RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 PAPPAQ13219 1627 aa9.93□□□□□ -0.82
BDNF-219ENST00000584049 AKAP11Q9UKA4 1901 aa9.93□□□□□ -0.82
BDNF-219ENST00000584049 SEMA3EO15041 775 aa9.93□□□□□ -0.82
BDNF-219ENST00000584049 ERLIN1O75477 346 aa9.93□□□□□ -0.82
BDNF-219ENST00000584049 FMNL1O95466 1100 aaPredicted RBP9.93□□□□□ -0.82
BDNF-219ENST00000584049 FECHP22830 423 aa9.93□□□□□ -0.82
BDNF-219ENST00000584049 FMR1Q06787 632 aaKnown RBP eCLIP9.93□□□□□ -0.82
BDNF-219ENST00000584049 SAFBQ15424 915 aaKnown RBP eCLIP9.93□□□□□ -0.82
BDNF-219ENST00000584049 ZSCAN26Q16670 478 aa9.93□□□□□ -0.82
BDNF-219ENST00000584049 CCDC51Q96ER9 411 aa9.93□□□□□ -0.82
BDNF-219ENST00000584049 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
BDNF-219ENST00000584049 FEZ2Q9UHY8 353 aaPredicted RBP9.93□□□□□ -0.82
BDNF-219ENST00000584049 ZBTB22O15209 634 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 SSRP1Q08945 709 aaKnown RBP9.92□□□□□ -0.82
BDNF-219ENST00000584049 IGDCC4Q8TDY8 1250 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 FOXP1Q9H334 677 aaPredicted RBP9.92□□□□□ -0.82
BDNF-219ENST00000584049 ADGRG1Q9Y653 693 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 TIAM2Q8IVF5 1701 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 KIF5CO60282 957 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
BDNF-219ENST00000584049 EIF3JO75822 258 aaKnown RBP9.92□□□□□ -0.82
BDNF-219ENST00000584049 IFNAR1P17181 557 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 ADKP55263 362 aaKnown RBP9.92□□□□□ -0.82
BDNF-219ENST00000584049 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
BDNF-219ENST00000584049 SCARF1Q14162 830 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 HDXQ7Z353 690 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 FAM217BQ9NTX9 383 aaPredicted RBP9.92□□□□□ -0.82
BDNF-219ENST00000584049 CEP131Q9UPN4 1083 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 MMP1P03956 469 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 PHKBQ93100 1093 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 CTAGE1Q96RT6 745 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 EPC1Q9H2F5 836 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 MRPL44Q9H9J2 332 aaKnown RBP9.92□□□□□ -0.82
BDNF-219ENST00000584049 LY9Q9HBG7 655 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 ADAM21Q9UKJ8 722 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 RIC1Q4ADV7 1423 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 KCPQ6ZWJ8 1503 aa9.92□□□□□ -0.82
BDNF-219ENST00000584049 PBX1P40424 430 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 RCAN1P53805 252 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 MICU3Q86XE3 530 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 C1orf167Q5SNV9 1468 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 RPS6KA5O75582 802 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 BEND6Q5SZJ8 279 aaPredicted RBP9.91□□□□□ -0.82
BDNF-219ENST00000584049 RASGRP2Q7LDG7 609 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 MTA3Q9BTC8 594 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 TTF2Q9UNY4 1162 aaKnown RBP9.91□□□□□ -0.82
BDNF-219ENST00000584049 SRPRBQ9Y5M8 271 aaKnown RBP9.91□□□□□ -0.82
BDNF-219ENST00000584049 ITIH6Q6UXX5 1313 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 FOXN1O15353 648 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 ACTN4O43707 911 aaKnown RBP9.91□□□□□ -0.82
BDNF-219ENST00000584049 ZC3H6P61129 1189 aaKnown RBP9.91□□□□□ -0.82
BDNF-219ENST00000584049 KARSQ15046 597 aaKnown RBP9.91□□□□□ -0.82
BDNF-219ENST00000584049 SPATA1Q5VX52 437 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 APTXQ7Z2E3 356 aaKnown RBP9.91□□□□□ -0.82
BDNF-219ENST00000584049 PPFIBP1Q86W92 1011 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 ZCCHC17Q9NP64 241 aaKnown RBP9.91□□□□□ -0.82
BDNF-219ENST00000584049 MYO1AQ9UBC5 1043 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 SERTAD1Q9UHV2 236 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 CSF1RP07333 972 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 IVLP07476 585 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 ACTN2P35609 894 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 TMEM67Q5HYA8 995 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 NFXL1Q6ZNB6 911 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 DESI2Q9BSY9 194 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 ANKZF1Q9H8Y5 726 aa9.91□□□□□ -0.82
BDNF-219ENST00000584049 H3BQF6 201 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 POLR2DO15514 142 aaKnown RBP9.9□□□□□ -0.82
BDNF-219ENST00000584049 PCCAP05165 728 aaPredicted RBP9.9□□□□□ -0.82
BDNF-219ENST00000584049 PRR29P0C7W0 189 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 TOB1P50616 345 aaPredicted RBP9.9□□□□□ -0.82
BDNF-219ENST00000584049 WHAMMP3Q1A5X7 153 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 CNGA4Q8IV77 575 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
BDNF-219ENST00000584049 MED15Q96RN5 788 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 CNNM2Q9H8M5 875 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 CHD4Q14839 1912 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 MYO5AQ9Y4I1 1855 aaKnown RBP9.9□□□□□ -0.82
BDNF-219ENST00000584049 B4E1Z4 1266 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 DIS3L2Q8IYB7 885 aaKnown RBP9.9□□□□□ -0.82
BDNF-219ENST00000584049 TRIM22Q8IYM9 498 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 SLC26A6Q9BXS9 759 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 TEX13AQ9BXU3 409 aaPredicted RBP9.9□□□□□ -0.82
BDNF-219ENST00000584049 SLC12A7Q9Y666 1083 aa9.9□□□□□ -0.82
BDNF-219ENST00000584049 MFAP3LO75121 409 aa9.9□□□□□ -0.83
BDNF-219ENST00000584049 MCAMP43121 646 aa9.9□□□□□ -0.83
BDNF-219ENST00000584049 TCIRG1Q13488 830 aa9.9□□□□□ -0.83
BDNF-219ENST00000584049 CDKAL1Q5VV42 579 aa9.9□□□□□ -0.83
BDNF-219ENST00000584049 SAMSN1Q9NSI8 373 aaKnown RBP9.9□□□□□ -0.83
BDNF-219ENST00000584049 L1RE1Q9UN81 338 aa9.9□□□□□ -0.83
BDNF-219ENST00000584049 TNS2Q63HR2 1409 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 BCL9LQ86UU0 1499 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 CTAGE9A4FU28 777 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 ERVV-2B6SEH9 535 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 PTPN21Q16825 1174 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 FILIP1LQ4L180 1135 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 HSP90AB3PQ58FF7 597 aa9.89□□□□□ -0.83
BDNF-219ENST00000584049 TAF7LQ5H9L4 462 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms