RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 AATFQ9NY61 560 aaKnown RBP eCLIP25.98■■□□□ 1.75
PPFIA3-209ENST00000602783 NOP58Q9Y2X3 529 aaKnown RBP25.98■■□□□ 1.75
PPFIA3-209ENST00000602783 DOCK1Q14185 1865 aa25.98■■□□□ 1.75
PPFIA3-209ENST00000602783 CYP2E1P05181 493 aaPredicted RBP25.97■■□□□ 1.75
PPFIA3-209ENST00000602783 FCGRTP55899 365 aa25.97■■□□□ 1.75
PPFIA3-209ENST00000602783 MYO5AQ9Y4I1 1855 aaKnown RBP25.96■■□□□ 1.75
PPFIA3-209ENST00000602783 GRK4P32298 578 aa25.96■■□□□ 1.75
PPFIA3-209ENST00000602783 ZAP70P43403 619 aa25.96■■□□□ 1.75
PPFIA3-209ENST00000602783 MTFR1Q15390 333 aa25.96■■□□□ 1.75
PPFIA3-209ENST00000602783 CEP85Q6P2H3 762 aa25.96■■□□□ 1.75
PPFIA3-209ENST00000602783 ZNF512BQ96KM6 892 aaPredicted RBP25.96■■□□□ 1.75
PPFIA3-209ENST00000602783 CCDC8Q9H0W5 538 aaPredicted RBP25.96■■□□□ 1.75
PPFIA3-209ENST00000602783 COL2A1P02458 1487 aaPredicted RBP25.96■■□□□ 1.75
PPFIA3-209ENST00000602783 CAP2P40123 477 aa25.95■■□□□ 1.74
PPFIA3-209ENST00000602783 PRKCZQ05513 592 aa25.95■■□□□ 1.74
PPFIA3-209ENST00000602783 SPP2Q13103 211 aa25.95■■□□□ 1.74
PPFIA3-209ENST00000602783 SMCR8Q8TEV9 937 aaPredicted RBP25.95■■□□□ 1.74
PPFIA3-209ENST00000602783 DBNLQ9UJU6 430 aaKnown RBP25.95■■□□□ 1.74
PPFIA3-209ENST00000602783 AGTPBP1Q9UPW5 1226 aa25.95■■□□□ 1.74
PPFIA3-209ENST00000602783 PHIPQ8WWQ0 1821 aa25.95■■□□□ 1.74
PPFIA3-209ENST00000602783 MS4A1P11836 297 aa25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 PLCG2P16885 1265 aa25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 PPP4CP60510 307 aa25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 RRP1BQ14684 758 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 ADGRA1Q86SQ6 560 aa25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 TGFBRAP1Q8WUH2 860 aa25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 DHX36Q9H2U1 1008 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 TLR7Q9NYK1 1049 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 PI4KBQ9UBF8 816 aa25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 BIN2Q9UBW5 565 aaPredicted RBP25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 HERC5Q9UII4 1024 aaKnown RBP25.94■■□□□ 1.74
PPFIA3-209ENST00000602783 PTPRFP10586 1907 aa25.93■■□□□ 1.74
PPFIA3-209ENST00000602783 TREML2Q5T2D2 321 aa25.93■■□□□ 1.74
PPFIA3-209ENST00000602783 MAPKAPK5Q8IW41 473 aa25.93■■□□□ 1.74
PPFIA3-209ENST00000602783 ZNF280CQ8ND82 737 aa25.93■■□□□ 1.74
PPFIA3-209ENST00000602783 EAF2Q96CJ1 260 aaPredicted RBP25.93■■□□□ 1.74
PPFIA3-209ENST00000602783 GCC1Q96CN9 775 aa25.93■■□□□ 1.74
PPFIA3-209ENST00000602783 PIH1D3Q9NQM4 214 aaKnown RBP25.93■■□□□ 1.74
PPFIA3-209ENST00000602783 GABRQQ9UN88 632 aa25.93■■□□□ 1.74
PPFIA3-209ENST00000602783 CDK5RAP2Q96SN8 1893 aa25.91■■□□□ 1.74
PPFIA3-209ENST00000602783 USP17L5A8MUK1 530 aa25.91■■□□□ 1.74
PPFIA3-209ENST00000602783 PROCA1Q8NCQ7 364 aaPredicted RBP25.91■■□□□ 1.74
PPFIA3-209ENST00000602783 TBC1D2Q9BYX2 928 aa25.91■■□□□ 1.74
PPFIA3-209ENST00000602783 RCAN3Q9UKA8 241 aa25.91■■□□□ 1.74
PPFIA3-209ENST00000602783 IGSF3O75054 1194 aa25.9■■□□□ 1.74
PPFIA3-209ENST00000602783 HMGCS2P54868 508 aa25.9■■□□□ 1.74
PPFIA3-209ENST00000602783 ANKRD13CQ8N6S4 541 aa25.9■■□□□ 1.74
PPFIA3-209ENST00000602783 PNMA3Q9UL41 463 aa25.9■■□□□ 1.74
PPFIA3-209ENST00000602783 FLT1P17948 1338 aa25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 FOCADQ5VW36 1801 aa25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 TNPO2O14787 897 aaKnown RBP25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 DYNLL1P63167 89 aaKnown RBP25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 UBXN2AP68543 259 aa25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 FOXP4Q8IVH2 680 aaPredicted RBP25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 AS3MTQ9HBK9 375 aa25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 PALD1Q9ULE6 856 aa25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 EXOC6BQ9Y2D4 811 aa25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 COG6Q9Y2V7 657 aa25.89■■□□□ 1.74
PPFIA3-209ENST00000602783 MGAMO43451 1857 aa25.89■■□□□ 1.73
PPFIA3-209ENST00000602783 IDH1O75874 414 aaKnown RBP25.88■■□□□ 1.73
PPFIA3-209ENST00000602783 CCL5P13501 91 aa25.88■■□□□ 1.73
PPFIA3-209ENST00000602783 CYP7A1P22680 504 aa25.88■■□□□ 1.73
PPFIA3-209ENST00000602783 FLT3LGP49771 235 aa25.88■■□□□ 1.73
PPFIA3-209ENST00000602783 SLAIN1Q8ND83 568 aa25.88■■□□□ 1.73
PPFIA3-209ENST00000602783 RNF208Q9H0X6 261 aa25.88■■□□□ 1.73
PPFIA3-209ENST00000602783 ADCY3O60266 1144 aa25.87■■□□□ 1.73
PPFIA3-209ENST00000602783 PABPC4Q13310 644 aaKnown RBP eCLIP25.87■■□□□ 1.734e-8■■■■□ 20.7
PPFIA3-209ENST00000602783 CRACR2BQ8N4Y2 399 aaPredicted RBP25.87■■□□□ 1.73
PPFIA3-209ENST00000602783 NKX2-3Q8TAU0 364 aa25.87■■□□□ 1.73
PPFIA3-209ENST00000602783 SHISA4Q96DD7 197 aa25.87■■□□□ 1.73
PPFIA3-209ENST00000602783 TRIM34Q9BYJ4 488 aa25.87■■□□□ 1.73
PPFIA3-209ENST00000602783 DDX19BQ9UMR2 479 aa25.87■■□□□ 1.73
PPFIA3-209ENST00000602783 NDUFB9Q9Y6M9 179 aa25.87■■□□□ 1.73
PPFIA3-209ENST00000602783 GJB1P08034 283 aa25.86■■□□□ 1.73
PPFIA3-209ENST00000602783 SH3D19Q5HYK7 790 aa25.86■■□□□ 1.73
PPFIA3-209ENST00000602783 ERC1Q8IUD2 1116 aa25.86■■□□□ 1.73
PPFIA3-209ENST00000602783 DNAJC18Q9H819 358 aa25.86■■□□□ 1.73
PPFIA3-209ENST00000602783 SAP30BPQ9UHR5 308 aaKnown RBP25.86■■□□□ 1.73
PPFIA3-209ENST00000602783 ATAD5Q96QE3 1844 aa25.86■■□□□ 1.73
PPFIA3-209ENST00000602783 ASNSP08243 561 aa25.85■■□□□ 1.73
PPFIA3-209ENST00000602783 JAG1P78504 1218 aa25.85■■□□□ 1.73
PPFIA3-209ENST00000602783 FAM110CQ1W6H9 321 aa25.85■■□□□ 1.73
PPFIA3-209ENST00000602783 AACSQ86V21 672 aa25.85■■□□□ 1.73
PPFIA3-209ENST00000602783 METTL16Q86W50 562 aaKnown RBP25.85■■□□□ 1.73
PPFIA3-209ENST00000602783 COA7Q96BR5 231 aa25.85■■□□□ 1.73
PPFIA3-209ENST00000602783 WDR18Q9BV38 432 aa25.85■■□□□ 1.73
PPFIA3-209ENST00000602783 ELNP15502 786 aa25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 GJA8P48165 433 aa25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 GCLCP48506 637 aaPredicted RBP25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 HABP4Q5JVS0 413 aaKnown RBP25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 MAGEB6Q8N7X4 407 aa25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 MIGA1Q8NAN2 632 aa25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 ASCC2Q9H1I8 757 aaPredicted RBP25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 ANTXR1Q9H6X2 564 aa25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 SIPA1L1O43166 1804 aa25.84■■□□□ 1.73
PPFIA3-209ENST00000602783 GDF11O95390 407 aa25.83■■□□□ 1.73
PPFIA3-209ENST00000602783 HLA-DOAP06340 250 aa25.83■■□□□ 1.73
PPFIA3-209ENST00000602783 BACE1P56817 501 aa25.83■■□□□ 1.73
PPFIA3-209ENST00000602783 IRF5Q13568 498 aa25.83■■□□□ 1.73
PPFIA3-209ENST00000602783 MTMR2Q13614 643 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms