RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ELNP15502 786 aa17.33■□□□□ 0.36
DNMT1-213ENST00000587604 ARID4AP29374 1257 aaPredicted RBP17.33■□□□□ 0.36
DNMT1-213ENST00000587604 SPP2Q13103 211 aa17.33■□□□□ 0.36
DNMT1-213ENST00000587604 TREML2Q5T2D2 321 aa17.33■□□□□ 0.36
DNMT1-213ENST00000587604 PI16Q6UXB8 463 aa17.33■□□□□ 0.36
DNMT1-213ENST00000587604 ANKRD13CQ8N6S4 541 aa17.33■□□□□ 0.36
DNMT1-213ENST00000587604 COA7Q96BR5 231 aa17.33■□□□□ 0.36
DNMT1-213ENST00000587604 TBC1D2Q9BYX2 928 aa17.33■□□□□ 0.36
DNMT1-213ENST00000587604 RAI14Q9P0K7 980 aa17.33■□□□□ 0.36
DNMT1-213ENST00000587604 COL2A1P02458 1487 aaPredicted RBP17.32■□□□□ 0.36
DNMT1-213ENST00000587604 FAM196BA6NMK8 535 aa17.32■□□□□ 0.36
DNMT1-213ENST00000587604 FARP2O94887 1054 aaPredicted RBP17.32■□□□□ 0.36
DNMT1-213ENST00000587604 INHAP05111 366 aa17.32■□□□□ 0.36
DNMT1-213ENST00000587604 UQCRFS1P1P0C7P4 283 aa17.32■□□□□ 0.36
DNMT1-213ENST00000587604 CAP2P40123 477 aa17.32■□□□□ 0.36
DNMT1-213ENST00000587604 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
DNMT1-213ENST00000587604 FAM110CQ1W6H9 321 aa17.32■□□□□ 0.36
DNMT1-213ENST00000587604 ZNF280CQ8ND82 737 aa17.32■□□□□ 0.36
DNMT1-213ENST00000587604 NR2E3Q9Y5X4 410 aa17.32■□□□□ 0.36
DNMT1-213ENST00000587604 ATAD5Q96QE3 1844 aa17.31■□□□□ 0.36
DNMT1-213ENST00000587604 PNMA6EA0A0J9YXQ4 647 aa17.31■□□□□ 0.36
DNMT1-213ENST00000587604 TRIM27P14373 513 aa17.31■□□□□ 0.36
DNMT1-213ENST00000587604 MCAMP43121 646 aa17.31■□□□□ 0.36
DNMT1-213ENST00000587604 GCLCP48506 637 aaPredicted RBP17.31■□□□□ 0.36
DNMT1-213ENST00000587604 ATF7IPQ6VMQ6 1270 aa17.31■□□□□ 0.36
DNMT1-213ENST00000587604 LRP2BPQ9P2M1 347 aa17.31■□□□□ 0.36
DNMT1-213ENST00000587604 RBM27Q9P2N5 1060 aaKnown RBP17.31■□□□□ 0.36
DNMT1-213ENST00000587604 HERC5Q9UII4 1024 aaKnown RBP17.31■□□□□ 0.36
DNMT1-213ENST00000587604 TFRCP02786 760 aaKnown RBP17.3■□□□□ 0.36
DNMT1-213ENST00000587604 PABPC4Q13310 644 aaKnown RBP eCLIP17.3■□□□□ 0.36
DNMT1-213ENST00000587604 TEX11Q8IYF3 940 aa17.3■□□□□ 0.36
DNMT1-213ENST00000587604 PAK6Q9NQU5 681 aaPredicted RBP17.3■□□□□ 0.36
DNMT1-213ENST00000587604 PI4KBQ9UBF8 816 aa17.3■□□□□ 0.36
DNMT1-213ENST00000587604 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
DNMT1-213ENST00000587604 USP17L5A8MUK1 530 aa17.29■□□□□ 0.36
DNMT1-213ENST00000587604 CCER2I3L3R5 266 aa17.29■□□□□ 0.36
DNMT1-213ENST00000587604 HMGCS2P54868 508 aa17.29■□□□□ 0.36
DNMT1-213ENST00000587604 RRP1BQ14684 758 aaKnown RBP17.29■□□□□ 0.36
DNMT1-213ENST00000587604 SH3D19Q5HYK7 790 aa17.29■□□□□ 0.36
DNMT1-213ENST00000587604 DEFB118Q96PH6 123 aa17.29■□□□□ 0.36
DNMT1-213ENST00000587604 NOL10Q9BSC4 688 aaKnown RBP17.29■□□□□ 0.36
DNMT1-213ENST00000587604 DHX36Q9H2U1 1008 aaKnown RBP17.29■□□□□ 0.36
DNMT1-213ENST00000587604 ZBTB7BO15156 539 aaPredicted RBP17.28■□□□□ 0.36
DNMT1-213ENST00000587604 BAG3O95817 575 aa17.28■□□□□ 0.36
DNMT1-213ENST00000587604 SH3RF3Q8TEJ3 882 aaPredicted RBP17.28■□□□□ 0.36
DNMT1-213ENST00000587604 FRAT1Q92837 279 aaPredicted RBP17.28■□□□□ 0.36
DNMT1-213ENST00000587604 CRISPLD2Q9H0B8 497 aa17.28■□□□□ 0.36
DNMT1-213ENST00000587604 ASCC2Q9H1I8 757 aaPredicted RBP17.28■□□□□ 0.36
DNMT1-213ENST00000587604 PRO3102Q9H379 93 aa17.28■□□□□ 0.36
DNMT1-213ENST00000587604 AS3MTQ9HBK9 375 aa17.28■□□□□ 0.36
DNMT1-213ENST00000587604 TAOK2Q9UL54 1235 aa17.28■□□□□ 0.36
DNMT1-213ENST00000587604 BCAR3O75815 825 aa17.27■□□□□ 0.36
DNMT1-213ENST00000587604 PLCG2P16885 1265 aa17.27■□□□□ 0.36
DNMT1-213ENST00000587604 PPP4CP60510 307 aa17.27■□□□□ 0.36
DNMT1-213ENST00000587604 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
DNMT1-213ENST00000587604 CLUAP1Q96AJ1 413 aa17.27■□□□□ 0.36
DNMT1-213ENST00000587604 WDR18Q9BV38 432 aa17.27■□□□□ 0.36
DNMT1-213ENST00000587604 GPR108Q9NPR9 543 aa17.27■□□□□ 0.36
DNMT1-213ENST00000587604 AATFQ9NY61 560 aaKnown RBP eCLIP17.27■□□□□ 0.36
DNMT1-213ENST00000587604 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
DNMT1-213ENST00000587604 EVI5O60447 810 aa17.26■□□□□ 0.35
DNMT1-213ENST00000587604 IGSF3O75054 1194 aa17.26■□□□□ 0.35
DNMT1-213ENST00000587604 CCDC158Q5M9N0 1113 aa17.26■□□□□ 0.35
DNMT1-213ENST00000587604 FOXP4Q8IVH2 680 aaPredicted RBP17.26■□□□□ 0.35
DNMT1-213ENST00000587604 SNRKQ9NRH2 765 aa17.26■□□□□ 0.35
DNMT1-213ENST00000587604 GJD2Q9UKL4 321 aa17.26■□□□□ 0.35
DNMT1-213ENST00000587604 CDK5RAP2Q96SN8 1893 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 HMGCRP04035 888 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 ASNSP08243 561 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 BACE1P56817 501 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 POLA2Q14181 598 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 TNNI3KQ59H18 835 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 TTC39AQ5SRH9 613 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 METTL16Q86W50 562 aaKnown RBP17.25■□□□□ 0.35
DNMT1-213ENST00000587604 TGFBRAP1Q8WUH2 860 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.25■□□□□ 0.35
DNMT1-213ENST00000587604 MORF4L1Q9UBU8 362 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 FPGT-TNNI3KV9GXZ4 949 aa17.25■□□□□ 0.35
DNMT1-213ENST00000587604 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
DNMT1-213ENST00000587604 SIPA1L1O43166 1804 aa17.24■□□□□ 0.35
DNMT1-213ENST00000587604 C19orf81C9J6K1 198 aa17.24■□□□□ 0.35
DNMT1-213ENST00000587604 CYP2E1P05181 493 aaPredicted RBP17.24■□□□□ 0.35
DNMT1-213ENST00000587604 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
DNMT1-213ENST00000587604 ATP8B2P98198 1209 aa17.24■□□□□ 0.35
DNMT1-213ENST00000587604 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
DNMT1-213ENST00000587604 PAWRQ96IZ0 340 aaKnown RBP17.24■□□□□ 0.35
DNMT1-213ENST00000587604 ZNF512BQ96KM6 892 aaPredicted RBP17.24■□□□□ 0.35
DNMT1-213ENST00000587604 DBNDD2Q9BQY9 259 aa17.24■□□□□ 0.35
DNMT1-213ENST00000587604 GINM1Q9NU53 330 aa17.24■□□□□ 0.35
DNMT1-213ENST00000587604 TMOD4Q9NZQ9 345 aa17.24■□□□□ 0.35
DNMT1-213ENST00000587604 FOCADQ5VW36 1801 aa17.24■□□□□ 0.35
DNMT1-213ENST00000587604 RPTORQ8N122 1335 aa17.23■□□□□ 0.35
DNMT1-213ENST00000587604 IRX3P78415 501 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-213ENST00000587604 MTMR2Q13614 643 aa17.23■□□□□ 0.35
DNMT1-213ENST00000587604 NECAB2Q7Z6G3 386 aa17.23■□□□□ 0.35
DNMT1-213ENST00000587604 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
DNMT1-213ENST00000587604 MAPKAPK5Q8IW41 473 aa17.23■□□□□ 0.35
DNMT1-213ENST00000587604 TMEM57Q8N5G2 664 aa17.23■□□□□ 0.35
DNMT1-213ENST00000587604 ANKLE1Q8NAG6 615 aa17.23■□□□□ 0.35
DNMT1-213ENST00000587604 LAMA3Q16787 3333 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms