RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 LOC285556D6RIA3 1793 aa19.55■□□□□ 0.72
ERCC1-206ENST00000588300 HNRNPUQ00839 825 aaKnown RBP eCLIP19.55■□□□□ 0.72
ERCC1-206ENST00000588300 NAA16Q6N069 864 aaPredicted RBP19.55■□□□□ 0.72
ERCC1-206ENST00000588300 SNRKQ9NRH2 765 aa19.55■□□□□ 0.72
ERCC1-206ENST00000588300 AGTPBP1Q9UPW5 1226 aa19.55■□□□□ 0.72
ERCC1-206ENST00000588300 SURF6O75683 361 aaKnown RBP19.54■□□□□ 0.72
ERCC1-206ENST00000588300 BAG3O95817 575 aa19.54■□□□□ 0.72
ERCC1-206ENST00000588300 UBXN2AP68543 259 aa19.54■□□□□ 0.72
ERCC1-206ENST00000588300 NKX2-3Q8TAU0 364 aa19.54■□□□□ 0.72
ERCC1-206ENST00000588300 SH3RF3Q8TEJ3 882 aaPredicted RBP19.54■□□□□ 0.72
ERCC1-206ENST00000588300 DBNDD2Q9BQY9 259 aa19.54■□□□□ 0.72
ERCC1-206ENST00000588300 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
ERCC1-206ENST00000588300 BIN2Q9UBW5 565 aaPredicted RBP19.54■□□□□ 0.72
ERCC1-206ENST00000588300 HERC5Q9UII4 1024 aaKnown RBP19.54■□□□□ 0.72
ERCC1-206ENST00000588300 PNMA3Q9UL41 463 aa19.54■□□□□ 0.72
ERCC1-206ENST00000588300 CDK5RAP2Q96SN8 1893 aa19.54■□□□□ 0.72
ERCC1-206ENST00000588300 FOCADQ5VW36 1801 aa19.53■□□□□ 0.72
ERCC1-206ENST00000588300 PLCG2P16885 1265 aa19.53■□□□□ 0.72
ERCC1-206ENST00000588300 HABP4Q5JVS0 413 aaKnown RBP19.53■□□□□ 0.72
ERCC1-206ENST00000588300 ITPRIPQ8IWB1 547 aa19.53■□□□□ 0.72
ERCC1-206ENST00000588300 PROCA1Q8NCQ7 364 aaPredicted RBP19.53■□□□□ 0.72
ERCC1-206ENST00000588300 SLAIN1Q8ND83 568 aa19.53■□□□□ 0.72
ERCC1-206ENST00000588300 C1orf115Q9H7X2 142 aa19.53■□□□□ 0.72
ERCC1-206ENST00000588300 AATFQ9NY61 560 aaKnown RBP eCLIP19.53■□□□□ 0.72
ERCC1-206ENST00000588300 MYO5AQ9Y4I1 1855 aaKnown RBP19.53■□□□□ 0.72
ERCC1-206ENST00000588300 SIPA1L1O43166 1804 aa19.53■□□□□ 0.72
ERCC1-206ENST00000588300 IGSF3O75054 1194 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 CCL5P13501 91 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 CAP2P40123 477 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 SPP2Q13103 211 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 TREML2Q5T2D2 321 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 ZNF280CQ8ND82 737 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 SHISA4Q96DD7 197 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 ZNF512BQ96KM6 892 aaPredicted RBP19.52■□□□□ 0.72
ERCC1-206ENST00000588300 DHX36Q9H2U1 1008 aaKnown RBP19.52■□□□□ 0.72
ERCC1-206ENST00000588300 PI4KBQ9UBF8 816 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 GABRQQ9UN88 632 aa19.52■□□□□ 0.72
ERCC1-206ENST00000588300 USP17L5A8MUK1 530 aa19.51■□□□□ 0.71
ERCC1-206ENST00000588300 TNPO2O14787 897 aaKnown RBP19.51■□□□□ 0.71
ERCC1-206ENST00000588300 CYP2E1P05181 493 aaPredicted RBP19.51■□□□□ 0.71
ERCC1-206ENST00000588300 GJB1P08034 283 aa19.51■□□□□ 0.71
ERCC1-206ENST00000588300 PPP4CP60510 307 aa19.51■□□□□ 0.71
ERCC1-206ENST00000588300 RNF208Q9H0X6 261 aa19.51■□□□□ 0.71
ERCC1-206ENST00000588300 AS3MTQ9HBK9 375 aa19.51■□□□□ 0.71
ERCC1-206ENST00000588300 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
ERCC1-206ENST00000588300 ADCY3O60266 1144 aa19.5■□□□□ 0.71
ERCC1-206ENST00000588300 GJA8P48165 433 aa19.5■□□□□ 0.71
ERCC1-206ENST00000588300 FLT3LGP49771 235 aa19.5■□□□□ 0.71
ERCC1-206ENST00000588300 PABPC4Q13310 644 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■■■□□ 15.1
ERCC1-206ENST00000588300 FAM110CQ1W6H9 321 aa19.5■□□□□ 0.71
ERCC1-206ENST00000588300 ANKRD13CQ8N6S4 541 aa19.5■□□□□ 0.71
ERCC1-206ENST00000588300 ZBTB7BO15156 539 aaPredicted RBP19.49■□□□□ 0.71
ERCC1-206ENST00000588300 RLBP1P12271 317 aa19.49■□□□□ 0.71
ERCC1-206ENST00000588300 ZAP70P43403 619 aa19.49■□□□□ 0.71
ERCC1-206ENST00000588300 HMGCS2P54868 508 aa19.49■□□□□ 0.71
ERCC1-206ENST00000588300 RRP1BQ14684 758 aaKnown RBP19.49■□□□□ 0.71
ERCC1-206ENST00000588300 ADGRA1Q86SQ6 560 aa19.49■□□□□ 0.71
ERCC1-206ENST00000588300 MAPKAPK5Q8IW41 473 aa19.49■□□□□ 0.71
ERCC1-206ENST00000588300 TGFBRAP1Q8WUH2 860 aa19.49■□□□□ 0.71
ERCC1-206ENST00000588300 COA7Q96BR5 231 aa19.49■□□□□ 0.71
ERCC1-206ENST00000588300 DBNLQ9UJU6 430 aaKnown RBP19.49■□□□□ 0.71
ERCC1-206ENST00000588300 FLT1P17948 1338 aa19.49■□□□□ 0.71
ERCC1-206ENST00000588300 GCLCP48506 637 aaPredicted RBP19.48■□□□□ 0.71
ERCC1-206ENST00000588300 IRF5Q13568 498 aa19.48■□□□□ 0.71
ERCC1-206ENST00000588300 SH3D19Q5HYK7 790 aa19.48■□□□□ 0.71
ERCC1-206ENST00000588300 PXYLP1Q8TE99 480 aa19.48■□□□□ 0.71
ERCC1-206ENST00000588300 TRIM34Q9BYJ4 488 aa19.48■□□□□ 0.71
ERCC1-206ENST00000588300 ASNSP08243 561 aa19.47■□□□□ 0.71
ERCC1-206ENST00000588300 FOXP4Q8IVH2 680 aaPredicted RBP19.47■□□□□ 0.71
ERCC1-206ENST00000588300 CRACR2BQ8N4Y2 399 aaPredicted RBP19.47■□□□□ 0.71
ERCC1-206ENST00000588300 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
ERCC1-206ENST00000588300 UNC93B1Q9H1C4 597 aa19.47■□□□□ 0.71
ERCC1-206ENST00000588300 PIH1D3Q9NQM4 214 aaKnown RBP19.47■□□□□ 0.71
ERCC1-206ENST00000588300 TLR7Q9NYK1 1049 aaKnown RBP19.47■□□□□ 0.71
ERCC1-206ENST00000588300 INHAP05111 366 aa19.46■□□□□ 0.71
ERCC1-206ENST00000588300 ELNP15502 786 aa19.46■□□□□ 0.71
ERCC1-206ENST00000588300 MIER1Q8N108 512 aa19.46■□□□□ 0.71
ERCC1-206ENST00000588300 U2AF1L4Q8WU68 220 aaKnown RBP19.46■□□□□ 0.71
ERCC1-206ENST00000588300 EAF2Q96CJ1 260 aaPredicted RBP19.46■□□□□ 0.71
ERCC1-206ENST00000588300 WDR18Q9BV38 432 aa19.46■□□□□ 0.71
ERCC1-206ENST00000588300 ASCC2Q9H1I8 757 aaPredicted RBP19.46■□□□□ 0.71
ERCC1-206ENST00000588300 DOCK3Q8IZD9 2030 aa19.46■□□□□ 0.71
ERCC1-206ENST00000588300 MYH1P12882 1939 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 H0YGN5 161 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 IDH1O75874 414 aaKnown RBP19.45■□□□□ 0.7
ERCC1-206ENST00000588300 HLA-DOAP06340 250 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 CYP7A1P22680 504 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 MTMR2Q13614 643 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 CEP85Q6P2H3 762 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 METTL16Q86W50 562 aaKnown RBP19.45■□□□□ 0.7
ERCC1-206ENST00000588300 HTATIP2Q9BUP3 242 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 DNAJC18Q9H819 358 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 GINM1Q9NU53 330 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 TAOK2Q9UL54 1235 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 PALD1Q9ULE6 856 aa19.45■□□□□ 0.7
ERCC1-206ENST00000588300 SGPL1O95470 568 aa19.44■□□□□ 0.7
ERCC1-206ENST00000588300 BACE1P56817 501 aa19.44■□□□□ 0.7
ERCC1-206ENST00000588300 DYNLL1P63167 89 aaKnown RBP19.44■□□□□ 0.7
ERCC1-206ENST00000588300 UBE2Q1Q7Z7E8 422 aa19.44■□□□□ 0.7
ERCC1-206ENST00000588300 CERS3Q8IU89 383 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms