RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 GLYCTKQ8IVS8 523 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 TOP6BLQ8N6T0 577 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 CITED4Q96RK1 184 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 TUT1Q9H6E5 874 aaKnown RBP7.88□□□□□ -1.15
FOCAD-210ENST00000603844 FAM53CQ9NYF3 392 aa7.88□□□□□ -1.15
FOCAD-210ENST00000603844 MAGI1Q96QZ7 1491 aaPredicted RBP7.87□□□□□ -1.15
FOCAD-210ENST00000603844 LRRC10BA6NIK2 292 aa7.87□□□□□ -1.15
FOCAD-210ENST00000603844 EIF1AYO14602 144 aaKnown RBP7.87□□□□□ -1.15
FOCAD-210ENST00000603844 ARHGAP4P98171 946 aa7.87□□□□□ -1.15
FOCAD-210ENST00000603844 PPP2R3AQ06190 1150 aa7.87□□□□□ -1.15
FOCAD-210ENST00000603844 GRM2Q14416 872 aa7.87□□□□□ -1.15
FOCAD-210ENST00000603844 ISL2Q96A47 359 aa7.87□□□□□ -1.15
FOCAD-210ENST00000603844 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.87□□□□□ -1.15
FOCAD-210ENST00000603844 ITIH2P19823 946 aa7.86□□□□□ -1.15
FOCAD-210ENST00000603844 FAM214BQ7L5A3 538 aa7.86□□□□□ -1.15
FOCAD-210ENST00000603844 CILP2Q8IUL8 1156 aa7.86□□□□□ -1.15
FOCAD-210ENST00000603844 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.86□□□□□ -1.15
FOCAD-210ENST00000603844 CCDC82Q8N4S0 544 aa7.86□□□□□ -1.15
FOCAD-210ENST00000603844 KCNB2Q92953 911 aa7.86□□□□□ -1.15
FOCAD-210ENST00000603844 HEXIM2Q96MH2 286 aaKnown RBP7.86□□□□□ -1.15
FOCAD-210ENST00000603844 SSU72Q9NP77 194 aaKnown RBP7.86□□□□□ -1.15
FOCAD-210ENST00000603844 TMEM39AQ9NV64 488 aa7.86□□□□□ -1.15
FOCAD-210ENST00000603844 ZNF503-AS2A6NEH8 195 aa7.85□□□□□ -1.15
FOCAD-210ENST00000603844 RANGAP1P46060 587 aaPredicted RBP7.85□□□□□ -1.15
FOCAD-210ENST00000603844 KCNMB1Q16558 191 aa7.85□□□□□ -1.15
FOCAD-210ENST00000603844 ZC3H12AQ5D1E8 599 aaKnown RBP7.85□□□□□ -1.15
FOCAD-210ENST00000603844 RNF214Q8ND24 703 aa7.85□□□□□ -1.15
FOCAD-210ENST00000603844 ASB11Q8WXH4 323 aa7.85□□□□□ -1.15
FOCAD-210ENST00000603844 PRDM7Q9NQW5 492 aa7.85□□□□□ -1.15
FOCAD-210ENST00000603844 SYNJ2O15056 1496 aa7.85□□□□□ -1.15
FOCAD-210ENST00000603844 CLIP1P30622 1438 aa7.85□□□□□ -1.15
FOCAD-210ENST00000603844 CTTNBP2Q8WZ74 1663 aa7.84□□□□□ -1.15
FOCAD-210ENST00000603844 IGF2BP3O00425 579 aaKnown RBP eCLIP7.84□□□□□ -1.15
FOCAD-210ENST00000603844 IGHA2P01877 340 aa7.84□□□□□ -1.15
FOCAD-210ENST00000603844 SERPINB4P48594 390 aa7.84□□□□□ -1.15
FOCAD-210ENST00000603844 ERVK-24P63145 666 aa7.84□□□□□ -1.15
FOCAD-210ENST00000603844 DTHD1Q6ZMT9 781 aa7.84□□□□□ -1.15
FOCAD-210ENST00000603844 GPN3Q9UHW5 284 aaPredicted RBP7.84□□□□□ -1.15
FOCAD-210ENST00000603844 GRIN2AQ12879 1464 aa7.83□□□□□ -1.16
FOCAD-210ENST00000603844 GPR182O15218 404 aa7.83□□□□□ -1.16
FOCAD-210ENST00000603844 ZP2Q05996 745 aa7.83□□□□□ -1.16
FOCAD-210ENST00000603844 IKZF1Q13422 519 aa7.83□□□□□ -1.16
FOCAD-210ENST00000603844 MLANAQ16655 118 aa7.83□□□□□ -1.16
FOCAD-210ENST00000603844 B4GALNT3Q6L9W6 998 aa7.83□□□□□ -1.16
FOCAD-210ENST00000603844 NIF3L1Q9GZT8 377 aa7.83□□□□□ -1.16
FOCAD-210ENST00000603844 GTF2IRD1Q9UHL9 959 aa7.83□□□□□ -1.16
FOCAD-210ENST00000603844 FCGRTP55899 365 aa7.82□□□□□ -1.16
FOCAD-210ENST00000603844 SULF2Q8IWU5 870 aa7.82□□□□□ -1.16
FOCAD-210ENST00000603844 SPACA3Q8IXA5 215 aa7.82□□□□□ -1.16
FOCAD-210ENST00000603844 STK35Q8TDR2 534 aa7.82□□□□□ -1.16
FOCAD-210ENST00000603844 EPS8L3Q8TE67 593 aaKnown RBP7.82□□□□□ -1.16
FOCAD-210ENST00000603844 TOX2Q96NM4 488 aa7.82□□□□□ -1.16
FOCAD-210ENST00000603844 CTNND2Q9UQB3 1225 aa7.82□□□□□ -1.16
FOCAD-210ENST00000603844 KRTAP9-7A8MTY7 169 aa7.81□□□□□ -1.16
FOCAD-210ENST00000603844 XRCC5P13010 732 aaKnown RBP7.81□□□□□ -1.16
FOCAD-210ENST00000603844 ARNTP27540 789 aa7.81□□□□□ -1.16
FOCAD-210ENST00000603844 RAP1GAPP47736 663 aa7.81□□□□□ -1.16
FOCAD-210ENST00000603844 CSRNP1Q96S65 589 aa7.81□□□□□ -1.16
FOCAD-210ENST00000603844 PPP1R16BQ96T49 567 aa7.81□□□□□ -1.16
FOCAD-210ENST00000603844 PPP4R2Q9NY27 417 aa7.81□□□□□ -1.16
FOCAD-210ENST00000603844 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.8□□□□□ -1.16
FOCAD-210ENST00000603844 TSPAN15O95858 294 aa7.8□□□□□ -1.16
FOCAD-210ENST00000603844 AFMP43652 599 aa7.8□□□□□ -1.16
FOCAD-210ENST00000603844 NKPD1Q17RQ9 610 aa7.8□□□□□ -1.16
FOCAD-210ENST00000603844 KRTAP4-11Q9BYQ6 195 aa7.8□□□□□ -1.16
FOCAD-210ENST00000603844 PRDM10Q9NQV6 1147 aa7.8□□□□□ -1.16
FOCAD-210ENST00000603844 IQGAP2Q13576 1575 aa7.8□□□□□ -1.16
FOCAD-210ENST00000603844 CHD1O14646 1710 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 NME2P22392 152 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 CFPP27918 469 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 MAP1SQ66K74 1059 aaPredicted RBP7.79□□□□□ -1.16
FOCAD-210ENST00000603844 TMC1Q8TDI8 760 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 GPBAR1Q8TDU6 330 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 ALKBH8Q96BT7 664 aaKnown RBP7.79□□□□□ -1.16
FOCAD-210ENST00000603844 LIN37Q96GY3 246 aaPredicted RBP7.79□□□□□ -1.16
FOCAD-210ENST00000603844 EMILIN2Q9BXX0 1053 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 CACNA2D2Q9NY47 1150 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 USTQ9Y2C2 406 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 CEP170Q5SW79 1584 aa7.79□□□□□ -1.16
FOCAD-210ENST00000603844 EFCAB5A4FU69 1503 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 CLCN7P51798 805 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 ZNF252P-AS1Q0IIN9 211 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 C1QL4Q86Z23 238 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 DMRTB1Q96MA1 342 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 NLRP2Q9NX02 1062 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 LMCD1Q9NZU5 365 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 ARHGAP35Q9NRY4 1499 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
FOCAD-210ENST00000603844 ARAP1Q96P48 1450 aa7.77□□□□□ -1.17
FOCAD-210ENST00000603844 NTF4P34130 210 aa7.77□□□□□ -1.17
FOCAD-210ENST00000603844 PPM1JQ5JR12 505 aa7.77□□□□□ -1.17
FOCAD-210ENST00000603844 FYB2Q5VWT5 728 aa7.77□□□□□ -1.17
FOCAD-210ENST00000603844 ZSCAN18Q8TBC5 510 aaPredicted RBP7.77□□□□□ -1.17
FOCAD-210ENST00000603844 KIAA0586Q9BVV6 1533 aa7.77□□□□□ -1.17
FOCAD-210ENST00000603844 NUP160Q12769 1436 aa7.77□□□□□ -1.17
FOCAD-210ENST00000603844 GNAT3A8MTJ3 354 aa7.76□□□□□ -1.17
FOCAD-210ENST00000603844 GLI1P08151 1106 aa7.76□□□□□ -1.17
FOCAD-210ENST00000603844 ACSBG1Q96GR2 724 aa7.76□□□□□ -1.17
FOCAD-210ENST00000603844 BCO2Q9BYV7 579 aa7.76□□□□□ -1.17
FOCAD-210ENST00000603844 VPS8Q8N3P4 1428 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms