RNA–Protein interactions for RNA: ENST00000588118.5

DNMT1-214, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-214ENST00000588118 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
DNMT1-214ENST00000588118 ENTPD3O75355 529 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 TMEM67Q5HYA8 995 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 SGMS1Q86VZ5 419 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 IGDCC4Q8TDY8 1250 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 DPF2Q92785 391 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
DNMT1-214ENST00000588118 MKNK2Q9HBH9 465 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 TACC3Q9Y6A5 838 aa16.05■□□□□ 0.16
DNMT1-214ENST00000588118 COL2A1P02458 1487 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-214ENST00000588118 ECM29Q5VYK3 1845 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 MYO1BO43795 1136 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 DHX16O60231 1041 aaKnown RBP16.04■□□□□ 0.16
DNMT1-214ENST00000588118 PFKFB2O60825 505 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 LARGE1O95461 756 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
DNMT1-214ENST00000588118 PLCD1P51178 756 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 PRELPP51888 382 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 ZNF280AP59817 542 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-214ENST00000588118 APOBRQ0VD83 1088 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 WTAPQ15007 396 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 FKBP1CQ5VVH2 108 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 CCDC83Q8IWF9 413 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
DNMT1-214ENST00000588118 STK11IPQ8N1F8 1099 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 GTF3C6Q969F1 213 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
DNMT1-214ENST00000588118 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 SWAP70Q9UH65 585 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 SMC3Q9UQE7 1217 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 ADAMTSL1Q8N6G6 1762 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 MYH1P12882 1939 aa16.04■□□□□ 0.16
DNMT1-214ENST00000588118 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
DNMT1-214ENST00000588118 RANBP6O60518 1105 aaKnown RBP16.03■□□□□ 0.16
DNMT1-214ENST00000588118 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
DNMT1-214ENST00000588118 RCAN1P53805 252 aa16.03■□□□□ 0.16
DNMT1-214ENST00000588118 NUCB2P80303 420 aa16.03■□□□□ 0.16
DNMT1-214ENST00000588118 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
DNMT1-214ENST00000588118 PRMT6Q96LA8 375 aaPredicted RBP16.03■□□□□ 0.16
DNMT1-214ENST00000588118 LLPHQ9BRT6 129 aaKnown RBP16.03■□□□□ 0.16
DNMT1-214ENST00000588118 EHD4Q9H223 541 aa16.03■□□□□ 0.16
DNMT1-214ENST00000588118 TDRD3Q9H7E2 651 aaKnown RBP16.03■□□□□ 0.16
DNMT1-214ENST00000588118 LY9Q9HBG7 655 aa16.03■□□□□ 0.16
DNMT1-214ENST00000588118 CCDC69A6NI79 296 aa16.02■□□□□ 0.16
DNMT1-214ENST00000588118 TSPY2A6NKD2 308 aa16.02■□□□□ 0.16
DNMT1-214ENST00000588118 NECAB1Q8N987 351 aa16.02■□□□□ 0.16
DNMT1-214ENST00000588118 ZSCAN10Q96SZ4 725 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-214ENST00000588118 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.15
DNMT1-214ENST00000588118 TNKSO95271 1327 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 GOLGA8BA8MQT2 603 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 SMIM22K7EJ46 135 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 PRDM1O75626 825 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 CDK8P49336 464 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 GABPAQ06546 454 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 NFIAQ12857 509 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 STK3Q13188 491 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 DYNLL2Q96FJ2 89 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 ZBED3Q96IU2 234 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-214ENST00000588118 MYOZ2Q9NPC6 264 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 TCP11L1Q9NUJ3 509 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 ZNF70Q9UC06 446 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-214ENST00000588118 FAM198AQ9UFP1 575 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 SERPINB13Q9UIV8 391 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 NAP1L2Q9ULW6 460 aaPredicted RBP16.01■□□□□ 0.15
DNMT1-214ENST00000588118 PCDHAC2Q9Y5I4 1007 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 SLC12A7Q9Y666 1083 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 GJA3Q9Y6H8 435 aa16.01■□□□□ 0.15
DNMT1-214ENST00000588118 ATRNL1Q5VV63 1379 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 ZBTB43O43298 467 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 GMPSP49915 693 aaPredicted RBP16■□□□□ 0.15
DNMT1-214ENST00000588118 HMGN5P82970 282 aaKnown RBP16■□□□□ 0.15
DNMT1-214ENST00000588118 TFAP4Q01664 338 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 ST3GAL1Q11201 340 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 SCRN1Q12765 414 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 PPP2R5BQ15173 497 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 SEC23AQ15436 765 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 CPLX2Q6PUV4 134 aaKnown RBP16■□□□□ 0.15
DNMT1-214ENST00000588118 APOA5Q6Q788 366 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 FOXP4Q8IVH2 680 aaPredicted RBP16■□□□□ 0.15
DNMT1-214ENST00000588118 GPC2Q8N158 579 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 NKX2-3Q8TAU0 364 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
DNMT1-214ENST00000588118 BRPF3Q9ULD4 1205 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 KIF3AQ9Y496 699 aa16■□□□□ 0.15
DNMT1-214ENST00000588118 ZNF541Q9H0D2 1346 aa15.99■□□□□ 0.15
DNMT1-214ENST00000588118 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
DNMT1-214ENST00000588118 TSPY3P0CV98 308 aa15.99■□□□□ 0.15
DNMT1-214ENST00000588118 TSPY8P0CW00 308 aa15.99■□□□□ 0.15
DNMT1-214ENST00000588118 CALM1P0DP23 149 aa15.99■□□□□ 0.15
DNMT1-214ENST00000588118 CALM2P0DP24 149 aa15.99■□□□□ 0.15
DNMT1-214ENST00000588118 CALM3P0DP25 149 aa15.99■□□□□ 0.15
DNMT1-214ENST00000588118 YBX3P16989 372 aaKnown RBP eCLIP15.99■□□□□ 0.15
DNMT1-214ENST00000588118 RASA1P20936 1047 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms