RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 RASEFQ8IZ41 740 aa24.3■■□□□ 1.48
PNKP-215ENST00000600910 DYNLL2Q96FJ2 89 aa24.3■■□□□ 1.48
PNKP-215ENST00000600910 ZKSCAN1P17029 563 aaPredicted RBP24.29■■□□□ 1.48
PNKP-215ENST00000600910 MAP1SQ66K74 1059 aaPredicted RBP24.29■■□□□ 1.48
PNKP-215ENST00000600910 USP48Q86UV5 1035 aa24.29■■□□□ 1.48
PNKP-215ENST00000600910 KCNB2Q92953 911 aa24.29■■□□□ 1.48
PNKP-215ENST00000600910 SERPINB13Q9UIV8 391 aa24.29■■□□□ 1.48
PNKP-215ENST00000600910 DLK2Q6UY11 383 aa24.28■■□□□ 1.48
PNKP-215ENST00000600910 CDC37L1Q7L3B6 337 aa24.28■■□□□ 1.48
PNKP-215ENST00000600910 GLIS2Q9BZE0 524 aaPredicted RBP24.28■■□□□ 1.48
PNKP-215ENST00000600910 EHD4Q9H223 541 aa24.28■■□□□ 1.48
PNKP-215ENST00000600910 SNX14Q9Y5W7 946 aa24.28■■□□□ 1.48
PNKP-215ENST00000600910 SLC3A2P08195 630 aaKnown RBP24.28■■□□□ 1.48
PNKP-215ENST00000600910 SLURP2P0DP57 97 aa24.28■■□□□ 1.48
PNKP-215ENST00000600910 RBM25P49756 843 aaKnown RBP24.28■■□□□ 1.48
PNKP-215ENST00000600910 NBPF12Q5TAG4 269 aaPredicted RBP24.28■■□□□ 1.48
PNKP-215ENST00000600910 INCENPQ9NQS7 918 aa24.28■■□□□ 1.48
PNKP-215ENST00000600910 TACC3Q9Y6A5 838 aa24.28■■□□□ 1.48
PNKP-215ENST00000600910 GABPAQ06546 454 aa24.27■■□□□ 1.48
PNKP-215ENST00000600910 TSGA10IPQ3SY00 556 aa24.27■■□□□ 1.48
PNKP-215ENST00000600910 AKNAD1Q5T1N1 836 aa24.27■■□□□ 1.48
PNKP-215ENST00000600910 C16orf86Q6ZW13 317 aa24.27■■□□□ 1.48
PNKP-215ENST00000600910 FOXP4Q8IVH2 680 aaPredicted RBP24.27■■□□□ 1.48
PNKP-215ENST00000600910 CRACR2BQ8N4Y2 399 aaPredicted RBP24.27■■□□□ 1.48
PNKP-215ENST00000600910 STAG1Q8WVM7 1258 aa24.27■■□□□ 1.48
PNKP-215ENST00000600910 TBC1D32Q96NH3 1257 aa24.27■■□□□ 1.48
PNKP-215ENST00000600910 E7EWF7 191 aa24.26■■□□□ 1.47
PNKP-215ENST00000600910 KIF3CO14782 793 aa24.26■■□□□ 1.47
PNKP-215ENST00000600910 MFSD6Q6ZSS7 791 aa24.26■■□□□ 1.47
PNKP-215ENST00000600910 STOX1Q6ZVD7 989 aa24.26■■□□□ 1.47
PNKP-215ENST00000600910 SLC44A5Q8NCS7 719 aa24.26■■□□□ 1.47
PNKP-215ENST00000600910 DNAJC18Q9H819 358 aa24.26■■□□□ 1.47
PNKP-215ENST00000600910 FAM196BA6NMK8 535 aa24.25■■□□□ 1.47
PNKP-215ENST00000600910 PDE4BQ07343 736 aa24.25■■□□□ 1.47
PNKP-215ENST00000600910 METTL16Q86W50 562 aaKnown RBP24.25■■□□□ 1.47
PNKP-215ENST00000600910 TRIM34Q9BYJ4 488 aa24.25■■□□□ 1.47
PNKP-215ENST00000600910 RNF41Q9H4P4 317 aaPredicted RBP24.25■■□□□ 1.47
PNKP-215ENST00000600910 PRDM1O75626 825 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 CDK8P49336 464 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 ANAPC15P60006 121 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 ADCK5Q3MIX3 580 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 MIGA2Q7L4E1 593 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 HERC5Q9UII4 1024 aaKnown RBP24.24■■□□□ 1.47
PNKP-215ENST00000600910 NEDD4P46934 1319 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 FGRP09769 529 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 PCP11498 1178 aaKnown RBP24.24■■□□□ 1.47
PNKP-215ENST00000600910 KRT32Q14532 448 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 SUPT20HL1Q3ZLR7 823 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 ZNF784Q8NCA9 323 aaPredicted RBP24.24■■□□□ 1.47
PNKP-215ENST00000600910 CDCA5Q96FF9 252 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.24■■□□□ 1.47
PNKP-215ENST00000600910 TOMM22Q9NS69 142 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 SWAP70Q9UH65 585 aa24.24■■□□□ 1.47
PNKP-215ENST00000600910 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.24■■□□□ 1.47
PNKP-215ENST00000600910 TBC1D12O60347 775 aa24.23■■□□□ 1.47
PNKP-215ENST00000600910 CHADLQ6NUI6 762 aa24.23■■□□□ 1.47
PNKP-215ENST00000600910 HOOK2Q96ED9 719 aa24.23■■□□□ 1.47
PNKP-215ENST00000600910 MKNK2Q9HBH9 465 aa24.23■■□□□ 1.47
PNKP-215ENST00000600910 ZNF287Q9HBT7 754 aa24.23■■□□□ 1.47
PNKP-215ENST00000600910 SSC5DA1L4H1 1573 aa24.23■■□□□ 1.47
PNKP-215ENST00000600910 SHMT1P34896 483 aa24.22■■□□□ 1.47
PNKP-215ENST00000600910 MAP3K10Q02779 954 aa24.22■■□□□ 1.47
PNKP-215ENST00000600910 RRP12Q5JTH9 1297 aaKnown RBP24.22■■□□□ 1.47
PNKP-215ENST00000600910 TAOK2Q9UL54 1235 aa24.22■■□□□ 1.47
PNKP-215ENST00000600910 TRAF5O00463 557 aa24.21■■□□□ 1.47
PNKP-215ENST00000600910 ORC4O43929 436 aa24.21■■□□□ 1.47
PNKP-215ENST00000600910 TRDNQ13061 729 aa24.21■■□□□ 1.47
PNKP-215ENST00000600910 JAKMIP1Q96N16 626 aaKnown RBP24.21■■□□□ 1.47
PNKP-215ENST00000600910 CNNM2Q9H8M5 875 aa24.21■■□□□ 1.47
PNKP-215ENST00000600910 B4E1Z4 1266 aa24.21■■□□□ 1.47
PNKP-215ENST00000600910 NCOA7Q8NI08 942 aa24.21■■□□□ 1.47
PNKP-215ENST00000600910 IL17RAQ96F46 866 aa24.21■■□□□ 1.47
PNKP-215ENST00000600910 KRT23Q9C075 422 aa24.21■■□□□ 1.47
PNKP-215ENST00000600910 RASA1P20936 1047 aa24.2■■□□□ 1.46
PNKP-215ENST00000600910 DCAF15Q66K64 600 aa24.2■■□□□ 1.46
PNKP-215ENST00000600910 TATDN1Q6P1N9 297 aa24.2■■□□□ 1.46
PNKP-215ENST00000600910 RALYLQ86SE5 291 aaKnown RBP24.2■■□□□ 1.46
PNKP-215ENST00000600910 NKX2-3Q8TAU0 364 aa24.2■■□□□ 1.46
PNKP-215ENST00000600910 NEK1Q96PY6 1258 aa24.2■■□□□ 1.46
PNKP-215ENST00000600910 KIF2CQ99661 725 aa24.2■■□□□ 1.46
PNKP-215ENST00000600910 MYH8P13535 1937 aa24.19■■□□□ 1.46
PNKP-215ENST00000600910 RANBP6O60518 1105 aaKnown RBP24.19■■□□□ 1.46
PNKP-215ENST00000600910 FMR1Q06787 632 aaKnown RBP eCLIP24.19■■□□□ 1.46
PNKP-215ENST00000600910 COL9A3Q14050 684 aaPredicted RBP24.19■■□□□ 1.46
PNKP-215ENST00000600910 ZNF444Q8N0Y2 327 aaPredicted RBP24.19■■□□□ 1.46
PNKP-215ENST00000600910 FZD1Q9UP38 647 aa24.19■■□□□ 1.46
PNKP-215ENST00000600910 CASTP20810 708 aaKnown RBP24.18■■□□□ 1.46
PNKP-215ENST00000600910 PSMA5P28066 241 aa24.18■■□□□ 1.46
PNKP-215ENST00000600910 NF2P35240 595 aa24.18■■□□□ 1.46
PNKP-215ENST00000600910 ESR2Q92731 530 aa24.18■■□□□ 1.46
PNKP-215ENST00000600910 KDM4AO75164 1064 aa24.17■■□□□ 1.46
PNKP-215ENST00000600910 PRKG1Q13976 671 aa24.17■■□□□ 1.46
PNKP-215ENST00000600910 MB21D2Q8IYB1 491 aaPredicted RBP24.17■■□□□ 1.46
PNKP-215ENST00000600910 ZNF341Q9BYN7 854 aa24.17■■□□□ 1.46
PNKP-215ENST00000600910 ITGBL1O95965 494 aaPredicted RBP24.17■■□□□ 1.46
PNKP-215ENST00000600910 RRP1BQ14684 758 aaKnown RBP24.17■■□□□ 1.46
PNKP-215ENST00000600910 CERKLQ49MI3 558 aaPredicted RBP24.17■■□□□ 1.46
PNKP-215ENST00000600910 FAM47AQ5JRC9 791 aa24.17■■□□□ 1.46
PNKP-215ENST00000600910 TM6SF1Q9BZW5 370 aa24.17■■□□□ 1.46
PNKP-215ENST00000600910 ZSWIM5Q9P217 1185 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms