RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 ABCC12Q96J65 1359 aa12.71□□□□□ -0.37
GFAP-216ENST00000589701 MYH15Q9Y2K3 1946 aa12.71□□□□□ -0.37
GFAP-216ENST00000589701 SPTLC2O15270 562 aa12.71□□□□□ -0.38
GFAP-216ENST00000589701 NMT2O60551 498 aa12.71□□□□□ -0.38
GFAP-216ENST00000589701 AXDND1Q5T1B0 1012 aaPredicted RBP12.71□□□□□ -0.38
GFAP-216ENST00000589701 RBM43Q6ZSC3 357 aaKnown RBP12.71□□□□□ -0.38
GFAP-216ENST00000589701 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.38
GFAP-216ENST00000589701 BAZ2AQ9UIF9 1905 aaKnown RBP12.71□□□□□ -0.38
GFAP-216ENST00000589701 BTBD18B2RXH4 712 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 DYNC1I1O14576 645 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 GNPATO15228 680 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 DHX16O60231 1041 aaKnown RBP12.7□□□□□ -0.38
GFAP-216ENST00000589701 GRIN1Q05586 938 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 NR5A1Q13285 461 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 EZH2Q15910 746 aaKnown RBP12.7□□□□□ -0.38
GFAP-216ENST00000589701 NTRK3Q16288 839 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 FMR1NBQ8N0W7 255 aaPredicted RBP12.7□□□□□ -0.38
GFAP-216ENST00000589701 AOPEPQ8N6M6 819 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
GFAP-216ENST00000589701 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 COL1A1P02452 1464 aaPredicted RBP12.7□□□□□ -0.38
GFAP-216ENST00000589701 ZMYM6O95789 1325 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 NPHP1O15259 732 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 IARSP41252 1262 aaKnown RBP12.7□□□□□ -0.38
GFAP-216ENST00000589701 IQCB1Q15051 598 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 AKNAD1Q5T1N1 836 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 FILIP1Q7Z7B0 1213 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 ANKRD18AQ8IVF6 992 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
GFAP-216ENST00000589701 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
GFAP-216ENST00000589701 RREB1Q92766 1687 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 DDX60Q8IY21 1712 aaKnown RBP12.69□□□□□ -0.38
GFAP-216ENST00000589701 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
GFAP-216ENST00000589701 IRF6O14896 467 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 CAPN2P17655 700 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 ZNF75DP51815 510 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 EGFL6Q8IUX8 553 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
GFAP-216ENST00000589701 GEMIN8Q9NWZ8 242 aaKnown RBP12.69□□□□□ -0.38
GFAP-216ENST00000589701 MYH2Q9UKX2 1941 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 FOXN1O15353 648 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 PFKFB1P16118 471 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 PRDX5P30044 214 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 PARP10Q53GL7 1025 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
GFAP-216ENST00000589701 FAM84BQ96KN1 310 aaPredicted RBP12.68□□□□□ -0.38
GFAP-216ENST00000589701 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.38
GFAP-216ENST00000589701 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 BECN2A8MW95 431 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 GOLGA6L19H0YKK7 550 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 ZNF202O95125 648 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 NOM1Q5C9Z4 860 aaKnown RBP12.68□□□□□ -0.38
GFAP-216ENST00000589701 ADALQ6DHV7 355 aa12.68□□□□□ -0.38
GFAP-216ENST00000589701 CYP2D6P10635 497 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 PPARAQ07869 468 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 FBXL16Q8N461 479 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 CACTINQ8WUQ7 758 aaKnown RBP12.67□□□□□ -0.38
GFAP-216ENST00000589701 PLCD4Q9BRC7 762 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 MAGEB6P1A0A0J9YX57 407 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 FAM47AQ5JRC9 791 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 SHC4Q6S5L8 630 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 NBPF5PQ86XG9 351 aaPredicted RBP12.67□□□□□ -0.38
GFAP-216ENST00000589701 SHISA4Q96DD7 197 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 C16orf45Q96MC5 204 aaPredicted RBP12.67□□□□□ -0.38
GFAP-216ENST00000589701 RGPD3A6NKT7 1758 aaPredicted RBP12.67□□□□□ -0.38
GFAP-216ENST00000589701 RGPD4Q7Z3J3 1758 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 C4AP0C0L4 1744 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 C4BP0C0L5 1744 aa12.67□□□□□ -0.38
GFAP-216ENST00000589701 PNOCQ13519 176 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 WTAPQ15007 396 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
GFAP-216ENST00000589701 PDILTQ8N807 584 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 TDRD7Q8NHU6 1098 aaKnown RBP12.66□□□□□ -0.38
GFAP-216ENST00000589701 KIAA1524Q8TCG1 905 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 CDC5LQ99459 802 aaKnown RBP12.66□□□□□ -0.38
GFAP-216ENST00000589701 VEGFAP15692 232 aaPredicted RBP12.66□□□□□ -0.38
GFAP-216ENST00000589701 STX1AQ16623 288 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 USP49Q70CQ1 688 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 PLA2G4DQ86XP0 818 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 GRAMD1CQ8IYS0 662 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 POLR3EQ9NVU0 708 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 MYH13Q9UKX3 1938 aa12.66□□□□□ -0.38
GFAP-216ENST00000589701 USP17L12C9JPN9 530 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 USP17L21D6R901 530 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 VPS54Q9P1Q0 977 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 TNKSO95271 1327 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 SBF2Q86WG5 1849 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 CHD4Q14839 1912 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 WNT7AO00755 349 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 ADAMTS3O15072 1205 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 PLEKHA8P1O95397 391 aa12.65□□□□□ -0.38
GFAP-216ENST00000589701 SSRP1Q08945 709 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms