RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 CTDSPL2Q05D32 466 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 RPAINQ86UA6 219 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 L2HGDHQ9H9P8 463 aa17.56■□□□□ 0.4
PPFIA3-206ENST00000602655 ZNF609O15014 1411 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 NECTIN1Q15223 517 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 SPATA5Q8NB90 893 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 MRFAP1L1Q96HT8 127 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 DONSONQ9NYP3 566 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 FAN1Q9Y2M0 1017 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 SPATA31A6Q5VVP1 1343 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 H3BQV1 296 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 TXNRD1Q16881 649 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 IFFO2Q5TF58 517 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 PARD6BQ9BYG5 372 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 PLEKHG2Q9H7P9 1386 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 CYP2D7A0A087X1C5 515 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 H3BQF6 201 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 FGAP02671 866 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 CYP7A1P22680 504 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 OTUD7BQ6GQQ9 843 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 RALYLQ86SE5 291 aaKnown RBP17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 LPIN2Q92539 896 aa17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 RPGRQ92834 1020 aaKnown RBP17.55■□□□□ 0.4
PPFIA3-206ENST00000602655 LONRF2Q1L5Z9 754 aa17.54■□□□□ 0.4
PPFIA3-206ENST00000602655 STOX1Q6ZVD7 989 aa17.54■□□□□ 0.4
PPFIA3-206ENST00000602655 IFNKQ9P0W0 207 aa17.54■□□□□ 0.4
PPFIA3-206ENST00000602655 LRCH2Q5VUJ6 765 aa17.54■□□□□ 0.4
PPFIA3-206ENST00000602655 CEP57L1Q8IYX8 460 aa17.54■□□□□ 0.4
PPFIA3-206ENST00000602655 NARFQ9UHQ1 456 aa17.54■□□□□ 0.4
PPFIA3-206ENST00000602655 ABCC12Q96J65 1359 aa17.54■□□□□ 0.4
PPFIA3-206ENST00000602655 EFCAB8A8MWE9 144 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 KINO60870 393 aaKnown RBP17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 EN1Q05925 392 aaPredicted RBP17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 WWC2Q6AWC2 1192 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 CCDC73Q6ZRK6 1079 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 STX1AQ16623 288 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 EIF3JO75822 258 aaKnown RBP17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 PSMA5P28066 241 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 SATB1Q01826 763 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 LRRFIP1Q32MZ4 808 aaKnown RBP17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 CAVIN4Q5BKX8 364 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 MINPP1Q9UNW1 487 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 SLIT2O94813 1529 aa17.53■□□□□ 0.4
PPFIA3-206ENST00000602655 G3V3G9 751 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 JAKMIP3Q5VZ66 844 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 GJB4Q9NTQ9 266 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 NHSL1Q5SYE7 1610 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 BIN1O00499 593 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 ZNF213O14771 459 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 ERLIN2O94905 339 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 DYNLL1P63167 89 aaKnown RBP17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 PPP2R3AQ06190 1150 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 CMTR1Q8N1G2 835 aaKnown RBP17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 PDILTQ8N807 584 aa17.52■□□□□ 0.4
PPFIA3-206ENST00000602655 TADA3O75528 432 aa17.52■□□□□ 0.39
PPFIA3-206ENST00000602655 CIAO1O76071 339 aa17.52■□□□□ 0.39
PPFIA3-206ENST00000602655 PDE6AP16499 860 aa17.52■□□□□ 0.39
PPFIA3-206ENST00000602655 DEFB132Q7Z7B7 95 aa17.52■□□□□ 0.39
PPFIA3-206ENST00000602655 LEO1Q8WVC0 666 aaPredicted RBP17.52■□□□□ 0.39
PPFIA3-206ENST00000602655 B4E1Z4 1266 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 ATP8B1O43520 1251 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 N4BP1O75113 896 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 SERPINB2P05120 415 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 CDC25BP30305 580 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 PTPN21Q16825 1174 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 PUF60Q9UHX1 559 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 MAP3K12Q12852 859 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 NAPBQ9H115 298 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 SLC4A4Q9Y6R1 1079 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 ECM2O94769 699 aaPredicted RBP17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 PDCP20941 246 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 RDXP35241 583 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 GPR161Q8N6U8 529 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 JPH2Q9BR39 696 aaPredicted RBP17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 PDGFDQ9GZP0 370 aaPredicted RBP17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 NAT10Q9H0A0 1025 aaKnown RBP17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 ANO10Q9NW15 660 aa17.51■□□□□ 0.39
PPFIA3-206ENST00000602655 CACNA1FO60840 1977 aa17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 USP8P40818 1118 aa17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 TRDNQ13061 729 aa17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 GBP6Q6ZN66 633 aa17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 TADA2BQ86TJ2 420 aa17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 XPO4Q9C0E2 1151 aaKnown RBP17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 CORO7P57737 925 aa17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 MICU3Q86XE3 530 aa17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 NUP133Q8WUM0 1156 aa17.5■□□□□ 0.39
PPFIA3-206ENST00000602655 E7EWF7 191 aa17.49■□□□□ 0.39
PPFIA3-206ENST00000602655 EVX2Q03828 476 aa17.49■□□□□ 0.39
PPFIA3-206ENST00000602655 GOLGA8FQ08AF8 430 aa17.49■□□□□ 0.39
PPFIA3-206ENST00000602655 GOLGA8DPQ0D2H9 430 aa17.49■□□□□ 0.39
PPFIA3-206ENST00000602655 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
PPFIA3-206ENST00000602655 ZMYM1Q5SVZ6 1142 aa17.49■□□□□ 0.39
PPFIA3-206ENST00000602655 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
PPFIA3-206ENST00000602655 COL16A1Q07092 1604 aaPredicted RBP17.49■□□□□ 0.39
PPFIA3-206ENST00000602655 RXRBP28702 533 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms