RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 GLIS2Q9BZE0 524 aaPredicted RBP20.17■□□□□ 0.82
PRKCSH-203ENST00000586486 NBPF3Q9H094 633 aa20.17■□□□□ 0.82
PRKCSH-203ENST00000586486 HERC5Q9UII4 1024 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-203ENST00000586486 SLC27A2O14975 620 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 TBC1D12O60347 775 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 MAP3K10Q02779 954 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 EVX2Q03828 476 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 SLC4A8Q2Y0W8 1093 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 CREB3L3Q68CJ9 461 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 FOXP4Q8IVH2 680 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 UPF2Q9HAU5 1272 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 SLC3A2P08195 630 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 PCP11498 1178 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 MCCP23508 829 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 HAND2P61296 217 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 SUPT20HL1Q3ZLR7 823 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 NBPF12Q5TAG4 269 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 C16orf86Q6ZW13 317 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 CDCA5Q96FF9 252 aa20.16■□□□□ 0.82
PRKCSH-203ENST00000586486 SMIM22K7EJ46 135 aa20.15■□□□□ 0.82
PRKCSH-203ENST00000586486 FGRP09769 529 aa20.15■□□□□ 0.82
PRKCSH-203ENST00000586486 TSGA10IPQ3SY00 556 aa20.15■□□□□ 0.82
PRKCSH-203ENST00000586486 TBC1D10CQ8IV04 446 aa20.15■□□□□ 0.82
PRKCSH-203ENST00000586486 STAG1Q8WVM7 1258 aa20.15■□□□□ 0.82
PRKCSH-203ENST00000586486 DNAJC18Q9H819 358 aa20.15■□□□□ 0.82
PRKCSH-203ENST00000586486 SWAP70Q9UH65 585 aa20.15■□□□□ 0.82
PRKCSH-203ENST00000586486 CTDSPL2Q05D32 466 aa20.14■□□□□ 0.81
PRKCSH-203ENST00000586486 CRACR2BQ8N4Y2 399 aaPredicted RBP20.14■□□□□ 0.81
PRKCSH-203ENST00000586486 RNF41Q9H4P4 317 aaPredicted RBP20.14■□□□□ 0.81
PRKCSH-203ENST00000586486 PAPPA2Q9BXP8 1791 aa20.14■□□□□ 0.81
PRKCSH-203ENST00000586486 ZKSCAN1P17029 563 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 AKNAD1Q5T1N1 836 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 PRAMEF18Q5VWM3 479 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 DCAF15Q66K64 600 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 RBM46Q8TBY0 533 aaKnown RBP20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 DYNLL2Q96FJ2 89 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 ZNF287Q9HBT7 754 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 TRPM7Q96QT4 1865 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 TOMM70O94826 608 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 ITGBL1O95965 494 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 NT5C2P49902 561 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 PDE4BQ07343 736 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 SMC1BQ8NDV3 1235 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 TAF6LQ9Y6J9 622 aa20.13■□□□□ 0.81
PRKCSH-203ENST00000586486 ORC4O43929 436 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 NF2P35240 595 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 CDK8P49336 464 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 RBM25P49756 843 aaKnown RBP20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 ANAPC15P60006 121 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 TATDN1Q6P1N9 297 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 DLK2Q6UY11 383 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 RASEFQ8IZ41 740 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 IL17RAQ96F46 866 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 TRIM34Q9BYJ4 488 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 TACC3Q9Y6A5 838 aa20.12■□□□□ 0.81
PRKCSH-203ENST00000586486 TRAF5O00463 557 aa20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 SHMT1P34896 483 aa20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 KRT32Q14532 448 aa20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 MFSD6Q6ZSS7 791 aa20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 SLC44A5Q8NCS7 719 aa20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 C22orf23Q9BZE7 217 aa20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 CNNM2Q9H8M5 875 aa20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 SNX14Q9Y5W7 946 aa20.11■□□□□ 0.81
PRKCSH-203ENST00000586486 E7EWF7 191 aa20.1■□□□□ 0.81
PRKCSH-203ENST00000586486 STOX1Q6ZVD7 989 aa20.1■□□□□ 0.81
PRKCSH-203ENST00000586486 MIGA2Q7L4E1 593 aa20.1■□□□□ 0.81
PRKCSH-203ENST00000586486 ZNF341Q9BYN7 854 aa20.1■□□□□ 0.81
PRKCSH-203ENST00000586486 GREB1LQ9C091 1923 aaPredicted RBP20.1■□□□□ 0.81
PRKCSH-203ENST00000586486 OTOFQ9HC10 1997 aa20.1■□□□□ 0.81
PRKCSH-203ENST00000586486 NEDD4P46934 1319 aa20.1■□□□□ 0.81
PRKCSH-203ENST00000586486 FAM196BA6NMK8 535 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 SLURP2P0DP57 97 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 TBC1D32Q96NH3 1257 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 ATAD5Q96QE3 1844 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 PHF20L1A8MW92 1017 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 RASA1P20936 1047 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 STK11IPQ8N1F8 1099 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 KRT23Q9C075 422 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 MKNK2Q9HBH9 465 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 ZNF112Q9UJU3 913 aa20.09■□□□□ 0.81
PRKCSH-203ENST00000586486 DOCK1Q14185 1865 aa20.08■□□□□ 0.81
PRKCSH-203ENST00000586486 PLIN4Q96Q06 1357 aa20.08■□□□□ 0.81
PRKCSH-203ENST00000586486 PPP1R12BO60237 982 aaPredicted RBP20.08■□□□□ 0.8
PRKCSH-203ENST00000586486 FSTL1Q12841 308 aa20.08■□□□□ 0.8
PRKCSH-203ENST00000586486 TRDNQ13061 729 aa20.08■□□□□ 0.8
PRKCSH-203ENST00000586486 CCDC17Q96LX7 622 aa20.08■□□□□ 0.8
PRKCSH-203ENST00000586486 INCENPQ9NQS7 918 aa20.08■□□□□ 0.8
PRKCSH-203ENST00000586486 PRDM1O75626 825 aa20.07■□□□□ 0.8
PRKCSH-203ENST00000586486 FKBP1BP68106 108 aa20.07■□□□□ 0.8
PRKCSH-203ENST00000586486 MAP3K11Q16584 847 aa20.07■□□□□ 0.8
PRKCSH-203ENST00000586486 NCOA7Q8NI08 942 aa20.07■□□□□ 0.8
PRKCSH-203ENST00000586486 ESR2Q92731 530 aa20.07■□□□□ 0.8
PRKCSH-203ENST00000586486 KLRG1Q96E93 195 aa20.07■□□□□ 0.8
PRKCSH-203ENST00000586486 FMR1Q06787 632 aaKnown RBP eCLIP20.06■□□□□ 0.8
PRKCSH-203ENST00000586486 ADCK5Q3MIX3 580 aa20.06■□□□□ 0.8
PRKCSH-203ENST00000586486 RALYLQ86SE5 291 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-203ENST00000586486 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.06■□□□□ 0.85e-12■■□□□ 12.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms