RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 G3BP1Q13283 466 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 UBE2Q1Q7Z7E8 422 aa11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 CCDC84Q86UT8 332 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 PXYLP1Q8TE99 480 aa11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 COA7Q96BR5 231 aa11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 RAI14Q9P0K7 980 aa11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-227ENST00000583352 COL2A1P02458 1487 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 FAM196BA6NMK8 535 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 SGPL1O95470 568 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 GNAI2P04899 355 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 INHAP05111 366 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 UQCRFS1P1P0C7P4 283 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 ELNP15502 786 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 CAPN2P17655 700 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 ARID4AP29374 1257 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 IRF5Q13568 498 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 PI16Q6UXB8 463 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 TBC1D9Q6ZT07 1266 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 ANKRD13CQ8N6S4 541 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 PANK1Q8TE04 598 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 ZNF384Q8TF68 577 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 NOL10Q9BSC4 688 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 NR2E3Q9Y5X4 410 aa11.91□□□□□ -0.5
CDK5RAP3-227ENST00000583352 RLBP1P12271 317 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 SPP2Q13103 211 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 PABPC4Q13310 644 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 FAM110CQ1W6H9 321 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 TREML2Q5T2D2 321 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 ZKSCAN2Q63HK3 967 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 TEX11Q8IYF3 940 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 ZNF280CQ8ND82 737 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 FRAT1Q92837 279 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 AS3MTQ9HBK9 375 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 LRP2BPQ9P2M1 347 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 TNNQ9UQP3 1299 aa11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-227ENST00000583352 USP17L5A8MUK1 530 aa11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TFRCP02786 760 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TRIM27P14373 513 aa11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 CAP2P40123 477 aa11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 MCAMP43121 646 aa11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 GCLCP48506 637 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 ATF7IPQ6VMQ6 1270 aa11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-227ENST00000583352 ATAD5Q96QE3 1844 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 LOC285556D6RIA3 1793 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 PNMA6EA0A0J9YXQ4 647 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 BAG3O95817 575 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 MS4A1P11836 297 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 PLCG2P16885 1265 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 HMGCS2P54868 508 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 SH3RF3Q8TEJ3 882 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 DEFB118Q96PH6 123 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 DHX36Q9H2U1 1008 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 RBM27Q9P2N5 1060 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 PI4KBQ9UBF8 816 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 COG6Q9Y2V7 657 aa11.88□□□□□ -0.51
CDK5RAP3-227ENST00000583352 HTTP42858 3142 aa11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 AAMPQ13685 434 aa11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 CCDC158Q5M9N0 1113 aa11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TTC39AQ5SRH9 613 aa11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 GPR108Q9NPR9 543 aa11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 PAK6Q9NQU5 681 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 MAST2Q6P0Q8 1798 aa11.87□□□□□ -0.51
CDK5RAP3-227ENST00000583352 EVI5O60447 810 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 HMGCRP04035 888 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 IRX3P78415 501 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 RRP1BQ14684 758 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 WDR18Q9BV38 432 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TRIM34Q9BYJ4 488 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 CRISPLD2Q9H0B8 497 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 ASCC2Q9H1I8 757 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 SNRKQ9NRH2 765 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 AATFQ9NY61 560 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TMOD4Q9NZQ9 345 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
CDK5RAP3-227ENST00000583352 IGSF3O75054 1194 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 ASNSP08243 561 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 PPP4CP60510 307 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 MTMR2Q13614 643 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 POLA2Q14181 598 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 MAPKAPK5Q8IW41 473 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TMEM57Q8N5G2 664 aa11.85□□□□□ -0.51
CDK5RAP3-227ENST00000583352 TGFBRAP1Q8WUH2 860 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms