RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 PROCA1Q8NCQ7 364 aaPredicted RBP17.93■□□□□ 0.46
EBI3-202ENST00000599339 SSH3Q8TE77 659 aa17.93■□□□□ 0.46
EBI3-202ENST00000599339 FPGT-TNNI3KV9GXZ4 949 aa17.93■□□□□ 0.46
EBI3-202ENST00000599339 PTPRFP10586 1907 aa17.93■□□□□ 0.46
EBI3-202ENST00000599339 SURF6O75683 361 aaKnown RBP17.92■□□□□ 0.46
EBI3-202ENST00000599339 ATP8B2P98198 1209 aa17.92■□□□□ 0.46
EBI3-202ENST00000599339 PABPC4Q13310 644 aaKnown RBP eCLIP17.92■□□□□ 0.46
EBI3-202ENST00000599339 DHX36Q9H2U1 1008 aaKnown RBP17.92■□□□□ 0.46
EBI3-202ENST00000599339 PHIPQ8WWQ0 1821 aa17.92■□□□□ 0.46
EBI3-202ENST00000599339 MGAMO43451 1857 aa17.92■□□□□ 0.46
EBI3-202ENST00000599339 FAM196BA6NMK8 535 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 TNPO2O14787 897 aaKnown RBP17.91■□□□□ 0.46
EBI3-202ENST00000599339 GJB1P08034 283 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 CCL5P13501 91 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 CAP2P40123 477 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
EBI3-202ENST00000599339 SPP2Q13103 211 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
EBI3-202ENST00000599339 ZNF280CQ8ND82 737 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 DBNDD2Q9BQY9 259 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 RNF208Q9H0X6 261 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 AS3MTQ9HBK9 375 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 SNRKQ9NRH2 765 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 AATFQ9NY61 560 aaKnown RBP eCLIP17.91■□□□□ 0.46
EBI3-202ENST00000599339 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.91■□□□□ 0.46
EBI3-202ENST00000599339 PI4KBQ9UBF8 816 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 MAST2Q6P0Q8 1798 aa17.91■□□□□ 0.46
EBI3-202ENST00000599339 USP17L5A8MUK1 530 aa17.9■□□□□ 0.46
EBI3-202ENST00000599339 GJA8P48165 433 aa17.9■□□□□ 0.46
EBI3-202ENST00000599339 FAM110CQ1W6H9 321 aa17.9■□□□□ 0.46
EBI3-202ENST00000599339 ITPRIPQ8IWB1 547 aa17.9■□□□□ 0.46
EBI3-202ENST00000599339 SH3RF3Q8TEJ3 882 aaPredicted RBP17.9■□□□□ 0.46
EBI3-202ENST00000599339 COA7Q96BR5 231 aa17.9■□□□□ 0.46
EBI3-202ENST00000599339 ZNF512BQ96KM6 892 aaPredicted RBP17.9■□□□□ 0.46
EBI3-202ENST00000599339 TRIM34Q9BYJ4 488 aa17.9■□□□□ 0.46
EBI3-202ENST00000599339 ADCY3O60266 1144 aa17.89■□□□□ 0.45
EBI3-202ENST00000599339 GCLCP48506 637 aaPredicted RBP17.89■□□□□ 0.45
EBI3-202ENST00000599339 FLT3LGP49771 235 aa17.89■□□□□ 0.45
EBI3-202ENST00000599339 ANKRD13CQ8N6S4 541 aa17.89■□□□□ 0.45
EBI3-202ENST00000599339 PXYLP1Q8TE99 480 aa17.89■□□□□ 0.45
EBI3-202ENST00000599339 SHISA4Q96DD7 197 aa17.89■□□□□ 0.45
EBI3-202ENST00000599339 GABRQQ9UN88 632 aa17.89■□□□□ 0.45
EBI3-202ENST00000599339 CEP290O15078 2479 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 CAPN2P17655 700 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 HMGCS2P54868 508 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 PPP4CP60510 307 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 IRF5Q13568 498 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 TREML2Q5T2D2 321 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 HTATIP2Q9BUP3 242 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 C1orf115Q9H7X2 142 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 NOP58Q9Y2X3 529 aaKnown RBP17.88■□□□□ 0.45
EBI3-202ENST00000599339 ATAD5Q96QE3 1844 aa17.88■□□□□ 0.45
EBI3-202ENST00000599339 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
EBI3-202ENST00000599339 ASNSP08243 561 aa17.87■□□□□ 0.45
EBI3-202ENST00000599339 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
EBI3-202ENST00000599339 CRACR2BQ8N4Y2 399 aaPredicted RBP17.87■□□□□ 0.45
EBI3-202ENST00000599339 TGFBRAP1Q8WUH2 860 aa17.87■□□□□ 0.45
EBI3-202ENST00000599339 DPF3Q92784 378 aa17.87■□□□□ 0.45
EBI3-202ENST00000599339 LOC285556D6RIA3 1793 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 HLA-DOAP06340 250 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 SH3D19Q5HYK7 790 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 CERS3Q8IU89 383 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 MAPKAPK5Q8IW41 473 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 U2AF1L4Q8WU68 220 aaKnown RBP17.86■□□□□ 0.45
EBI3-202ENST00000599339 WDR18Q9BV38 432 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 GINM1Q9NU53 330 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 TMOD4Q9NZQ9 345 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 FLT1P17948 1338 aa17.86■□□□□ 0.45
EBI3-202ENST00000599339 H0YGN5 161 aa17.85■□□□□ 0.45
EBI3-202ENST00000599339 ZBTB7BO15156 539 aaPredicted RBP17.85■□□□□ 0.45
EBI3-202ENST00000599339 INHAP05111 366 aa17.85■□□□□ 0.45
EBI3-202ENST00000599339 ELNP15502 786 aa17.85■□□□□ 0.45
EBI3-202ENST00000599339 ZAP70P43403 619 aa17.85■□□□□ 0.45
EBI3-202ENST00000599339 UNC93B1Q9H1C4 597 aa17.85■□□□□ 0.45
EBI3-202ENST00000599339 DBNLQ9UJU6 430 aaKnown RBP17.85■□□□□ 0.45
EBI3-202ENST00000599339 TAOK2Q9UL54 1235 aa17.85■□□□□ 0.45
EBI3-202ENST00000599339 FARP2O94887 1054 aaPredicted RBP17.84■□□□□ 0.45
EBI3-202ENST00000599339 SGPL1O95470 568 aa17.84■□□□□ 0.45
EBI3-202ENST00000599339 CYP7A1P22680 504 aa17.84■□□□□ 0.45
EBI3-202ENST00000599339 BACE1P56817 501 aa17.84■□□□□ 0.45
EBI3-202ENST00000599339 IRX3P78415 501 aaPredicted RBP17.84■□□□□ 0.45
EBI3-202ENST00000599339 RRP1BQ14684 758 aaKnown RBP17.84■□□□□ 0.45
EBI3-202ENST00000599339 TMED8Q6PL24 325 aaPredicted RBP17.84■□□□□ 0.45
EBI3-202ENST00000599339 ADGRA1Q86SQ6 560 aa17.84■□□□□ 0.45
EBI3-202ENST00000599339 ERC1Q8IUD2 1116 aa17.84■□□□□ 0.45
EBI3-202ENST00000599339 CCDC8Q9H0W5 538 aaPredicted RBP17.84■□□□□ 0.45
EBI3-202ENST00000599339 ASCC2Q9H1I8 757 aaPredicted RBP17.84■□□□□ 0.45
EBI3-202ENST00000599339 PIH1D3Q9NQM4 214 aaKnown RBP17.84■□□□□ 0.45
EBI3-202ENST00000599339 COLQQ9Y215 455 aaPredicted RBP17.84■□□□□ 0.45
EBI3-202ENST00000599339 C19orf81C9J6K1 198 aa17.83■□□□□ 0.44
EBI3-202ENST00000599339 IDH1O75874 414 aaKnown RBP17.83■□□□□ 0.44
EBI3-202ENST00000599339 MTMR2Q13614 643 aa17.83■□□□□ 0.44
EBI3-202ENST00000599339 METTL16Q86W50 562 aaKnown RBP17.83■□□□□ 0.44
EBI3-202ENST00000599339 PALD1Q9ULE6 856 aa17.83■□□□□ 0.44
EBI3-202ENST00000599339 NR2E3Q9Y5X4 410 aa17.83■□□□□ 0.44
EBI3-202ENST00000599339 FOCADQ5VW36 1801 aa17.82■□□□□ 0.44
EBI3-202ENST00000599339 USP17L10C9JJH3 530 aa17.82■□□□□ 0.44
EBI3-202ENST00000599339 RLBP1P12271 317 aa17.82■□□□□ 0.44
EBI3-202ENST00000599339 CEP85Q6P2H3 762 aa17.82■□□□□ 0.44
EBI3-202ENST00000599339 UBE2Q1Q7Z7E8 422 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms