RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 DNMT3LQ9UJW3 386 aa10.51□□□□□ -0.73
ATG4D-210ENST00000588972 TMA7Q9Y2S6 64 aaKnown RBP10.51□□□□□ -0.73
ATG4D-210ENST00000588972 GOLGB1Q14789 3259 aaKnown RBP10.51□□□□□ -0.73
ATG4D-210ENST00000588972 ATXN7O15265 892 aaPredicted RBP10.5□□□□□ -0.73
ATG4D-210ENST00000588972 THBS1P07996 1170 aa10.5□□□□□ -0.73
ATG4D-210ENST00000588972 RARAP10276 462 aa10.5□□□□□ -0.73
ATG4D-210ENST00000588972 TMEM74Q96NL1 305 aa10.5□□□□□ -0.73
ATG4D-210ENST00000588972 CNTNAP3BQ96NU0 1288 aa10.5□□□□□ -0.73
ATG4D-210ENST00000588972 CNTNAP3Q9BZ76 1288 aa10.5□□□□□ -0.73
ATG4D-210ENST00000588972 OSBPL2Q9H1P3 480 aa10.5□□□□□ -0.73
ATG4D-210ENST00000588972 AKAP2Q9Y2D5 859 aa10.5□□□□□ -0.73
ATG4D-210ENST00000588972 AKAP12Q02952 1782 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 TLDC2A0PJX2 215 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 MINDY4BA8MYZ0 360 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 PLSCR1O15162 318 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 FBXO24O75426 580 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 AVPP01185 164 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 GBP2P32456 591 aaPredicted RBP10.49□□□□□ -0.73
ATG4D-210ENST00000588972 LBRQ14739 615 aaKnown RBP10.49□□□□□ -0.73
ATG4D-210ENST00000588972 FIGNL1Q6PIW4 674 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 DTHD1Q6ZMT9 781 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 CDK19Q9BWU1 502 aa10.49□□□□□ -0.73
ATG4D-210ENST00000588972 BRD4O60885 1362 aaPredicted RBP10.49□□□□□ -0.73
ATG4D-210ENST00000588972 SLIT3O75094 1523 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 KIF4AO95239 1232 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 GCP02774 474 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
ATG4D-210ENST00000588972 EIF4A3P38919 411 aaKnown RBP10.48□□□□□ -0.73
ATG4D-210ENST00000588972 COL13A1Q5TAT6 717 aaPredicted RBP10.48□□□□□ -0.73
ATG4D-210ENST00000588972 SV2BQ7L1I2 683 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 CCNJLQ8IV13 435 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 EAF1Q96JC9 268 aaPredicted RBP10.48□□□□□ -0.73
ATG4D-210ENST00000588972 ZFP42Q96MM3 310 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 ZKSCAN3Q9BRR0 538 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 BCL9O00512 1426 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 PPIP5K1Q6PFW1 1433 aa10.48□□□□□ -0.73
ATG4D-210ENST00000588972 DCDC2BA2VCK2 349 aa10.47□□□□□ -0.73
ATG4D-210ENST00000588972 KHNYNO15037 678 aaKnown RBP10.47□□□□□ -0.73
ATG4D-210ENST00000588972 ACPPP15309 386 aa10.47□□□□□ -0.73
ATG4D-210ENST00000588972 GRIN2CQ14957 1233 aa10.47□□□□□ -0.73
ATG4D-210ENST00000588972 RHOVQ96L33 236 aa10.47□□□□□ -0.73
ATG4D-210ENST00000588972 CARD11Q9BXL7 1154 aa10.47□□□□□ -0.73
ATG4D-210ENST00000588972 PCDHGC4Q9Y5F7 938 aa10.47□□□□□ -0.73
ATG4D-210ENST00000588972 CENPJQ9HC77 1338 aaPredicted RBP10.47□□□□□ -0.73
ATG4D-210ENST00000588972 AATKQ6ZMQ8 1374 aa10.47□□□□□ -0.73
ATG4D-210ENST00000588972 RLBP1P12271 317 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 NFKB1P19838 968 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 SOX18P35713 384 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 TNP2Q05952 138 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 UBAP2LQ14157 1087 aaKnown RBP10.46□□□□□ -0.73
ATG4D-210ENST00000588972 DDB1Q16531 1140 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 MAP3K11Q16584 847 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.46□□□□□ -0.73
ATG4D-210ENST00000588972 NCAPG2Q86XI2 1143 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 ZNF296Q8WUU4 475 aaPredicted RBP10.46□□□□□ -0.73
ATG4D-210ENST00000588972 OSMRQ99650 979 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 KCNQ5Q9NR82 932 aa10.46□□□□□ -0.73
ATG4D-210ENST00000588972 TLR7Q9NYK1 1049 aaKnown RBP10.46□□□□□ -0.73
ATG4D-210ENST00000588972 PIK3C2AO00443 1686 aa10.46□□□□□ -0.74
ATG4D-210ENST00000588972 COL18A1P39060 1754 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 USP6P35125 1406 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 FAM187AA6NFU0 413 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 ZBTB7AO95365 584 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 SSBP05455 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
ATG4D-210ENST00000588972 PSAPP07602 524 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 HOXD8P13378 290 aaPredicted RBP10.45□□□□□ -0.74
ATG4D-210ENST00000588972 NASPP49321 788 aaPredicted RBP10.45□□□□□ -0.74
ATG4D-210ENST00000588972 LAMC2Q13753 1193 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 TPTE2Q6XPS3 522 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 PHC3Q8NDX5 983 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 PNMA5Q96PV4 448 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 HCN2Q9UL51 889 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 PDZRN3Q9UPQ7 1066 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 EFR3BQ9Y2G0 817 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.45□□□□□ -0.74
ATG4D-210ENST00000588972 CHD4Q14839 1912 aa10.45□□□□□ -0.74
ATG4D-210ENST00000588972 CPSF1Q10570 1443 aaKnown RBP10.44□□□□□ -0.74
ATG4D-210ENST00000588972 ANKRD62A6NC57 917 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 CELA3AP09093 270 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 MAPTP10636 758 aaKnown RBP10.44□□□□□ -0.74
ATG4D-210ENST00000588972 GARTP22102 1010 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 GRIA4P48058 902 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 HYAL2Q12891 473 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 BMS1Q14692 1282 aaKnown RBP10.44□□□□□ -0.74
ATG4D-210ENST00000588972 FBXL19Q6PCT2 694 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 TOM1L2Q6ZVM7 507 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 CKAP2LQ8IYA6 745 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 NT5C1AQ9BXI3 368 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 PDGFDQ9GZP0 370 aaPredicted RBP10.44□□□□□ -0.74
ATG4D-210ENST00000588972 ZNF408Q9H9D4 720 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 GINM1Q9NU53 330 aa10.44□□□□□ -0.74
ATG4D-210ENST00000588972 CEP350Q5VT06 3117 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 WDR17Q8IZU2 1322 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 PPM1GO15355 546 aaPredicted RBP10.43□□□□□ -0.74
ATG4D-210ENST00000588972 TRPA1O75762 1119 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 MAP3K6O95382 1288 aa10.43□□□□□ -0.74
ATG4D-210ENST00000588972 NCLP19338 710 aaKnown RBP10.43□□□□□ -0.74
ATG4D-210ENST00000588972 SMCPP49901 116 aaPredicted RBP10.43□□□□□ -0.74
ATG4D-210ENST00000588972 LIG3P49916 1009 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms