RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ERICH6Q7L0X2 663 aa25.25■■□□□ 1.63
SRSF1-206ENST00000583741 PXYLP1Q8TE99 480 aa25.25■■□□□ 1.63
SRSF1-206ENST00000583741 ALPK3Q96L96 1907 aa25.25■■□□□ 1.63
SRSF1-206ENST00000583741 TBC1D12O60347 775 aa25.24■■□□□ 1.63
SRSF1-206ENST00000583741 HMG20BQ9P0W2 317 aa25.24■■□□□ 1.63
SRSF1-206ENST00000583741 AKAP2Q9Y2D5 859 aa25.24■■□□□ 1.63
SRSF1-206ENST00000583741 MTX1Q13505 466 aa25.23■■□□□ 1.63
SRSF1-206ENST00000583741 ZBTB7BO15156 539 aaPredicted RBP25.22■■□□□ 1.63
SRSF1-206ENST00000583741 NPM3O75607 178 aaKnown RBP25.22■■□□□ 1.63
SRSF1-206ENST00000583741 TBC1D9Q6ZT07 1266 aa25.22■■□□□ 1.63
SRSF1-206ENST00000583741 NSUN4Q96CB9 384 aaKnown RBP25.22■■□□□ 1.63
SRSF1-206ENST00000583741 DEFB118Q96PH6 123 aa25.22■■□□□ 1.63
SRSF1-206ENST00000583741 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.22■■□□□ 1.63
SRSF1-206ENST00000583741 PAK6Q9NQU5 681 aaPredicted RBP25.22■■□□□ 1.63
SRSF1-206ENST00000583741 SIPA1L1O43166 1804 aa25.22■■□□□ 1.63
SRSF1-206ENST00000583741 COL2A1P02458 1487 aaPredicted RBP25.22■■□□□ 1.63
SRSF1-206ENST00000583741 COL6A3P12111 3177 aa25.22■■□□□ 1.63
SRSF1-206ENST00000583741 NEUROD6Q96NK8 337 aa25.21■■□□□ 1.63
SRSF1-206ENST00000583741 TAOK2Q9UL54 1235 aa25.21■■□□□ 1.63
SRSF1-206ENST00000583741 NR2E3Q9Y5X4 410 aa25.21■■□□□ 1.63
SRSF1-206ENST00000583741 SPP2Q13103 211 aa25.21■■□□□ 1.63
SRSF1-206ENST00000583741 RRP1BQ14684 758 aaKnown RBP25.21■■□□□ 1.63
SRSF1-206ENST00000583741 FAM110CQ1W6H9 321 aa25.21■■□□□ 1.63
SRSF1-206ENST00000583741 SPATA5Q8NB90 893 aa25.21■■□□□ 1.63
SRSF1-206ENST00000583741 PROCA1Q8NCQ7 364 aaPredicted RBP25.21■■□□□ 1.63
SRSF1-206ENST00000583741 GNAI3P08754 354 aa25.2■■□□□ 1.62
SRSF1-206ENST00000583741 OSBPL5Q9H0X9 879 aaPredicted RBP25.2■■□□□ 1.62
SRSF1-206ENST00000583741 PNMA3Q9UL41 463 aa25.2■■□□□ 1.62
SRSF1-206ENST00000583741 TFRCP02786 760 aaKnown RBP25.19■■□□□ 1.62
SRSF1-206ENST00000583741 COA7Q96BR5 231 aa25.19■■□□□ 1.62
SRSF1-206ENST00000583741 PLXNB2O15031 1838 aa25.18■■□□□ 1.62
SRSF1-206ENST00000583741 CDK5RAP2Q96SN8 1893 aa25.18■■□□□ 1.62
SRSF1-206ENST00000583741 ARID4AP29374 1257 aaPredicted RBP25.18■■□□□ 1.62
SRSF1-206ENST00000583741 HMGCS2P54868 508 aa25.18■■□□□ 1.62
SRSF1-206ENST00000583741 ZNF280CQ8ND82 737 aa25.18■■□□□ 1.62
SRSF1-206ENST00000583741 FRAT1Q92837 279 aaPredicted RBP25.18■■□□□ 1.62
SRSF1-206ENST00000583741 CRISPLD2Q9H0B8 497 aa25.18■■□□□ 1.62
SRSF1-206ENST00000583741 MAST2Q6P0Q8 1798 aa25.17■■□□□ 1.62
SRSF1-206ENST00000583741 MCAMP43121 646 aa25.17■■□□□ 1.62
SRSF1-206ENST00000583741 GSTO1P78417 241 aa25.17■■□□□ 1.62
SRSF1-206ENST00000583741 ARHGAP45Q92619 1136 aa25.17■■□□□ 1.62
SRSF1-206ENST00000583741 RAI14Q9P0K7 980 aa25.17■■□□□ 1.62
SRSF1-206ENST00000583741 EVI5O60447 810 aa25.16■■□□□ 1.62
SRSF1-206ENST00000583741 MAP4K4O95819 1239 aaPredicted RBP25.16■■□□□ 1.62
SRSF1-206ENST00000583741 LDHCP07864 332 aa25.16■■□□□ 1.62
SRSF1-206ENST00000583741 CAP2P40123 477 aa25.16■■□□□ 1.62
SRSF1-206ENST00000583741 IRX6P78412 446 aaPredicted RBP25.16■■□□□ 1.62
SRSF1-206ENST00000583741 GORABQ5T7V8 394 aa25.15■■□□□ 1.62
SRSF1-206ENST00000583741 TEX11Q8IYF3 940 aa25.15■■□□□ 1.62
SRSF1-206ENST00000583741 DIS3LQ8TF46 1054 aaKnown RBP25.15■■□□□ 1.62
SRSF1-206ENST00000583741 PAWRQ96IZ0 340 aaKnown RBP25.15■■□□□ 1.62
SRSF1-206ENST00000583741 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.15■■□□□ 1.62
SRSF1-206ENST00000583741 ASCC2Q9H1I8 757 aaPredicted RBP25.15■■□□□ 1.62
SRSF1-206ENST00000583741 TNNQ9UQP3 1299 aa25.15■■□□□ 1.62
SRSF1-206ENST00000583741 GTF3C3Q9Y5Q9 886 aa25.15■■□□□ 1.62
SRSF1-206ENST00000583741 FOCADQ5VW36 1801 aa25.15■■□□□ 1.62
SRSF1-206ENST00000583741 GCLCP48506 637 aaPredicted RBP25.15■■□□□ 1.62
SRSF1-206ENST00000583741 SH3RF3Q8TEJ3 882 aaPredicted RBP25.15■■□□□ 1.62
SRSF1-206ENST00000583741 MYO5AQ9Y4I1 1855 aaKnown RBP25.14■■□□□ 1.62
SRSF1-206ENST00000583741 PNMA6EA0A0J9YXQ4 647 aa25.14■■□□□ 1.61
SRSF1-206ENST00000583741 USP17L5A8MUK1 530 aa25.13■■□□□ 1.61
SRSF1-206ENST00000583741 CAPN2P17655 700 aa25.13■■□□□ 1.61
SRSF1-206ENST00000583741 SH3D19Q5HYK7 790 aa25.13■■□□□ 1.61
SRSF1-206ENST00000583741 ZKSCAN2Q63HK3 967 aa25.13■■□□□ 1.61
SRSF1-206ENST00000583741 TBC1D2Q9BYX2 928 aa25.13■■□□□ 1.61
SRSF1-206ENST00000583741 GJD2Q9UKL4 321 aa25.13■■□□□ 1.61
SRSF1-206ENST00000583741 HMGCRP04035 888 aa25.12■■□□□ 1.61
SRSF1-206ENST00000583741 TRIM27P14373 513 aa25.12■■□□□ 1.61
SRSF1-206ENST00000583741 TRIM32Q13049 653 aa25.12■■□□□ 1.61
SRSF1-206ENST00000583741 PABPC4Q13310 644 aaKnown RBP eCLIP25.12■■□□□ 1.61
SRSF1-206ENST00000583741 LRP2BPQ9P2M1 347 aa25.12■■□□□ 1.61
SRSF1-206ENST00000583741 HERC5Q9UII4 1024 aaKnown RBP25.12■■□□□ 1.61
SRSF1-206ENST00000583741 DDX60LQ5H9U9 1706 aaKnown RBP25.12■■□□□ 1.61
SRSF1-206ENST00000583741 SOX1O00570 391 aaPredicted RBP25.11■■□□□ 1.61
SRSF1-206ENST00000583741 IPO8O15397 1037 aaKnown RBP25.11■■□□□ 1.61
SRSF1-206ENST00000583741 JAG1P78504 1218 aa25.11■■□□□ 1.61
SRSF1-206ENST00000583741 STAP2Q9UGK3 403 aa25.11■■□□□ 1.61
SRSF1-206ENST00000583741 GNAI2P04899 355 aa25.1■■□□□ 1.61
SRSF1-206ENST00000583741 MTMR2Q13614 643 aa25.1■■□□□ 1.61
SRSF1-206ENST00000583741 DNAJC18Q9H819 358 aa25.1■■□□□ 1.61
SRSF1-206ENST00000583741 SNRKQ9NRH2 765 aa25.1■■□□□ 1.61
SRSF1-206ENST00000583741 AATFQ9NY61 560 aaKnown RBP eCLIP25.1■■□□□ 1.61
SRSF1-206ENST00000583741 A0A0C4DFX4 3053 aa25.1■■□□□ 1.61
SRSF1-206ENST00000583741 A0A1W2PPC1 479 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 PEX10O60683 326 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 UQCRFS1P1P0C7P4 283 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 G3BP1Q13283 466 aaKnown RBP eCLIP25.09■■□□□ 1.61
SRSF1-206ENST00000583741 SHROOM1Q2M3G4 852 aaPredicted RBP25.09■■□□□ 1.61
SRSF1-206ENST00000583741 NECAB2Q7Z6G3 386 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 ADGRA1Q86SQ6 560 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 AS3MTQ9HBK9 375 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 PI4KBQ9UBF8 816 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 MORF4L1Q9UBU8 362 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 C20orf194Q5TEA3 1177 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 ATF7IPQ6VMQ6 1270 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 WDR18Q9BV38 432 aa25.09■■□□□ 1.61
SRSF1-206ENST00000583741 RPTORQ8N122 1335 aa25.08■■□□□ 1.61
SRSF1-206ENST00000583741 MNX1P50219 401 aaPredicted RBP25.08■■□□□ 1.6
SRSF1-206ENST00000583741 PDE3AQ14432 1141 aa25.08■■□□□ 1.6
SRSF1-206ENST00000583741 NAA16Q6N069 864 aaPredicted RBP25.08■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms