RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 GRIK5Q16478 980 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 RTN1Q16799 776 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 GIMAP6Q6P9H5 292 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 ILDR1Q86SU0 546 aaPredicted RBP6.43□□□□□ -1.38
CRLF3-204ENST00000583527 CCDC144CPQ8IYA2 1237 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 ZNF654Q8IZM8 581 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 FLAD1Q8NFF5 587 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 TBC1D16Q8TBP0 767 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 LEO1Q8WVC0 666 aaPredicted RBP6.43□□□□□ -1.38
CRLF3-204ENST00000583527 FAM163AQ96GL9 167 aaPredicted RBP6.43□□□□□ -1.38
CRLF3-204ENST00000583527 SPATA32Q96LK8 384 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 MTA3Q9BTC8 594 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 RTFDC1Q9BY42 306 aaPredicted RBP6.43□□□□□ -1.38
CRLF3-204ENST00000583527 FTOQ9C0B1 505 aaKnown RBP eCLIP6.43□□□□□ -1.38
CRLF3-204ENST00000583527 GAKO14976 1311 aa6.43□□□□□ -1.38
CRLF3-204ENST00000583527 CCDC69A6NI79 296 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 MINDY4BA8MYZ0 360 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 ORC4O43929 436 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 DDAH1O94760 285 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 SRGNP10124 158 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 IL1R1P14778 569 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 NPR1P16066 1061 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 CDC27P30260 824 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 NASPP49321 788 aaPredicted RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 GSTO1P78417 241 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 KIF23Q02241 960 aaPredicted RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 SEC23AQ15436 765 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 CPLX2Q6PUV4 134 aaKnown RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 LRSAM1Q6UWE0 723 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 STK11IPQ8N1F8 1099 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 NLGN1Q8N2Q7 840 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 ENAHQ8N8S7 591 aaPredicted RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 BICD2Q8TD16 824 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 IGDCC4Q8TDY8 1250 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 SH3RF3Q8TEJ3 882 aaPredicted RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 ESR2Q92731 530 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 C8orf76Q96K31 380 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 ZKSCAN3Q9BRR0 538 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 SCAND2PQ9GZW5 306 aaPredicted RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 ZSCAN16Q9H4T2 348 aaPredicted RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 CD209Q9NNX6 404 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 DCP1AQ9NPI6 582 aaPredicted RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 INCENPQ9NQS7 918 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 ATP8A2Q9NTI2 1148 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 RGS17Q9UGC6 210 aaPredicted RBP6.42□□□□□ -1.38
CRLF3-204ENST00000583527 ATP6V0A2Q9Y487 856 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 SLC12A7Q9Y666 1083 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 PARP3Q9Y6F1 533 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 FAM205AQ6ZU69 1335 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 CNTNAP5Q8WYK1 1306 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 PLIN4Q96Q06 1357 aa6.42□□□□□ -1.38
CRLF3-204ENST00000583527 ERICH2A1L162 156 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 KIF28PB7ZC32 967 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 C6orf229H3BNL8 230 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 PRDM1O75626 825 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 BBOX1O75936 387 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 FMNL1O95466 1100 aaPredicted RBP6.41□□□□□ -1.38
CRLF3-204ENST00000583527 ATXN8OSP0DMR3 200 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 LIG1P18858 919 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 BTDP43251 543 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 TPRNQ4KMQ1 711 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 MFSD14BQ5SR56 506 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 OTUD7BQ6GQQ9 843 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 CTR9Q6PD62 1173 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 POTEAQ6S8J7 498 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 OLFM4Q6UX06 510 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 BRAPQ7Z569 592 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 TBC1D22AQ8WUA7 517 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 PHKBQ93100 1093 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 AIFM3Q96NN9 605 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 USP28Q96RU2 1077 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 NOL10Q9BSC4 688 aaKnown RBP6.41□□□□□ -1.38
CRLF3-204ENST00000583527 ALG1Q9BT22 464 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 TSPY26PQ9H489 355 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 FAM217BQ9NTX9 383 aaPredicted RBP6.41□□□□□ -1.38
CRLF3-204ENST00000583527 ZSWIM5Q9P217 1185 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 POLLQ9UGP5 575 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 COL4A5P29400 1685 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 FLT1P17948 1338 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 FER1L6Q2WGJ9 1857 aa6.41□□□□□ -1.38
CRLF3-204ENST00000583527 USP17L12C9JPN9 530 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 USP17L21D6R901 530 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 SLC3A2P08195 630 aaKnown RBP6.4□□□□□ -1.38
CRLF3-204ENST00000583527 FGRP09769 529 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 IFNAR1P17181 557 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 ADD1P35611 737 aaKnown RBP6.4□□□□□ -1.38
CRLF3-204ENST00000583527 PDE6BP35913 854 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 USP5P45974 858 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 NTRK3Q16288 839 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 SLC4A8Q2Y0W8 1093 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 SBK1Q52WX2 424 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 IFIT1BQ5T764 474 aaKnown RBP6.4□□□□□ -1.38
CRLF3-204ENST00000583527 DPP8Q6V1X1 898 aaPredicted RBP6.4□□□□□ -1.38
CRLF3-204ENST00000583527 IQCA1Q86XH1 822 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 C2CD5Q86YS7 1000 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 CERS3Q8IU89 383 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 MAPKAPK5Q8IW41 473 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 SP8Q8IXZ3 490 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 AMOTL1Q8IY63 956 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 TEX11Q8IYF3 940 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms