RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 FAM170AA1A519 330 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 DPP8Q6V1X1 898 aaPredicted RBP16.6■□□□□ 0.25
RETREG3-208ENST00000589797 AK9Q5TCS8 1911 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 NMT2O60551 498 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 RAD51AP2Q09MP3 1159 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 TMEM266Q2M3C6 531 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 CALML4Q96GE6 196 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 RBM17Q96I25 401 aaKnown RBP16.6■□□□□ 0.25
RETREG3-208ENST00000589797 VPS16Q9H269 839 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 SEPT11Q9NVA2 429 aaKnown RBP16.6■□□□□ 0.25
RETREG3-208ENST00000589797 KIAA1468Q9P260 1216 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
RETREG3-208ENST00000589797 ZNF609O15014 1411 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 CALM1P0DP23 149 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 CALM2P0DP24 149 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 CALM3P0DP25 149 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 GSDMDP57764 484 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 NOSTRINQ8IVI9 506 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 TTF2Q9UNY4 1162 aaKnown RBP16.59■□□□□ 0.25
RETREG3-208ENST00000589797 TXKP42681 527 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 RESTQ13127 1097 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 ITPK1Q13572 414 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 UBE4AQ14139 1066 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 C11orf57Q6ZUT1 292 aaPredicted RBP16.59■□□□□ 0.25
RETREG3-208ENST00000589797 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 NFE2L3Q9Y4A8 694 aa16.59■□□□□ 0.25
RETREG3-208ENST00000589797 SALL3Q9BXA9 1300 aa16.58■□□□□ 0.25
RETREG3-208ENST00000589797 PARP1P09874 1014 aaKnown RBP16.58■□□□□ 0.25
RETREG3-208ENST00000589797 GNAQP50148 359 aa16.58■□□□□ 0.25
RETREG3-208ENST00000589797 MYL5Q02045 173 aa16.58■□□□□ 0.25
RETREG3-208ENST00000589797 PPP1R9BQ96SB3 815 aa16.58■□□□□ 0.25
RETREG3-208ENST00000589797 XPO4Q9C0E2 1151 aaKnown RBP16.58■□□□□ 0.25
RETREG3-208ENST00000589797 SENP2Q9HC62 589 aa16.58■□□□□ 0.25
RETREG3-208ENST00000589797 LZTFL1Q9NQ48 299 aa16.58■□□□□ 0.25
RETREG3-208ENST00000589797 MINPP1Q9UNW1 487 aa16.58■□□□□ 0.25
RETREG3-208ENST00000589797 DPCR1Q3MIW9 517 aa16.58■□□□□ 0.24
RETREG3-208ENST00000589797 KANK3Q6NY19 840 aa16.58■□□□□ 0.24
RETREG3-208ENST00000589797 LRRC47Q8N1G4 583 aaKnown RBP16.58■□□□□ 0.24
RETREG3-208ENST00000589797 PNMA1Q8ND90 353 aa16.58■□□□□ 0.24
RETREG3-208ENST00000589797 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
RETREG3-208ENST00000589797 MMRN2Q9H8L6 949 aa16.58■□□□□ 0.24
RETREG3-208ENST00000589797 BAZ2BQ9UIF8 2168 aaKnown RBP16.58■□□□□ 0.24
RETREG3-208ENST00000589797 ECM2O94769 699 aaPredicted RBP16.58■□□□□ 0.24
RETREG3-208ENST00000589797 RRP36Q96EU6 259 aaKnown RBP16.58■□□□□ 0.24
RETREG3-208ENST00000589797 ZMYM6O95789 1325 aa16.58■□□□□ 0.24
RETREG3-208ENST00000589797 NEDD4P46934 1319 aa16.58■□□□□ 0.24
RETREG3-208ENST00000589797 FRMPD2Q68DX3 1309 aaPredicted RBP16.58■□□□□ 0.24
RETREG3-208ENST00000589797 SYT10Q6XYQ8 523 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 SOS2Q07890 1332 aaPredicted RBP16.57■□□□□ 0.24
RETREG3-208ENST00000589797 FANCCQ00597 558 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 GOLGA8FQ08AF8 430 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 GOLGA8DPQ0D2H9 430 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 FCHSD1Q86WN1 690 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 SLC44A5Q8NCS7 719 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 CCP110O43303 1012 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 IGSF3O75054 1194 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 SERPINB2P05120 415 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 CALML3P27482 149 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 MECOMQ03112 1051 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 CACNA2D4Q7Z3S7 1137 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 OGFOD1Q8N543 542 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
RETREG3-208ENST00000589797 CDC27P30260 824 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 TDRD12Q587J7 1177 aaKnown RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 ZFYVE27Q5T4F4 411 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 ARHGEF1Q92888 912 aaKnown RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 RAB34Q9BZG1 259 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 PYCARDQ9ULZ3 195 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 USP17L3A6NCW0 530 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 USP17L4A6NCW7 530 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 YEATS4O95619 227 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 ATL3Q6DD88 541 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 CCDC70Q6NSX1 233 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 USP17L1Q7RTZ2 530 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 CCDC148Q8NFR7 591 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 EYA3Q99504 573 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 C6orf50Q9HD87 102 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 PKD2L1Q9P0L9 805 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 PCDHA5Q9Y5H7 936 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 SHPRHQ149N8 1683 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 RIMS1Q86UR5 1692 aaKnown RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 WTIPA6NIX2 430 aaPredicted RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 KIF23Q02241 960 aaPredicted RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 ARID5AQ03989 594 aa16.56■□□□□ 0.24
RETREG3-208ENST00000589797 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
RETREG3-208ENST00000589797 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 LINC00301Q8NCQ3 95 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 DRC1Q96MC2 740 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 SAMM50Q9Y512 469 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 SH2B2O14492 632 aaPredicted RBP16.55■□□□□ 0.24
RETREG3-208ENST00000589797 ZSCAN12O43309 604 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 BTDP43251 543 aa16.55■□□□□ 0.24
RETREG3-208ENST00000589797 CHMP4BP1P59074 171 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms