RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 ATP2B1P20020 1258 aa22.04■■□□□ 1.12
MBD3-207ENST00000590550 TRIM29Q14134 588 aa22.04■■□□□ 1.12
MBD3-207ENST00000590550 TXLNBQ8N3L3 684 aa22.04■■□□□ 1.12
MBD3-207ENST00000590550 ZNF512BQ96KM6 892 aaPredicted RBP22.04■■□□□ 1.12
MBD3-207ENST00000590550 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.04■■□□□ 1.12
MBD3-207ENST00000590550 OSBPL5Q9H0X9 879 aaPredicted RBP22.04■■□□□ 1.12
MBD3-207ENST00000590550 FANCCQ00597 558 aa22.03■■□□□ 1.12
MBD3-207ENST00000590550 SUSD4Q5VX71 490 aa22.03■■□□□ 1.12
MBD3-207ENST00000590550 FOXP4Q8IVH2 680 aaPredicted RBP22.03■■□□□ 1.12
MBD3-207ENST00000590550 LCORLQ8N3X6 602 aa22.03■■□□□ 1.12
MBD3-207ENST00000590550 DDX60Q8IY21 1712 aaKnown RBP22.03■■□□□ 1.12
MBD3-207ENST00000590550 ATRNO75882 1429 aa22.03■■□□□ 1.12
MBD3-207ENST00000590550 FGFR2P21802 821 aa22.03■■□□□ 1.12
MBD3-207ENST00000590550 HPSEQ9Y251 543 aa22.03■■□□□ 1.12
MBD3-207ENST00000590550 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.02■■□□□ 1.12
MBD3-207ENST00000590550 GSG1L2A8MUP6 293 aa22.02■■□□□ 1.12
MBD3-207ENST00000590550 PATL2C9JE40 543 aaKnown RBP22.02■■□□□ 1.12
MBD3-207ENST00000590550 SFPQP23246 707 aaKnown RBP eCLIP22.02■■□□□ 1.12
MBD3-207ENST00000590550 GSDMDP57764 484 aa22.02■■□□□ 1.12
MBD3-207ENST00000590550 TMCO3Q6UWJ1 677 aa22.02■■□□□ 1.12
MBD3-207ENST00000590550 METTL16Q86W50 562 aaKnown RBP22.02■■□□□ 1.12
MBD3-207ENST00000590550 TMEM87BQ96K49 555 aa22.02■■□□□ 1.12
MBD3-207ENST00000590550 BPIFA3Q9BQP9 254 aa22.02■■□□□ 1.12
MBD3-207ENST00000590550 UQCRFS1P1P0C7P4 283 aa22.02■■□□□ 1.12
MBD3-207ENST00000590550 MPHOSPH8Q99549 860 aa22.02■■□□□ 1.12
MBD3-207ENST00000590550 WTIPA6NIX2 430 aaPredicted RBP22.01■■□□□ 1.11
MBD3-207ENST00000590550 NOP2P46087 812 aaKnown RBP22.01■■□□□ 1.11
MBD3-207ENST00000590550 TDO2P48775 406 aa22.01■■□□□ 1.11
MBD3-207ENST00000590550 GTF2A1P52655 376 aaPredicted RBP22.01■■□□□ 1.11
MBD3-207ENST00000590550 TPM4P67936 248 aa22.01■■□□□ 1.11
MBD3-207ENST00000590550 ZSCAN26Q16670 478 aa22.01■■□□□ 1.11
MBD3-207ENST00000590550 SSRP1Q08945 709 aaKnown RBP22.01■■□□□ 1.11
MBD3-207ENST00000590550 MAP3K12Q12852 859 aa22.01■■□□□ 1.11
MBD3-207ENST00000590550 SLC4A4Q9Y6R1 1079 aa22■■□□□ 1.11
MBD3-207ENST00000590550 SLIT2O94813 1529 aa22■■□□□ 1.11
MBD3-207ENST00000590550 BCL9O00512 1426 aa22■■□□□ 1.11
MBD3-207ENST00000590550 SLC5A1P13866 664 aa22■■□□□ 1.11
MBD3-207ENST00000590550 NR5A1Q13285 461 aa22■■□□□ 1.11
MBD3-207ENST00000590550 SGMS1Q86VZ5 419 aa22■■□□□ 1.11
MBD3-207ENST00000590550 NUP133Q8WUM0 1156 aa22■■□□□ 1.11
MBD3-207ENST00000590550 KCNH3Q9ULD8 1083 aa22■■□□□ 1.11
MBD3-207ENST00000590550 PCDHA5Q9Y5H7 936 aa22■■□□□ 1.11
MBD3-207ENST00000590550 ITGB4P16144 1822 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 TMEM232C9JQI7 657 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 SERPINC1P01008 464 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 PDE4BQ07343 736 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 AKNAD1Q5T1N1 836 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 RESP18Q5W5W9 173 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 MFSD6Q6ZSS7 791 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 CNNM3Q8NE01 707 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 PPP1R13BQ96KQ4 1090 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 TUBE1Q9UJT0 475 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 PPP6R2O75170 966 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 TOB1P50616 345 aaPredicted RBP21.99■■□□□ 1.11
MBD3-207ENST00000590550 ZNF34Q8IZ26 560 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 JMYQ8N9B5 988 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 IMPACTQ9P2X3 320 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 MYH3P11055 1940 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 LOC102724159A0A0B4J2E5 919 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 BMP6P22004 513 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 PWP2Q15269 919 aaKnown RBP21.99■■□□□ 1.11
MBD3-207ENST00000590550 ZNF827Q17R98 1081 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 CFAP100Q494V2 611 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 DIS3L2Q8IYB7 885 aaKnown RBP21.99■■□□□ 1.11
MBD3-207ENST00000590550 GRAMD1CQ8IYS0 662 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 CCDC34Q96HJ3 373 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 FANCLQ9NW38 375 aa21.99■■□□□ 1.11
MBD3-207ENST00000590550 MROH5Q6ZUA9 1318 aa21.98■■□□□ 1.11
MBD3-207ENST00000590550 hCG_1642624A0A1W2PR95 340 aa21.98■■□□□ 1.11
MBD3-207ENST00000590550 UBASH3AP57075 661 aa21.98■■□□□ 1.11
MBD3-207ENST00000590550 MUM1L1Q5H9M0 696 aa21.98■■□□□ 1.11
MBD3-207ENST00000590550 NOSTRINQ8IVI9 506 aa21.98■■□□□ 1.11
MBD3-207ENST00000590550 PDILTQ8N807 584 aa21.98■■□□□ 1.11
MBD3-207ENST00000590550 SDR42E1Q8WUS8 393 aa21.98■■□□□ 1.11
MBD3-207ENST00000590550 OAS2P29728 719 aaKnown RBP21.98■■□□□ 1.11
MBD3-207ENST00000590550 ABCA3Q99758 1704 aa21.98■■□□□ 1.11
MBD3-207ENST00000590550 NUP98P52948 1817 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 CASQ1P31415 396 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 OXER1Q8TDS5 423 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 ACSBG1Q96GR2 724 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 EPC1Q9H2F5 836 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.97■■□□□ 1.114e-6■■□□□ 12.6
MBD3-207ENST00000590550 LRP6O75581 1613 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 MYL5Q02045 173 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 ADGRA1Q86SQ6 560 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 ARGLU1Q9NWB6 273 aaPredicted RBP21.97■■□□□ 1.11
MBD3-207ENST00000590550 LRP2BPQ9P2M1 347 aa21.97■■□□□ 1.11
MBD3-207ENST00000590550 MINDY4BA8MYZ0 360 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 FMNL1O95466 1100 aaPredicted RBP21.96■■□□□ 1.11
MBD3-207ENST00000590550 LIFRP42702 1097 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 CCDC150Q8NCX0 1101 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 UBXN4Q92575 508 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 ABCF2Q9UG63 623 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 PCDHB6Q9Y5E3 794 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 ZRANB2O95218 330 aaKnown RBP eCLIP21.96■■□□□ 1.11
MBD3-207ENST00000590550 PRR29P0C7W0 189 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 IL6STP40189 918 aaPredicted RBP21.96■■□□□ 1.11
MBD3-207ENST00000590550 RTN1Q16799 776 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 USP49Q70CQ1 688 aa21.96■■□□□ 1.11
MBD3-207ENST00000590550 ECM29Q5VYK3 1845 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms