RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 C19orf73Q9NVV2 129 aa7.24□□□□□ -1.25
SMCHD1-206ENST00000581631 SOWAHDA6NJG2 315 aa7.23□□□□□ -1.25
SMCHD1-206ENST00000581631 PAGE1O75459 146 aa7.23□□□□□ -1.25
SMCHD1-206ENST00000581631 IKZF1Q13422 519 aa7.23□□□□□ -1.25
SMCHD1-206ENST00000581631 ENOX2Q16206 610 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-206ENST00000581631 ANKRD24Q8TF21 1146 aa7.23□□□□□ -1.25
SMCHD1-206ENST00000581631 SLC38A3Q99624 504 aa7.23□□□□□ -1.25
SMCHD1-206ENST00000581631 SEMA3GQ9NS98 782 aa7.23□□□□□ -1.25
SMCHD1-206ENST00000581631 AKAP2Q9Y2D5 859 aa7.23□□□□□ -1.25
SMCHD1-206ENST00000581631 FANCGO15287 622 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 KCNMB1Q16558 191 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 C22orf34Q6ZV56 151 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 PPP4R2Q9NY27 417 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 FAM53CQ9NYF3 392 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 LMCD1Q9NZU5 365 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 MAPK8IP1Q9UQF2 711 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 GTF3C3Q9Y5Q9 886 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 CSADQ9Y600 493 aa7.22□□□□□ -1.25
SMCHD1-206ENST00000581631 DCDC2CA8MYV0 355 aa7.21□□□□□ -1.26
SMCHD1-206ENST00000581631 TREHO43280 583 aa7.21□□□□□ -1.26
SMCHD1-206ENST00000581631 TSPAN15O95858 294 aa7.21□□□□□ -1.26
SMCHD1-206ENST00000581631 MLANAQ16655 118 aa7.21□□□□□ -1.26
SMCHD1-206ENST00000581631 C12orf40Q86WS4 652 aa7.21□□□□□ -1.26
SMCHD1-206ENST00000581631 LIN37Q96GY3 246 aaPredicted RBP7.21□□□□□ -1.26
SMCHD1-206ENST00000581631 KRTAP4-11Q9BYQ6 195 aa7.21□□□□□ -1.26
SMCHD1-206ENST00000581631 CNTNAP4Q9C0A0 1308 aa7.21□□□□□ -1.26
SMCHD1-206ENST00000581631 PNMA6FA0A0J9YX94 578 aa7.2□□□□□ -1.26
SMCHD1-206ENST00000581631 KRT1P04264 644 aa7.2□□□□□ -1.26
SMCHD1-206ENST00000581631 ZNF865P0CJ78 1059 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-206ENST00000581631 SCARA3Q6AZY7 606 aa7.2□□□□□ -1.26
SMCHD1-206ENST00000581631 ARMCX6Q7L4S7 300 aa7.2□□□□□ -1.26
SMCHD1-206ENST00000581631 ACSBG1Q96GR2 724 aa7.2□□□□□ -1.26
SMCHD1-206ENST00000581631 CBX8Q9HC52 389 aa7.2□□□□□ -1.26
SMCHD1-206ENST00000581631 PRR33A8MZF0 331 aa7.19□□□□□ -1.26
SMCHD1-206ENST00000581631 SLITRK5O94991 958 aa7.19□□□□□ -1.26
SMCHD1-206ENST00000581631 CFPP27918 469 aa7.19□□□□□ -1.26
SMCHD1-206ENST00000581631 TPTE2Q6XPS3 522 aa7.19□□□□□ -1.26
SMCHD1-206ENST00000581631 FOXQ1Q9C009 403 aa7.19□□□□□ -1.26
SMCHD1-206ENST00000581631 DCTN4Q9UJW0 460 aa7.19□□□□□ -1.26
SMCHD1-206ENST00000581631 PPM1HQ9ULR3 514 aa7.19□□□□□ -1.26
SMCHD1-206ENST00000581631 LRIG2O94898 1065 aa7.18□□□□□ -1.26
SMCHD1-206ENST00000581631 GLI1P08151 1106 aa7.18□□□□□ -1.26
SMCHD1-206ENST00000581631 AFMP43652 599 aa7.18□□□□□ -1.26
SMCHD1-206ENST00000581631 LCNL1Q6ZST4 164 aa7.18□□□□□ -1.26
SMCHD1-206ENST00000581631 CCER1Q8TC90 406 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-206ENST00000581631 OSBPL7Q9BZF2 842 aa7.18□□□□□ -1.26
SMCHD1-206ENST00000581631 PRDM5Q9NQX1 630 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-206ENST00000581631 GNAT3A8MTJ3 354 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 GSTT1P30711 240 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 CAP2P40123 477 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 SLBPQ14493 270 aaKnown RBP eCLIP7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 LLGL2Q6P1M3 1020 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 PRR23BQ6ZRT6 265 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 RETREG2Q8NC44 543 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 KCT2Q8NC54 265 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 SRCIN1Q9C0H9 1055 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 CARS2Q9HA77 564 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 FBRSQ9HAH7 460 aa7.17□□□□□ -1.26
SMCHD1-206ENST00000581631 FBXO24O75426 580 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 INPP5AQ14642 412 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 LRFN4Q6PJG9 635 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 CYFIP1Q7L576 1253 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 HSPA12BQ96MM6 686 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 CEP44Q9C0F1 390 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 ATP13A1Q9HD20 1204 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 PCDHA4Q9UN74 947 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 ST14Q9Y5Y6 855 aa7.16□□□□□ -1.26
SMCHD1-206ENST00000581631 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 GDNFP39905 211 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 RAP1GAPP47736 663 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 PTPN11Q06124 597 aaPredicted RBP7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 FBF1Q8TES7 1133 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 GAL3ST3Q96A11 431 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 KIRREL1Q96J84 757 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 TOX2Q96NM4 488 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 PPP1R16BQ96T49 567 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 SAMM50Q9Y512 469 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 CAPN6Q9Y6Q1 641 aa7.15□□□□□ -1.26
SMCHD1-206ENST00000581631 CELA3AP09093 270 aa7.14□□□□□ -1.27
SMCHD1-206ENST00000581631 PLCB3Q01970 1234 aa7.14□□□□□ -1.27
SMCHD1-206ENST00000581631 FMR1Q06787 632 aaKnown RBP eCLIP7.14□□□□□ -1.273e-9■■■■■ 92
SMCHD1-206ENST00000581631 LRRC14Q15048 493 aa7.14□□□□□ -1.27
SMCHD1-206ENST00000581631 NPAS4Q8IUM7 802 aa7.14□□□□□ -1.27
SMCHD1-206ENST00000581631 MFSD4AQ8N468 514 aa7.14□□□□□ -1.27
SMCHD1-206ENST00000581631 ZNF507Q8TCN5 953 aa7.14□□□□□ -1.27
SMCHD1-206ENST00000581631 SETDB2Q96T68 719 aa7.14□□□□□ -1.27
SMCHD1-206ENST00000581631 CYP8B1Q9UNU6 501 aa7.14□□□□□ -1.27
SMCHD1-206ENST00000581631 NKG7Q16617 165 aa7.13□□□□□ -1.27
SMCHD1-206ENST00000581631 PCNX4Q63HM2 1172 aa7.13□□□□□ -1.27
SMCHD1-206ENST00000581631 SYDE1Q6ZW31 735 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-206ENST00000581631 CDC37L1Q7L3B6 337 aa7.13□□□□□ -1.27
SMCHD1-206ENST00000581631 LRRC56Q8IYG6 542 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-206ENST00000581631 C1QTNF9P0C862 333 aa7.12□□□□□ -1.27
SMCHD1-206ENST00000581631 SFRP5Q5T4F7 317 aa7.12□□□□□ -1.27
SMCHD1-206ENST00000581631 THAP5Q7Z6K1 395 aa7.12□□□□□ -1.27
SMCHD1-206ENST00000581631 SIAH1Q8IUQ4 282 aa7.12□□□□□ -1.27
SMCHD1-206ENST00000581631 RIN3Q8TB24 985 aa7.12□□□□□ -1.27
SMCHD1-206ENST00000581631 ELMO3Q96BJ8 720 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms