RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 ELNP15502 786 aa12.68□□□□□ -0.38
GGA3-210ENST00000580799 ARID4AP29374 1257 aaPredicted RBP12.68□□□□□ -0.38
GGA3-210ENST00000580799 FAM110CQ1W6H9 321 aa12.68□□□□□ -0.38
GGA3-210ENST00000580799 ZNF280CQ8ND82 737 aa12.68□□□□□ -0.38
GGA3-210ENST00000580799 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
GGA3-210ENST00000580799 MAST2Q6P0Q8 1798 aa12.68□□□□□ -0.38
GGA3-210ENST00000580799 UQCRFS1P1P0C7P4 283 aa12.67□□□□□ -0.38
GGA3-210ENST00000580799 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
GGA3-210ENST00000580799 CAP2P40123 477 aa12.67□□□□□ -0.38
GGA3-210ENST00000580799 SPP2Q13103 211 aa12.67□□□□□ -0.38
GGA3-210ENST00000580799 TREML2Q5T2D2 321 aa12.67□□□□□ -0.38
GGA3-210ENST00000580799 ANKRD13CQ8N6S4 541 aa12.67□□□□□ -0.38
GGA3-210ENST00000580799 NOL10Q9BSC4 688 aaKnown RBP12.67□□□□□ -0.38
GGA3-210ENST00000580799 PAK6Q9NQU5 681 aaPredicted RBP12.67□□□□□ -0.38
GGA3-210ENST00000580799 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
GGA3-210ENST00000580799 A0A1W2PPC1 479 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 FAM196BA6NMK8 535 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 USP17L5A8MUK1 530 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 TFRCP02786 760 aaKnown RBP12.66□□□□□ -0.38
GGA3-210ENST00000580799 GNAI2P04899 355 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 PI16Q6UXB8 463 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 CCDC84Q86UT8 332 aaPredicted RBP12.66□□□□□ -0.38
GGA3-210ENST00000580799 DEFB118Q96PH6 123 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
GGA3-210ENST00000580799 PRO3102Q9H379 93 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 AS3MTQ9HBK9 375 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 LRP2BPQ9P2M1 347 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.66□□□□□ -0.38
GGA3-210ENST00000580799 TRIOBPQ9H2D6 2365 aa12.66□□□□□ -0.38
GGA3-210ENST00000580799 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.38
GGA3-210ENST00000580799 EVI5O60447 810 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 IGSF3O75054 1194 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 PLCG2P16885 1265 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 MCAMP43121 646 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 HMGCS2P54868 508 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.38
GGA3-210ENST00000580799 SH3D19Q5HYK7 790 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 PI4KBQ9UBF8 816 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
GGA3-210ENST00000580799 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
GGA3-210ENST00000580799 FOCADQ5VW36 1801 aa12.65□□□□□ -0.39
GGA3-210ENST00000580799 BAG3O95817 575 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 HMGCRP04035 888 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 TRIM27P14373 513 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 ATF7IPQ6VMQ6 1270 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 ANKLE1Q8NAG6 615 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 WDR18Q9BV38 432 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
GGA3-210ENST00000580799 ASCC2Q9H1I8 757 aaPredicted RBP12.64□□□□□ -0.39
GGA3-210ENST00000580799 GPR108Q9NPR9 543 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 MORF4L1Q9UBU8 362 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 SIPA1L1O43166 1804 aa12.64□□□□□ -0.39
GGA3-210ENST00000580799 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
GGA3-210ENST00000580799 ASNSP08243 561 aa12.63□□□□□ -0.39
GGA3-210ENST00000580799 BACE1P56817 501 aa12.63□□□□□ -0.39
GGA3-210ENST00000580799 NECAB2Q7Z6G3 386 aa12.63□□□□□ -0.39
GGA3-210ENST00000580799 SH3RF3Q8TEJ3 882 aaPredicted RBP12.63□□□□□ -0.39
GGA3-210ENST00000580799 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
GGA3-210ENST00000580799 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
GGA3-210ENST00000580799 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
GGA3-210ENST00000580799 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
GGA3-210ENST00000580799 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 PPP4CP60510 307 aa12.62□□□□□ -0.39
GGA3-210ENST00000580799 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 RRP1BQ14684 758 aaKnown RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 CCDC158Q5M9N0 1113 aa12.62□□□□□ -0.39
GGA3-210ENST00000580799 NAA16Q6N069 864 aaPredicted RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 PAWRQ96IZ0 340 aaKnown RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 ZNF512BQ96KM6 892 aaPredicted RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 HMX1Q9NP08 348 aaPredicted RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
GGA3-210ENST00000580799 GJD2Q9UKL4 321 aa12.62□□□□□ -0.39
GGA3-210ENST00000580799 RANBP2P49792 3224 aaKnown RBP12.62□□□□□ -0.39
GGA3-210ENST00000580799 RPTORQ8N122 1335 aa12.62□□□□□ -0.39
GGA3-210ENST00000580799 PLXNB2O15031 1838 aa12.61□□□□□ -0.39
GGA3-210ENST00000580799 MTMR2Q13614 643 aa12.61□□□□□ -0.39
GGA3-210ENST00000580799 TNNI3KQ59H18 835 aa12.61□□□□□ -0.39
GGA3-210ENST00000580799 TTC39AQ5SRH9 613 aa12.61□□□□□ -0.39
GGA3-210ENST00000580799 METTL16Q86W50 562 aaKnown RBP12.61□□□□□ -0.39
GGA3-210ENST00000580799 CRACR2BQ8N4Y2 399 aaPredicted RBP12.61□□□□□ -0.39
GGA3-210ENST00000580799 FRAT1Q92837 279 aaPredicted RBP12.61□□□□□ -0.39
GGA3-210ENST00000580799 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
GGA3-210ENST00000580799 AATFQ9NY61 560 aaKnown RBP eCLIP12.61□□□□□ -0.39
GGA3-210ENST00000580799 FPGT-TNNI3KV9GXZ4 949 aa12.61□□□□□ -0.39
GGA3-210ENST00000580799 FLT1P17948 1338 aa12.61□□□□□ -0.39
GGA3-210ENST00000580799 DOCK3Q8IZD9 2030 aa12.61□□□□□ -0.39
GGA3-210ENST00000580799 ALPK3Q96L96 1907 aa12.6□□□□□ -0.39
GGA3-210ENST00000580799 XRCC5P13010 732 aaKnown RBP12.6□□□□□ -0.39
GGA3-210ENST00000580799 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
GGA3-210ENST00000580799 POLA2Q14181 598 aa12.6□□□□□ -0.39
GGA3-210ENST00000580799 CERS3Q8IU89 383 aa12.6□□□□□ -0.39
GGA3-210ENST00000580799 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
GGA3-210ENST00000580799 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
GGA3-210ENST00000580799 SOCS4Q8WXH5 440 aa12.6□□□□□ -0.39
GGA3-210ENST00000580799 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms