RNA–Protein interactions for RNA: ENST00000584335.5

SNX11-213, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-213ENST00000584335 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
SNX11-213ENST00000584335 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
SNX11-213ENST00000584335 MKRN1Q9UHC7 482 aaKnown RBP11.08□□□□□ -0.64
SNX11-213ENST00000584335 JAG2Q9Y219 1238 aa11.08□□□□□ -0.64
SNX11-213ENST00000584335 ZDHHC9Q9Y397 364 aa11.08□□□□□ -0.64
SNX11-213ENST00000584335 WDR33Q9C0J8 1336 aaKnown RBP11.08□□□□□ -0.64
SNX11-213ENST00000584335 PSME4Q14997 1843 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 ROBO3Q96MS0 1386 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 NAV1Q8NEY1 1877 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 CDK5RAP2Q96SN8 1893 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 POLD1P28340 1107 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 GJB2P29033 226 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 PDIA3P30101 505 aaKnown RBP11.07□□□□□ -0.64
SNX11-213ENST00000584335 LIFRP42702 1097 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 APOBRQ0VD83 1088 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 CCDC93Q567U6 631 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 SOGA3Q5TF21 947 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 CYB5R4Q7L1T6 521 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 RTKN2Q8IZC4 609 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 NECAB1Q8N987 351 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 SMARCC2Q8TAQ2 1214 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNX11-213ENST00000584335 MRIQ9BWK5 157 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 LRRC2Q9BYS8 371 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
SNX11-213ENST00000584335 TACC3Q9Y6A5 838 aa11.07□□□□□ -0.64
SNX11-213ENST00000584335 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
SNX11-213ENST00000584335 NID2Q14112 1375 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 BAZ2AQ9UIF9 1905 aaKnown RBP11.06□□□□□ -0.64
SNX11-213ENST00000584335 DDX11L8A8MPP1 907 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 B4E1Z4 1266 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 SH2B2O14492 632 aaPredicted RBP11.06□□□□□ -0.64
SNX11-213ENST00000584335 ORC4O43929 436 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 DPEP1P16444 411 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 PDCP20941 246 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 PKP1Q13835 747 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 NBR1Q14596 966 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 DIXDC1Q155Q3 683 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 STRIP1Q5VSL9 837 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 IGDCC4Q8TDY8 1250 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 ZSWIM5Q9P217 1185 aa11.06□□□□□ -0.64
SNX11-213ENST00000584335 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 USP17L21D6R901 530 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 STX6O43752 255 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 ECE2O60344 883 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 KDM4AO75164 1064 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 SLC3A2P08195 630 aaKnown RBP11.05□□□□□ -0.64
SNX11-213ENST00000584335 HOXB3P14651 431 aaPredicted RBP11.05□□□□□ -0.64
SNX11-213ENST00000584335 SYT1P21579 422 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 BTDP43251 543 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 RCAN1P53805 252 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 HMGN5P82970 282 aaKnown RBP11.05□□□□□ -0.64
SNX11-213ENST00000584335 HDLBPQ00341 1268 aaKnown RBP11.05□□□□□ -0.64
SNX11-213ENST00000584335 SCRN1Q12765 414 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 SART3Q15020 963 aaKnown RBP11.05□□□□□ -0.64
SNX11-213ENST00000584335 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 HHIPL2Q6UWX4 724 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 CHST3Q7LGC8 479 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 TMTC2Q8N394 836 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 CERS5Q8N5B7 392 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
SNX11-213ENST00000584335 ESR2Q92731 530 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 CRISPLD2Q9H0B8 497 aa11.05□□□□□ -0.64
SNX11-213ENST00000584335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
SNX11-213ENST00000584335 KLF18A0A0U1RQI7 1052 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 MINDY4BA8MYZ0 360 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 C21orf2O43822 256 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
SNX11-213ENST00000584335 ZBTB7AO95365 584 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 BAG4O95429 457 aaKnown RBP11.04□□□□□ -0.64
SNX11-213ENST00000584335 ZSCAN22P10073 491 aaPredicted RBP11.04□□□□□ -0.64
SNX11-213ENST00000584335 USP5P45974 858 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 RHBDL3P58872 404 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 STK3Q13188 491 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 DSG2Q14126 1118 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 DACT2Q5SW24 774 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 C12orf60Q5U649 245 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 AMOTL1Q8IY63 956 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 RGS22Q8NE09 1264 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 NSUN7Q8NE18 718 aaKnown RBP11.04□□□□□ -0.64
SNX11-213ENST00000584335 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 DBNDD1Q9H9R9 158 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 PIM2Q9P1W9 311 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 BRPF3Q9ULD4 1205 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 DAGLAQ9Y4D2 1042 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 CD2APQ9Y5K6 639 aa11.04□□□□□ -0.64
SNX11-213ENST00000584335 SCN9AQ15858 1988 aa11.03□□□□□ -0.64
SNX11-213ENST00000584335 USP17L3A6NCW0 530 aa11.03□□□□□ -0.64
SNX11-213ENST00000584335 USP17L4A6NCW7 530 aa11.03□□□□□ -0.64
SNX11-213ENST00000584335 GOLGA6L22H0YM25 854 aa11.03□□□□□ -0.64
SNX11-213ENST00000584335 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
SNX11-213ENST00000584335 PLCB2Q00722 1185 aa11.03□□□□□ -0.64
SNX11-213ENST00000584335 PDE4BQ07343 736 aa11.03□□□□□ -0.64
SNX11-213ENST00000584335 R3HDM1Q15032 1099 aaKnown RBP11.03□□□□□ -0.64
SNX11-213ENST00000584335 AOC3Q16853 763 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms