RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 CUL5Q93034 780 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 ZKSCAN4Q969J2 545 aaPredicted RBP7.79□□□□□ -1.16
SNX5-218ENST00000606570 INTS4Q96HW7 963 aaKnown RBP7.79□□□□□ -1.16
SNX5-218ENST00000606570 MUC3BQ9H195 1237 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 PSD3Q9NYI0 1048 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 EMILIN1Q9Y6C2 1016 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 EZRP15311 586 aaKnown RBP7.79□□□□□ -1.16
SNX5-218ENST00000606570 SLC4A8Q2Y0W8 1093 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 CCDC150Q8NCX0 1101 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 SREK1Q8WXA9 508 aaKnown RBP7.79□□□□□ -1.16
SNX5-218ENST00000606570 WDR37Q9Y2I8 494 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 ARHGEF5Q12774 1597 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 PABPN1LA6NDY0 278 aaKnown RBP7.79□□□□□ -1.16
SNX5-218ENST00000606570 PARP1P09874 1014 aaKnown RBP7.79□□□□□ -1.16
SNX5-218ENST00000606570 INPP5BP32019 993 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 TUFMP49411 452 aaKnown RBP7.79□□□□□ -1.16
SNX5-218ENST00000606570 KRT85P78386 507 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 ITIH3Q06033 890 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 DDB1Q16531 1140 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 CFAP58Q5T655 872 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 HDAC7Q8WUI4 952 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 LMBR1Q8WVP7 490 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 MIS18AQ9NYP9 233 aa7.79□□□□□ -1.16
SNX5-218ENST00000606570 PAIP2BQ9ULR5 123 aaKnown RBP7.79□□□□□ -1.16
SNX5-218ENST00000606570 MAST1Q9Y2H9 1570 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 HOXD10P28358 340 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 POLR2FP61218 127 aaKnown RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 SMC1AQ14683 1233 aaKnown RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 CAPRIN2Q6IMN6 1127 aaKnown RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 KANK3Q6NY19 840 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 LUZP1Q86V48 1076 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 JAKMIP2Q96AA8 810 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 ERO1AQ96HE7 468 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 IFT122Q9HBG6 1241 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 CD109Q6YHK3 1445 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 TRAPPC8Q9Y2L5 1435 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 ABCC4O15439 1325 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 SURF6O75683 361 aaKnown RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 USP5P45974 858 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 PAPOLAP51003 745 aaKnown RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 LRMPQ12912 555 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 RRS1Q15050 365 aaKnown RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 CCDC121Q6ZUS5 278 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 MCM10Q7L590 875 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 ERMNQ8TAM6 284 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 CEP295NLQ96MC4 621 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 OSBPL9Q96SU4 736 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.78□□□□□ -1.16
SNX5-218ENST00000606570 RTEL1Q9NZ71 1219 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 LAMC1P11047 1609 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 TBCAO75347 108 aaKnown RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 CASTP20810 708 aaKnown RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 SYT1P21579 422 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 ARPC4P59998 168 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 CDCA2Q69YH5 1023 aaPredicted RBP7.78□□□□□ -1.16
SNX5-218ENST00000606570 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.78□□□□□ -1.16
SNX5-218ENST00000606570 DYDC1Q8WWB3 177 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 COG3Q96JB2 828 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 ZCWPW1Q9H0M4 648 aa7.78□□□□□ -1.16
SNX5-218ENST00000606570 AHCYL1O43865 530 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 HSPA1AP0DMV8 641 aaKnown RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 HSPA1BP0DMV9 641 aaKnown RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 NEK2P51955 445 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 PTPN14Q15678 1187 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 CWF19L1Q69YN2 538 aaKnown RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 HOMER1Q86YM7 354 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 GBP7Q8N8V2 638 aaPredicted RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 FAM200AQ8TCP9 573 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 ALDH8A1Q9H2A2 487 aaPredicted RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 CENPHQ9H3R5 247 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 AATFQ9NY61 560 aaKnown RBP eCLIP7.77□□□□□ -1.17
SNX5-218ENST00000606570 TSPYL4Q9UJ04 414 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 LIMCH1Q9UPQ0 1083 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 A0A1W2PP64 1363 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 SPTLC2O15270 562 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 ZEB2O60315 1214 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 MTA2O94776 668 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 F13A1P00488 732 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 ZKSCAN1P17029 563 aaPredicted RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 CEBPZQ03701 1054 aaKnown RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 EIF4A2Q14240 407 aaKnown RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 SEPT2Q15019 361 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 SULT6B1Q6IMI4 303 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 RCSD1Q6JBY9 416 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 ALKBH2Q6NS38 261 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 REXO1L1PQ8IX06 675 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 JAKMIP1Q96N16 626 aaKnown RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 ALS2CR12Q96Q35 445 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 MPHOSPH6Q99547 160 aaKnown RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 ZNF304Q9HCX3 659 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 GJA3Q9Y6H8 435 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 ZFXP17010 805 aaPredicted RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 RPL13P26373 211 aaKnown RBP7.77□□□□□ -1.17
SNX5-218ENST00000606570 GJB2P29033 226 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 CLCN6P51797 869 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 BIRC3Q13489 604 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 CUL3Q13618 768 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 PLPP6Q8IY26 295 aa7.77□□□□□ -1.17
SNX5-218ENST00000606570 USP6NLQ92738 828 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms