RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 EYSQ5T1H1 3165 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 PLXNB2O15031 1838 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 DNAH12Q6ZR08 3092 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 EYA2O00167 538 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 HMGCRP04035 888 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 RLBP1P12271 317 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 PRDX5P30044 214 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 FAM110CQ1W6H9 321 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 ITPRIPQ8IWB1 547 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 ZFPM1Q8IX07 1006 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 TDHQ8IZJ6 230 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 ANKRD13CQ8N6S4 541 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 SIL1Q9H173 461 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 USP40Q9NVE5 1235 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 AGTPBP1Q9UPW5 1226 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 TNNQ9UQP3 1299 aa11.75□□□□□ -0.53
LINC00649-210ENST00000599421 SIPA1L1O43166 1804 aa11.74□□□□□ -0.53
LINC00649-210ENST00000599421 LDHBP07195 334 aaKnown RBP11.74□□□□□ -0.53
LINC00649-210ENST00000599421 SLC5A1P13866 664 aa11.74□□□□□ -0.53
LINC00649-210ENST00000599421 MAGEA10P43363 369 aaPredicted RBP11.74□□□□□ -0.53
LINC00649-210ENST00000599421 MAP3K10Q02779 954 aa11.74□□□□□ -0.53
LINC00649-210ENST00000599421 B4GALNT3Q6L9W6 998 aa11.74□□□□□ -0.53
LINC00649-210ENST00000599421 LPIN2Q92539 896 aa11.74□□□□□ -0.53
LINC00649-210ENST00000599421 IDI2Q9BXS1 227 aa11.74□□□□□ -0.53
LINC00649-210ENST00000599421 PNMA3Q9UL41 463 aa11.74□□□□□ -0.53
LINC00649-210ENST00000599421 RFX7Q2KHR2 1363 aa11.74□□□□□ -0.53
LINC00649-210ENST00000599421 SPTBN5Q9NRC6 3674 aaKnown RBP11.74□□□□□ -0.53
LINC00649-210ENST00000599421 CDH23Q9H251 3354 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 TRIM75PA6NK02 468 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
LINC00649-210ENST00000599421 ENTPD3O75355 529 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 SYN1P17600 705 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 RGS3P49796 1198 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 MAST2Q6P0Q8 1798 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 SH3BP5LQ7L8J4 393 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 RPTORQ8N122 1335 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 COL25A1Q9BXS0 654 aaPredicted RBP11.73□□□□□ -0.53
LINC00649-210ENST00000599421 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 HMX1Q9NP08 348 aaPredicted RBP11.73□□□□□ -0.53
LINC00649-210ENST00000599421 SALL1Q9NSC2 1324 aa11.73□□□□□ -0.53
LINC00649-210ENST00000599421 PA2G4Q9UQ80 394 aaKnown RBP11.73□□□□□ -0.53
LINC00649-210ENST00000599421 LRRFIP2Q9Y608 721 aaKnown RBP11.73□□□□□ -0.53
LINC00649-210ENST00000599421 SLURP2P0DP57 97 aa11.72□□□□□ -0.53
LINC00649-210ENST00000599421 ADORA1P30542 326 aa11.72□□□□□ -0.53
LINC00649-210ENST00000599421 PHKA1P46020 1223 aa11.72□□□□□ -0.53
LINC00649-210ENST00000599421 ATP2B3Q16720 1220 aa11.72□□□□□ -0.53
LINC00649-210ENST00000599421 TREML2Q5T2D2 321 aa11.72□□□□□ -0.53
LINC00649-210ENST00000599421 ZSCAN29Q8IWY8 852 aaPredicted RBP11.72□□□□□ -0.53
LINC00649-210ENST00000599421 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
LINC00649-210ENST00000599421 OGDHLQ9ULD0 1010 aa11.72□□□□□ -0.53
LINC00649-210ENST00000599421 NCOR1O75376 2440 aa11.72□□□□□ -0.53
LINC00649-210ENST00000599421 FOCADQ5VW36 1801 aa11.72□□□□□ -0.53
LINC00649-210ENST00000599421 GAKO14976 1311 aa11.71□□□□□ -0.53
LINC00649-210ENST00000599421 DDTLA6NHG4 134 aaPredicted RBP11.71□□□□□ -0.53
LINC00649-210ENST00000599421 GCLCP48506 637 aaPredicted RBP11.71□□□□□ -0.53
LINC00649-210ENST00000599421 TRIM32Q13049 653 aa11.71□□□□□ -0.53
LINC00649-210ENST00000599421 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00649-210ENST00000599421 PROCA1Q8NCQ7 364 aaPredicted RBP11.71□□□□□ -0.53
LINC00649-210ENST00000599421 GNL3LQ9NVN8 582 aaKnown RBP11.71□□□□□ -0.53
LINC00649-210ENST00000599421 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.71□□□□□ -0.53
LINC00649-210ENST00000599421 GJD2Q9UKL4 321 aa11.71□□□□□ -0.53
LINC00649-210ENST00000599421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.71□□□□□ -0.53
LINC00649-210ENST00000599421 FRMPD3Q5JV73 1810 aa11.7□□□□□ -0.54
LINC00649-210ENST00000599421 PFASO15067 1338 aa11.7□□□□□ -0.54
LINC00649-210ENST00000599421 SEMA3EO15041 775 aa11.7□□□□□ -0.54
LINC00649-210ENST00000599421 UBTFL1P0CB47 393 aaPredicted RBP11.7□□□□□ -0.54
LINC00649-210ENST00000599421 CCDC84Q86UT8 332 aaPredicted RBP11.7□□□□□ -0.54
LINC00649-210ENST00000599421 MEIS3Q99687 375 aa11.7□□□□□ -0.54
LINC00649-210ENST00000599421 DDX4Q9NQI0 724 aaKnown RBP11.7□□□□□ -0.54
LINC00649-210ENST00000599421 DENND2AQ9ULE3 1009 aa11.7□□□□□ -0.54
LINC00649-210ENST00000599421 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
LINC00649-210ENST00000599421 COL2A1P02458 1487 aaPredicted RBP11.7□□□□□ -0.54
LINC00649-210ENST00000599421 ZBTB22O15209 634 aa11.69□□□□□ -0.54
LINC00649-210ENST00000599421 TBC1D12O60347 775 aa11.69□□□□□ -0.54
LINC00649-210ENST00000599421 CIAO1O76071 339 aa11.69□□□□□ -0.54
LINC00649-210ENST00000599421 PABPC4Q13310 644 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00649-210ENST00000599421 MAP3K21Q5TCX8 1036 aa11.69□□□□□ -0.54
LINC00649-210ENST00000599421 ZGPATQ8N5A5 531 aaKnown RBP11.69□□□□□ -0.54
LINC00649-210ENST00000599421 TRIB2Q92519 343 aa11.69□□□□□ -0.54
LINC00649-210ENST00000599421 MYO9BQ13459 2157 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 COL6A1P12109 1028 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 SPP2Q13103 211 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 PICALMQ13492 652 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 RASGRF1Q13972 1273 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 FAM109BQ6ICB4 259 aaPredicted RBP11.68□□□□□ -0.54
LINC00649-210ENST00000599421 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
LINC00649-210ENST00000599421 GUCD1Q96NT3 240 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 OSBPL5Q9H0X9 879 aaPredicted RBP11.68□□□□□ -0.54
LINC00649-210ENST00000599421 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
LINC00649-210ENST00000599421 RWDD1Q9H446 243 aaPredicted RBP11.68□□□□□ -0.54
LINC00649-210ENST00000599421 ZBTB40Q9NUA8 1239 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 MORF4L1Q9UBU8 362 aa11.68□□□□□ -0.54
LINC00649-210ENST00000599421 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
LINC00649-210ENST00000599421 XRCC5P13010 732 aaKnown RBP11.67□□□□□ -0.54
LINC00649-210ENST00000599421 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
LINC00649-210ENST00000599421 BTDP43251 543 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms