RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TNPO2O14787 897 aaKnown RBP27.84■■■□□ 2.05
SSBP4-203ENST00000593641 GJB1P08034 283 aa27.84■■■□□ 2.05
SSBP4-203ENST00000593641 OS9Q13438 667 aaPredicted RBP27.84■■■□□ 2.05
SSBP4-203ENST00000593641 LOC285556D6RIA3 1793 aa27.83■■■□□ 2.05
SSBP4-203ENST00000593641 GJA8P48165 433 aa27.83■■■□□ 2.05
SSBP4-203ENST00000593641 TTC39AQ5SRH9 613 aa27.83■■■□□ 2.05
SSBP4-203ENST00000593641 TBC1D2Q9BYX2 928 aa27.83■■■□□ 2.05
SSBP4-203ENST00000593641 GABRQQ9UN88 632 aa27.83■■■□□ 2.05
SSBP4-203ENST00000593641 TRIOBPQ9H2D6 2365 aa27.82■■■□□ 2.04
SSBP4-203ENST00000593641 CCDC158Q5M9N0 1113 aa27.82■■■□□ 2.04
SSBP4-203ENST00000593641 PROCA1Q8NCQ7 364 aaPredicted RBP27.82■■■□□ 2.04
SSBP4-203ENST00000593641 GPR108Q9NPR9 543 aa27.82■■■□□ 2.04
SSBP4-203ENST00000593641 CDK5RAP2Q96SN8 1893 aa27.81■■■□□ 2.04
SSBP4-203ENST00000593641 BAG3O95817 575 aa27.81■■■□□ 2.04
SSBP4-203ENST00000593641 FLT3LGP49771 235 aa27.81■■■□□ 2.04
SSBP4-203ENST00000593641 TNNI3KQ59H18 835 aa27.81■■■□□ 2.04
SSBP4-203ENST00000593641 NAA16Q6N069 864 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-203ENST00000593641 ANKRD13CQ8N6S4 541 aa27.81■■■□□ 2.04
SSBP4-203ENST00000593641 ZNF280CQ8ND82 737 aa27.81■■■□□ 2.04
SSBP4-203ENST00000593641 HERC5Q9UII4 1024 aaKnown RBP27.81■■■□□ 2.04
SSBP4-203ENST00000593641 FPGT-TNNI3KV9GXZ4 949 aa27.81■■■□□ 2.04
SSBP4-203ENST00000593641 MYO5AQ9Y4I1 1855 aaKnown RBP27.81■■■□□ 2.04
SSBP4-203ENST00000593641 ADCY3O60266 1144 aa27.8■■■□□ 2.04
SSBP4-203ENST00000593641 PLCG2P16885 1265 aa27.8■■■□□ 2.04
SSBP4-203ENST00000593641 SPP2Q13103 211 aa27.8■■■□□ 2.04
SSBP4-203ENST00000593641 TREML2Q5T2D2 321 aa27.8■■■□□ 2.04
SSBP4-203ENST00000593641 SH3RF3Q8TEJ3 882 aaPredicted RBP27.8■■■□□ 2.04
SSBP4-203ENST00000593641 SNRKQ9NRH2 765 aa27.8■■■□□ 2.04
SSBP4-203ENST00000593641 FOCADQ5VW36 1801 aa27.8■■■□□ 2.04
SSBP4-203ENST00000593641 CAP2P40123 477 aa27.79■■■□□ 2.04
SSBP4-203ENST00000593641 PABPC4Q13310 644 aaKnown RBP eCLIP27.79■■■□□ 2.041e-6■■■■□ 22.3
SSBP4-203ENST00000593641 POLA2Q14181 598 aa27.79■■■□□ 2.04
SSBP4-203ENST00000593641 FTSJ3Q8IY81 847 aaKnown RBP27.79■■■□□ 2.04
SSBP4-203ENST00000593641 DPF3Q92784 378 aa27.79■■■□□ 2.04
SSBP4-203ENST00000593641 COA7Q96BR5 231 aa27.79■■■□□ 2.04
SSBP4-203ENST00000593641 DBNDD2Q9BQY9 259 aa27.79■■■□□ 2.04
SSBP4-203ENST00000593641 DHX36Q9H2U1 1008 aaKnown RBP27.79■■■□□ 2.04
SSBP4-203ENST00000593641 AATFQ9NY61 560 aaKnown RBP eCLIP27.79■■■□□ 2.04
SSBP4-203ENST00000593641 PI4KBQ9UBF8 816 aa27.79■■■□□ 2.04
SSBP4-203ENST00000593641 H0YGN5 161 aa27.78■■■□□ 2.04
SSBP4-203ENST00000593641 IRF5Q13568 498 aa27.78■■■□□ 2.04
SSBP4-203ENST00000593641 FAM110CQ1W6H9 321 aa27.78■■■□□ 2.04
SSBP4-203ENST00000593641 SSH3Q8TE77 659 aa27.78■■■□□ 2.04
SSBP4-203ENST00000593641 PXYLP1Q8TE99 480 aa27.78■■■□□ 2.04
SSBP4-203ENST00000593641 AS3MTQ9HBK9 375 aa27.78■■■□□ 2.04
SSBP4-203ENST00000593641 COLQQ9Y215 455 aaPredicted RBP27.78■■■□□ 2.04
SSBP4-203ENST00000593641 SIPA1L1O43166 1804 aa27.78■■■□□ 2.04
SSBP4-203ENST00000593641 USP17L5A8MUK1 530 aa27.77■■■□□ 2.04
SSBP4-203ENST00000593641 SURF6O75683 361 aaKnown RBP27.77■■■□□ 2.04
SSBP4-203ENST00000593641 HMGCS2P54868 508 aa27.77■■■□□ 2.04
SSBP4-203ENST00000593641 ATP8B2P98198 1209 aa27.77■■■□□ 2.04
SSBP4-203ENST00000593641 U2AF1L4Q8WU68 220 aaKnown RBP27.77■■■□□ 2.04
SSBP4-203ENST00000593641 HTATIP2Q9BUP3 242 aa27.77■■■□□ 2.04
SSBP4-203ENST00000593641 UNC93B1Q9H1C4 597 aa27.77■■■□□ 2.04
SSBP4-203ENST00000593641 TAOK2Q9UL54 1235 aa27.77■■■□□ 2.04
SSBP4-203ENST00000593641 INHAP05111 366 aa27.76■■■□□ 2.03
SSBP4-203ENST00000593641 ELNP15502 786 aa27.76■■■□□ 2.03
SSBP4-203ENST00000593641 GCLCP48506 637 aaPredicted RBP27.76■■■□□ 2.03
SSBP4-203ENST00000593641 C1orf115Q9H7X2 142 aa27.76■■■□□ 2.03
SSBP4-203ENST00000593641 TGFBRAP1Q8WUH2 860 aa27.75■■■□□ 2.03
SSBP4-203ENST00000593641 TRIM34Q9BYJ4 488 aa27.75■■■□□ 2.03
SSBP4-203ENST00000593641 IGSF3O75054 1194 aa27.74■■■□□ 2.03
SSBP4-203ENST00000593641 CYP2E1P05181 493 aaPredicted RBP27.74■■■□□ 2.03
SSBP4-203ENST00000593641 FXR1P51114 621 aaKnown RBP eCLIP27.74■■■□□ 2.03
SSBP4-203ENST00000593641 MAPKAPK5Q8IW41 473 aa27.74■■■□□ 2.03
SSBP4-203ENST00000593641 ITPRIPQ8IWB1 547 aa27.74■■■□□ 2.03
SSBP4-203ENST00000593641 FLT1P17948 1338 aa27.73■■■□□ 2.03
SSBP4-203ENST00000593641 FARP2O94887 1054 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-203ENST00000593641 SGPL1O95470 568 aa27.73■■■□□ 2.03
SSBP4-203ENST00000593641 ASNSP08243 561 aa27.73■■■□□ 2.03
SSBP4-203ENST00000593641 PPP4CP60510 307 aa27.73■■■□□ 2.03
SSBP4-203ENST00000593641 RRP1BQ14684 758 aaKnown RBP27.73■■■□□ 2.03
SSBP4-203ENST00000593641 UBE2Q1Q7Z7E8 422 aa27.73■■■□□ 2.03
SSBP4-203ENST00000593641 CRACR2BQ8N4Y2 399 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-203ENST00000593641 ZNF512BQ96KM6 892 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-203ENST00000593641 SH3D19Q5HYK7 790 aa27.72■■■□□ 2.03
SSBP4-203ENST00000593641 CAPN2P17655 700 aa27.71■■■□□ 2.03
SSBP4-203ENST00000593641 ZAP70P43403 619 aa27.71■■■□□ 2.03
SSBP4-203ENST00000593641 HNRNPUQ00839 825 aaKnown RBP eCLIP27.71■■■□□ 2.03
SSBP4-203ENST00000593641 ADGRA1Q86SQ6 560 aa27.71■■■□□ 2.03
SSBP4-203ENST00000593641 ASCC2Q9H1I8 757 aaPredicted RBP27.71■■■□□ 2.03
SSBP4-203ENST00000593641 TMOD4Q9NZQ9 345 aa27.71■■■□□ 2.03
SSBP4-203ENST00000593641 MYH1P12882 1939 aa27.71■■■□□ 2.03
SSBP4-203ENST00000593641 MTMR2Q13614 643 aa27.7■■■□□ 2.02
SSBP4-203ENST00000593641 CHRDL2Q6WN34 429 aa27.7■■■□□ 2.02
SSBP4-203ENST00000593641 FOXP4Q8IVH2 680 aaPredicted RBP27.7■■■□□ 2.02
SSBP4-203ENST00000593641 WDR18Q9BV38 432 aa27.7■■■□□ 2.02
SSBP4-203ENST00000593641 DBNLQ9UJU6 430 aaKnown RBP27.7■■■□□ 2.02
SSBP4-203ENST00000593641 NOP58Q9Y2X3 529 aaKnown RBP27.7■■■□□ 2.02
SSBP4-203ENST00000593641 HLA-DOAP06340 250 aa27.69■■■□□ 2.02
SSBP4-203ENST00000593641 IRX3P78415 501 aaPredicted RBP27.69■■■□□ 2.02
SSBP4-203ENST00000593641 DEFB118Q96PH6 123 aa27.69■■■□□ 2.02
SSBP4-203ENST00000593641 TFRCP02786 760 aaKnown RBP27.68■■■□□ 2.02
SSBP4-203ENST00000593641 BACE1P56817 501 aa27.68■■■□□ 2.02
SSBP4-203ENST00000593641 DNAJC18Q9H819 358 aa27.68■■■□□ 2.02
SSBP4-203ENST00000593641 PIH1D3Q9NQM4 214 aaKnown RBP27.68■■■□□ 2.02
SSBP4-203ENST00000593641 GINM1Q9NU53 330 aa27.68■■■□□ 2.02
SSBP4-203ENST00000593641 PALD1Q9ULE6 856 aa27.68■■■□□ 2.02
SSBP4-203ENST00000593641 NR2E3Q9Y5X4 410 aa27.68■■■□□ 2.02
SSBP4-203ENST00000593641 RANBP2P49792 3224 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms