RNA–Protein interactions for RNA: ENST00000597687.1

SH2D3A-207, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 859 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-207ENST00000597687 TEX11Q8IYF3 940 aa18.02■□□□□ 0.48
SH2D3A-207ENST00000597687 ANKRD13CQ8N6S4 541 aa18.02■□□□□ 0.48
SH2D3A-207ENST00000597687 HERC5Q9UII4 1024 aaKnown RBP18.02■□□□□ 0.48
SH2D3A-207ENST00000597687 PHIPQ8WWQ0 1821 aa18.02■□□□□ 0.47
SH2D3A-207ENST00000597687 LOC285556D6RIA3 1793 aa18.02■□□□□ 0.47
SH2D3A-207ENST00000597687 DDTLA6NHG4 134 aaPredicted RBP18.01■□□□□ 0.47
SH2D3A-207ENST00000597687 IRX3P78415 501 aaPredicted RBP18.01■□□□□ 0.47
SH2D3A-207ENST00000597687 CCAR1Q8IX12 1150 aaKnown RBP18.01■□□□□ 0.47
SH2D3A-207ENST00000597687 ZNF280CQ8ND82 737 aa18.01■□□□□ 0.47
SH2D3A-207ENST00000597687 UNC93B1Q9H1C4 597 aa18.01■□□□□ 0.47
SH2D3A-207ENST00000597687 TMOD4Q9NZQ9 345 aa18.01■□□□□ 0.47
SH2D3A-207ENST00000597687 SGPL1O95470 568 aa18■□□□□ 0.47
SH2D3A-207ENST00000597687 MAP3K10Q02779 954 aa18■□□□□ 0.47
SH2D3A-207ENST00000597687 MTX1Q13505 466 aa18■□□□□ 0.47
SH2D3A-207ENST00000597687 CCDC158Q5M9N0 1113 aa18■□□□□ 0.47
SH2D3A-207ENST00000597687 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
SH2D3A-207ENST00000597687 CRACR2BQ8N4Y2 399 aaPredicted RBP18■□□□□ 0.47
SH2D3A-207ENST00000597687 DHX36Q9H2U1 1008 aaKnown RBP18■□□□□ 0.47
SH2D3A-207ENST00000597687 CWC22Q9HCG8 908 aaKnown RBP18■□□□□ 0.47
SH2D3A-207ENST00000597687 DDX4Q9NQI0 724 aaKnown RBP18■□□□□ 0.47
SH2D3A-207ENST00000597687 USP17L5A8MUK1 530 aa17.99■□□□□ 0.47
SH2D3A-207ENST00000597687 HMGCRP04035 888 aa17.99■□□□□ 0.47
SH2D3A-207ENST00000597687 ELNP15502 786 aa17.99■□□□□ 0.47
SH2D3A-207ENST00000597687 TTC39AQ5SRH9 613 aa17.99■□□□□ 0.47
SH2D3A-207ENST00000597687 DEFB118Q96PH6 123 aa17.99■□□□□ 0.47
SH2D3A-207ENST00000597687 GABRQQ9UN88 632 aa17.99■□□□□ 0.47
SH2D3A-207ENST00000597687 HLA-DOAP06340 250 aa17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 ASNSP08243 561 aa17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 ARID4AP29374 1257 aaPredicted RBP17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 RARSP54136 660 aaKnown RBP17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 HMGCS2P54868 508 aa17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 SPP2Q13103 211 aa17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 PDE3AQ14432 1141 aa17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 NAA16Q6N069 864 aaPredicted RBP17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 SH3BP5LQ7L8J4 393 aa17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 FRAT1Q92837 279 aaPredicted RBP17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 NSUN4Q96CB9 384 aaKnown RBP17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 HMG20BQ9P0W2 317 aa17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 PI4KBQ9UBF8 816 aa17.98■□□□□ 0.47
SH2D3A-207ENST00000597687 A0A1W2PPC1 479 aa17.97■□□□□ 0.47
SH2D3A-207ENST00000597687 IGSF3O75054 1194 aa17.97■□□□□ 0.47
SH2D3A-207ENST00000597687 NECAB2Q7Z6G3 386 aa17.97■□□□□ 0.47
SH2D3A-207ENST00000597687 CERS3Q8IU89 383 aa17.97■□□□□ 0.47
SH2D3A-207ENST00000597687 TRMT2AQ8IZ69 625 aaKnown RBP17.97■□□□□ 0.47
SH2D3A-207ENST00000597687 GTF3C2Q8WUA4 911 aaPredicted RBP17.97■□□□□ 0.47
SH2D3A-207ENST00000597687 CAP2P40123 477 aa17.96■□□□□ 0.47
SH2D3A-207ENST00000597687 RHBDL3P58872 404 aa17.96■□□□□ 0.47
SH2D3A-207ENST00000597687 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
SH2D3A-207ENST00000597687 ANKLE1Q8NAG6 615 aa17.96■□□□□ 0.47
SH2D3A-207ENST00000597687 SOCS4Q8WXH5 440 aa17.96■□□□□ 0.47
SH2D3A-207ENST00000597687 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.96■□□□□ 0.47
SH2D3A-207ENST00000597687 GINM1Q9NU53 330 aa17.96■□□□□ 0.47
SH2D3A-207ENST00000597687 RBM27Q9P2N5 1060 aaKnown RBP17.96■□□□□ 0.47
SH2D3A-207ENST00000597687 FAM196BA6NMK8 535 aa17.95■□□□□ 0.46
SH2D3A-207ENST00000597687 FTSJ3Q8IY81 847 aaKnown RBP17.95■□□□□ 0.46
SH2D3A-207ENST00000597687 ZBTB7BO15156 539 aaPredicted RBP17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 TBC1D9Q6ZT07 1266 aa17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 UBE2Q1Q7Z7E8 422 aa17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 CCDC84Q86UT8 332 aaPredicted RBP17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 TRMT44Q8IYL2 757 aaKnown RBP17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 HMX1Q9NP08 348 aaPredicted RBP17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 PAK6Q9NQU5 681 aaPredicted RBP17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 AATFQ9NY61 560 aaKnown RBP eCLIP17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 DOCK3Q8IZD9 2030 aa17.94■□□□□ 0.46
SH2D3A-207ENST00000597687 C19orf81C9J6K1 198 aa17.93■□□□□ 0.46
SH2D3A-207ENST00000597687 TRIM27P14373 513 aa17.93■□□□□ 0.46
SH2D3A-207ENST00000597687 MCAMP43121 646 aa17.93■□□□□ 0.46
SH2D3A-207ENST00000597687 MTMR2Q13614 643 aa17.93■□□□□ 0.46
SH2D3A-207ENST00000597687 PI16Q6UXB8 463 aa17.93■□□□□ 0.46
SH2D3A-207ENST00000597687 ASCC2Q9H1I8 757 aaPredicted RBP17.93■□□□□ 0.46
SH2D3A-207ENST00000597687 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.93■□□□□ 0.46
SH2D3A-207ENST00000597687 RPTORQ8N122 1335 aa17.93■□□□□ 0.46
SH2D3A-207ENST00000597687 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
SH2D3A-207ENST00000597687 SH3RF3Q8TEJ3 882 aaPredicted RBP17.92■□□□□ 0.46
SH2D3A-207ENST00000597687 FEZ1Q99689 392 aa17.92■□□□□ 0.46
SH2D3A-207ENST00000597687 NUDT12Q9BQG2 462 aa17.92■□□□□ 0.46
SH2D3A-207ENST00000597687 FOCADQ5VW36 1801 aa17.92■□□□□ 0.46
SH2D3A-207ENST00000597687 USP17L10C9JJH3 530 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 MAPK4P31152 587 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 BACE1P56817 501 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 SH3D19Q5HYK7 790 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 ZKSCAN2Q63HK3 967 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 FOXP4Q8IVH2 680 aaPredicted RBP17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 GPRC5AQ8NFJ5 357 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 CLUAP1Q96AJ1 413 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 WDR18Q9BV38 432 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 NBPF3Q9H094 633 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 GPR108Q9NPR9 543 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 FLT1P17948 1338 aa17.91■□□□□ 0.46
SH2D3A-207ENST00000597687 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 ZKSCAN1P17029 563 aaPredicted RBP17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 CCNA1P78396 465 aa17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 TNNI3KQ59H18 835 aa17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 MAPKAPK5Q8IW41 473 aa17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 TGFBRAP1Q8WUH2 860 aa17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 PAWRQ96IZ0 340 aaKnown RBP17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 CRISPLD2Q9H0B8 497 aa17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 FPGT-TNNI3KV9GXZ4 949 aa17.9■□□□□ 0.46
SH2D3A-207ENST00000597687 CDK5RAP2Q96SN8 1893 aa17.89■□□□□ 0.45
SH2D3A-207ENST00000597687 USP5P45974 858 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms