RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 CHAF1AQ13111 956 aaPredicted RBP17.7■□□□□ 0.42
MBD1-217ENST00000588937 SAFBQ15424 915 aaKnown RBP eCLIP17.7■□□□□ 0.42
MBD1-217ENST00000588937 IQCA1Q86XH1 822 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 ZNF654Q8IZM8 581 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 JMYQ8N9B5 988 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 WDR66Q8TBY9 1149 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 ZKSCAN3Q9BRR0 538 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 GOLPH3LQ9H4A5 285 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 QSER1Q2KHR3 1735 aa17.7■□□□□ 0.42
MBD1-217ENST00000588937 XDHP47989 1333 aa17.69■□□□□ 0.42
MBD1-217ENST00000588937 IRS2Q9Y4H2 1338 aa17.69■□□□□ 0.42
MBD1-217ENST00000588937 ZNF500O60304 480 aaPredicted RBP17.69■□□□□ 0.42
MBD1-217ENST00000588937 DEXIO95424 95 aa17.69■□□□□ 0.42
MBD1-217ENST00000588937 U2AF2P26368 475 aaKnown RBP eCLIP17.69■□□□□ 0.423e-7■■□□□ 12.2
MBD1-217ENST00000588937 NT5C2P49902 561 aa17.69■□□□□ 0.42
MBD1-217ENST00000588937 ZNF384Q8TF68 577 aa17.69■□□□□ 0.42
MBD1-217ENST00000588937 RPGRQ92834 1020 aaKnown RBP17.69■□□□□ 0.42
MBD1-217ENST00000588937 GJB4Q9NTQ9 266 aa17.69■□□□□ 0.42
MBD1-217ENST00000588937 TNKSO95271 1327 aa17.69■□□□□ 0.42
MBD1-217ENST00000588937 SEC23AQ15436 765 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
MBD1-217ENST00000588937 STK11IPQ8N1F8 1099 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 FANCBQ8NB91 859 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 CAMKK2Q96RR4 588 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 ZSCAN10Q96SZ4 725 aaPredicted RBP17.68■□□□□ 0.42
MBD1-217ENST00000588937 LAMB1P07942 1786 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 BAZ2AQ9UIF9 1905 aaKnown RBP17.68■□□□□ 0.42
MBD1-217ENST00000588937 PPP6R2O75170 966 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 TPM3P06753 285 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 CALM1P0DP23 149 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 CALM2P0DP24 149 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 CALM3P0DP25 149 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 PLCB2Q00722 1185 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 SLC39A14Q15043 492 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 STX1AQ16623 288 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 CTR9Q6PD62 1173 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 C15orf52Q6ZUT6 534 aaKnown RBP17.68■□□□□ 0.42
MBD1-217ENST00000588937 ZNF804AQ7Z570 1209 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 FMR1NBQ8N0W7 255 aaPredicted RBP17.68■□□□□ 0.42
MBD1-217ENST00000588937 AIFM3Q96NN9 605 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 CBX8Q9HC52 389 aa17.68■□□□□ 0.42
MBD1-217ENST00000588937 ARPP21Q9UBL0 812 aaPredicted RBP17.68■□□□□ 0.42
MBD1-217ENST00000588937 DLEC1Q9Y238 1755 aa17.67■□□□□ 0.42
MBD1-217ENST00000588937 ZNF165P49910 485 aa17.67■□□□□ 0.42
MBD1-217ENST00000588937 GSTO1P78417 241 aa17.67■□□□□ 0.42
MBD1-217ENST00000588937 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
MBD1-217ENST00000588937 SBK1Q52WX2 424 aa17.67■□□□□ 0.42
MBD1-217ENST00000588937 PRR5LQ6MZQ0 368 aa17.67■□□□□ 0.42
MBD1-217ENST00000588937 CATIPQ7Z7H3 387 aa17.67■□□□□ 0.42
MBD1-217ENST00000588937 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
MBD1-217ENST00000588937 NUP133Q8WUM0 1156 aa17.67■□□□□ 0.42
MBD1-217ENST00000588937 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
MBD1-217ENST00000588937 RBM28Q9NW13 759 aaKnown RBP17.67■□□□□ 0.42
MBD1-217ENST00000588937 AATFQ9NY61 560 aaKnown RBP eCLIP17.67■□□□□ 0.42
MBD1-217ENST00000588937 GOLGA6L6A8MZA4 724 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 USP17L12C9JPN9 530 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 USP17L21D6R901 530 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 ORC4O43929 436 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 CMA1P23946 247 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 PRDX5P30044 214 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
MBD1-217ENST00000588937 IFIT1BQ5T764 474 aaKnown RBP17.66■□□□□ 0.42
MBD1-217ENST00000588937 TDRD7Q8NHU6 1098 aaKnown RBP17.66■□□□□ 0.42
MBD1-217ENST00000588937 RBM17Q96I25 401 aaKnown RBP17.66■□□□□ 0.42
MBD1-217ENST00000588937 RNF26Q9BY78 433 aaPredicted RBP17.66■□□□□ 0.42
MBD1-217ENST00000588937 DCP1AQ9NPI6 582 aaPredicted RBP17.66■□□□□ 0.42
MBD1-217ENST00000588937 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.66■□□□□ 0.42
MBD1-217ENST00000588937 MMP1P03956 469 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 LDHBP07195 334 aaKnown RBP17.66■□□□□ 0.42
MBD1-217ENST00000588937 XBP1P17861 261 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 NBPF11Q86T75 865 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 ANO10Q9NW15 660 aa17.66■□□□□ 0.42
MBD1-217ENST00000588937 MYH2Q9UKX2 1941 aa17.65■□□□□ 0.42
MBD1-217ENST00000588937 A0A1B0GVL5 298 aa17.65■□□□□ 0.42
MBD1-217ENST00000588937 PDE4BQ07343 736 aa17.65■□□□□ 0.42
MBD1-217ENST00000588937 CRY2Q49AN0 593 aa17.65■□□□□ 0.42
MBD1-217ENST00000588937 LUZP1Q86V48 1076 aa17.65■□□□□ 0.42
MBD1-217ENST00000588937 TXNRD3Q86VQ6 643 aa17.65■□□□□ 0.42
MBD1-217ENST00000588937 CERS3Q8IU89 383 aa17.65■□□□□ 0.42
MBD1-217ENST00000588937 ENAHQ8N8S7 591 aaPredicted RBP17.65■□□□□ 0.42
MBD1-217ENST00000588937 DNAJC25Q9H1X3 360 aa17.65■□□□□ 0.42
MBD1-217ENST00000588937 FOXP1Q9H334 677 aaPredicted RBP17.65■□□□□ 0.42
MBD1-217ENST00000588937 NRXN2Q9P2S2 1712 aa17.64■□□□□ 0.41
MBD1-217ENST00000588937 DDAH1O94760 285 aa17.64■□□□□ 0.41
MBD1-217ENST00000588937 SERPINB2P05120 415 aa17.64■□□□□ 0.41
MBD1-217ENST00000588937 ATP2B4P23634 1241 aa17.64■□□□□ 0.41
MBD1-217ENST00000588937 NDUFA8P51970 172 aa17.64■□□□□ 0.41
MBD1-217ENST00000588937 NAT10Q9H0A0 1025 aaKnown RBP17.64■□□□□ 0.41
MBD1-217ENST00000588937 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
MBD1-217ENST00000588937 GOLGA6L19H0YKK7 550 aa17.63■□□□□ 0.41
MBD1-217ENST00000588937 BBOX1O75936 387 aa17.63■□□□□ 0.41
MBD1-217ENST00000588937 BAG3O95817 575 aa17.63■□□□□ 0.41
MBD1-217ENST00000588937 LDHCP07864 332 aa17.63■□□□□ 0.41
MBD1-217ENST00000588937 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
MBD1-217ENST00000588937 AXDND1Q5T1B0 1012 aaPredicted RBP17.63■□□□□ 0.41
MBD1-217ENST00000588937 ILDR2Q71H61 639 aa17.63■□□□□ 0.41
MBD1-217ENST00000588937 NOSTRINQ8IVI9 506 aa17.63■□□□□ 0.41
MBD1-217ENST00000588937 NOL10Q9BSC4 688 aaKnown RBP17.63■□□□□ 0.41
MBD1-217ENST00000588937 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms