2-208ENST00000609021 GINM1Q9NU53 330 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 FAM53CQ9NYF3 392 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 CHPF2Q9P2E5 772 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 MAFFQ9ULX9 164 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 ARIH1Q9Y4X5 557 aaPredicted RBP5.34□□□□□ -1.55
HDDC2-208ENST00000609021 TOPAZ1Q8N9V7 1692 aa5.34□□□□□ -1.55
HDDC2-208ENST00000609021 ANKRD50Q9ULJ7 1429 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 YEATS2Q9ULM3 1422 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 EVC2Q86UK5 1308 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 GOLGA6L7A0A1B0GV03 622 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 FESP07332 822 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 CLCN6P51797 869 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 CNGA3Q16281 694 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 GALNT17Q6IS24 598 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 GORASP1Q9BQQ3 440 aa5.34□□□□□ -1.56
HDDC2-208ENST00000609021 USP54Q70EL1 1684 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 BRD4O60885 1362 aaPredicted RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 HOXA2O43364 376 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 NDUFB5O43674 189 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 HOXA10P31260 410 aaPredicted RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 GCLCP48506 637 aaPredicted RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 IGBP1P78318 339 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 PDE4BQ07343 736 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 WDR43Q15061 677 aaKnown RBP eCLIP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 GKAP1Q5VSY0 366 aaPredicted RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 LRRC49Q8IUZ0 686 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 CTAGE1Q96RT6 745 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 DISC1Q9NRI5 854 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 MKL2Q9ULH7 1088 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 CLEC11AQ9Y240 323 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 LUC7L2Q9Y383 392 aaKnown RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 FHOD1Q9Y613 1164 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 ARHGAP31Q2M1Z3 1444 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 XIRP1Q702N8 1843 aaKnown RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 DIAPH1O60610 1272 aaKnown RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 STAM2O75886 525 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 CSPG5O95196 566 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 PIK3CAP42336 1068 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 CSE1LP55060 971 aaKnown RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 MRPL28Q13084 256 aaKnown RBP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 PDE3BQ13370 1112 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
HDDC2-208ENST00000609021 NBPF14Q5TI25 921 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 CHRDL2Q6WN34 429 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 TNIP2Q8NFZ5 429 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 SPIRE2Q8WWL2 714 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 SFMBT1Q9UHJ3 866 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 CEP131Q9UPN4 1083 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 ZMYM3Q14202 1370 aa5.33□□□□□ -1.56
HDDC2-208ENST00000609021 TMEM110-MUSTN1A8MSY1 372 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 H7C1W4 665 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 MTA2O94776 668 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 PKD2Q13563 968 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 SNCBQ16143 134 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 PKN1Q16512 942 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 CLUAP1Q96AJ1 413 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 GPATCH3Q96I76 525 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 SPAG5Q96R06 1193 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 PDGFDQ9GZP0 370 aaPredicted RBP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 GBP3Q9H0R5 595 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 AS3MTQ9HBK9 375 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 MTUS1Q9ULD2 1270 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 BZW2Q9Y6E2 419 aaKnown RBP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 EVI5O60447 810 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 TGFB3P10600 412 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 GNAT1P11488 350 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 SAFB2Q14151 953 aaKnown RBP eCLIP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 TOMM20Q15388 145 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 ERCC6LQ2NKX8 1250 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 MUM1Q2TAK8 710 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 PLEKHO1Q53GL0 409 aaPredicted RBP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 C10orf62Q5T681 223 aaPredicted RBP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 CLEC17AQ6ZS10 378 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 ANKRD13DQ6ZTN6 518 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 SMYD1Q8NB12 490 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 C2orf49Q9BVC5 232 aaPredicted RBP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 ZNF777Q9ULD5 760 aaPredicted RBP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 MYOM2P54296 1465 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 RALGAPBQ86X10 1494 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 CD109Q6YHK3 1445 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 PLEKHG3A1L390 1219 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 SRGAP3O43295 1099 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 TMCC1O94876 653 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 HNRNPCP07910 306 aaKnown RBP eCLIP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 HSPA8P11142 646 aaKnown RBP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 CD53P19397 219 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 ACTN3Q08043 901 aaPredicted RBP5.32□□□□□ -1.56
HDDC2-208ENST00000609021 CBX3Q13185 183 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 KCTD2Q14681 263 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 LONRF1Q17RB8 773 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 FAM117BQ6P1L5 589 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 BICDL1Q6ZP65 573 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 MSANTD4Q8NCY6 345 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 ERP27Q96DN0 273 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 SENP7Q9BQF6 1050 aa5.32□□□□□ -1.56
HDDC2-208ENST00000609021 KRT82Q9NSB4 513 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms