RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SLC6A16Q9GZN6 736 aa6.84□□□□□ -1.31
SDF2-206ENST00000587788 ALDH8A1Q9H2A2 487 aaPredicted RBP6.84□□□□□ -1.31
SDF2-206ENST00000587788 HMG20BQ9P0W2 317 aa6.84□□□□□ -1.31
SDF2-206ENST00000587788 CEP126Q9P2H0 1117 aa6.84□□□□□ -1.31
SDF2-206ENST00000587788 ATP6V1DQ9Y5K8 247 aa6.84□□□□□ -1.31
SDF2-206ENST00000587788 SNX14Q9Y5W7 946 aa6.84□□□□□ -1.31
SDF2-206ENST00000587788 DDX49Q9Y6V7 483 aaKnown RBP6.84□□□□□ -1.31
SDF2-206ENST00000587788 PSME4Q14997 1843 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 EYA2O00167 538 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 BRD1O95696 1058 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 XRCC6P12956 609 aaKnown RBP eCLIP6.83□□□□□ -1.32
SDF2-206ENST00000587788 NCLP19338 710 aaKnown RBP6.83□□□□□ -1.32
SDF2-206ENST00000587788 RFX5P48382 616 aaPredicted RBP6.83□□□□□ -1.32
SDF2-206ENST00000587788 ZNF445P59923 1031 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 KRT32Q14532 448 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 LRRFIP1Q32MZ4 808 aaKnown RBP6.83□□□□□ -1.32
SDF2-206ENST00000587788 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 MCTP1Q6DN14 999 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 PTCRAQ6ISU1 281 aaPredicted RBP6.83□□□□□ -1.32
SDF2-206ENST00000587788 CWC27Q6UX04 472 aaKnown RBP6.83□□□□□ -1.32
SDF2-206ENST00000587788 LDHAL6AQ6ZMR3 332 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 C7orf43Q8WVR3 580 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 SYAP1Q96A49 352 aaPredicted RBP6.83□□□□□ -1.32
SDF2-206ENST00000587788 EAF2Q96CJ1 260 aaPredicted RBP6.83□□□□□ -1.32
SDF2-206ENST00000587788 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
SDF2-206ENST00000587788 UNC93B1Q9H1C4 597 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 GRPEL1Q9HAV7 217 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 PALD1Q9ULE6 856 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 CHMP3Q9Y3E7 222 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 CYP46A1Q9Y6A2 500 aa6.83□□□□□ -1.32
SDF2-206ENST00000587788 CCDC171Q6TFL3 1326 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 HOXA10P31260 410 aaPredicted RBP6.82□□□□□ -1.32
SDF2-206ENST00000587788 CTSWP56202 376 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 NECTIN1Q15223 517 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 TNNI3KQ59H18 835 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 C9orf131Q5VYM1 1079 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 SH3BP5LQ7L8J4 393 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 ZGPATQ8N5A5 531 aaKnown RBP6.82□□□□□ -1.32
SDF2-206ENST00000587788 NKX2-3Q8TAU0 364 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 MAP4K1Q92918 833 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 CNKSR1Q969H4 720 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 CHMP4CQ96CF2 233 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 TTC14Q96N46 770 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 CDC5LQ99459 802 aaKnown RBP6.82□□□□□ -1.32
SDF2-206ENST00000587788 MPHOSPH8Q99549 860 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 FSD1Q9BTV5 496 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 LMBRD1Q9NUN5 540 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 PCDH10Q9P2E7 1040 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 BRPF3Q9ULD4 1205 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 PA2G4Q9UQ80 394 aaKnown RBP6.82□□□□□ -1.32
SDF2-206ENST00000587788 RIPOR2Q9Y4F9 1068 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 FPGT-TNNI3KV9GXZ4 949 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 SCN9AQ15858 1988 aa6.82□□□□□ -1.32
SDF2-206ENST00000587788 WDR90Q96KV7 1748 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
SDF2-206ENST00000587788 MAP4K4O95819 1239 aaPredicted RBP6.81□□□□□ -1.32
SDF2-206ENST00000587788 S1PR4O95977 384 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 CASTP20810 708 aaKnown RBP6.81□□□□□ -1.32
SDF2-206ENST00000587788 PDCP20941 246 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 ITGA6P23229 1130 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 IGHMBP2P38935 993 aaKnown RBP6.81□□□□□ -1.32
SDF2-206ENST00000587788 KCNJ4P48050 445 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 CCDC158Q5M9N0 1113 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 RUFY3Q7L099 469 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 ZNF526Q8TF50 670 aaPredicted RBP6.81□□□□□ -1.32
SDF2-206ENST00000587788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.81□□□□□ -1.32
SDF2-206ENST00000587788 RPGRQ92834 1020 aaKnown RBP6.81□□□□□ -1.32
SDF2-206ENST00000587788 PBXIP1Q96AQ6 731 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 HAUS7Q99871 368 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 CNNM1Q9NRU3 951 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 PDRG1Q9NUG6 133 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 RNF181Q9P0P0 153 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 ZDHHC9Q9Y397 364 aa6.81□□□□□ -1.32
SDF2-206ENST00000587788 SCN4AP35499 1836 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 MROH5Q6ZUA9 1318 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 PPEF1O14829 653 aaPredicted RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 PRPF40AO75400 957 aaKnown RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 BBOX1O75936 387 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 LETM1O95202 739 aaPredicted RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 HMGB1P09429 215 aaKnown RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 LMNB1P20700 586 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 ALDH1B1P30837 517 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 AK2P54819 239 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 RPS8P62241 208 aaKnown RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 PTK2Q05397 1052 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 TFCP2Q12800 502 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 SEMA3FQ13275 785 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 NMIQ13287 307 aaPredicted RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 CREB3L3Q68CJ9 461 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 ATG9AQ7Z3C6 839 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 SH3RF1Q7Z6J0 888 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 SPNS2Q8IVW8 549 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 TMEM87AQ8NBN3 555 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 CELF1Q92879 486 aaKnown RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 RBM17Q96I25 401 aaKnown RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 JAKMIP1Q96N16 626 aaKnown RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 CRAMP1Q96RY5 1269 aa6.8□□□□□ -1.32
SDF2-206ENST00000587788 UPF3BQ9BZI7 483 aaKnown RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 CCDC8Q9H0W5 538 aaPredicted RBP6.8□□□□□ -1.32
SDF2-206ENST00000587788 SIL1Q9H173 461 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms